RNA–Protein interactions for RNA: ENST00000553823.5

NEK9-202, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-202ENST00000553823 TDRD15B5MCY1 1934 aaKnown RBP12.68□□□□□ -0.38
NEK9-202ENST00000553823 ALPK3Q96L96 1907 aa12.67□□□□□ -0.38
NEK9-202ENST00000553823 XPOTO43592 962 aaKnown RBP12.67□□□□□ -0.38
NEK9-202ENST00000553823 NRDCO43847 1150 aa12.67□□□□□ -0.38
NEK9-202ENST00000553823 CXCL10P02778 98 aa12.67□□□□□ -0.38
NEK9-202ENST00000553823 KCNE1P15382 129 aa12.67□□□□□ -0.38
NEK9-202ENST00000553823 TRPC3Q13507 836 aa12.67□□□□□ -0.38
NEK9-202ENST00000553823 ZBTB6Q15916 424 aa12.67□□□□□ -0.38
NEK9-202ENST00000553823 IQCEQ6IPM2 695 aa12.67□□□□□ -0.38
NEK9-202ENST00000553823 PHLDB3Q6NSJ2 640 aa12.67□□□□□ -0.38
NEK9-202ENST00000553823 PDXDC1Q6P996 788 aa12.67□□□□□ -0.38
NEK9-202ENST00000553823 GJB7Q6PEY0 223 aa12.67□□□□□ -0.38
NEK9-202ENST00000553823 SLC24A5Q71RS6 500 aa12.67□□□□□ -0.38
NEK9-202ENST00000553823 RRAGAQ7L523 313 aa12.67□□□□□ -0.38
NEK9-202ENST00000553823 RTN4RL1Q86UN2 441 aaPredicted RBP12.67□□□□□ -0.38
NEK9-202ENST00000553823 ECHDC2Q86YB7 292 aa12.67□□□□□ -0.38
NEK9-202ENST00000553823 C1orf127Q8N9H9 656 aa12.67□□□□□ -0.38
NEK9-202ENST00000553823 CCDC112Q8NEF3 446 aa12.67□□□□□ -0.38
NEK9-202ENST00000553823 LPPQ93052 612 aa12.67□□□□□ -0.38
NEK9-202ENST00000553823 ZNF830Q96NB3 372 aaPredicted RBP12.67□□□□□ -0.38
NEK9-202ENST00000553823 ZMAT2Q96NC0 199 aaKnown RBP12.67□□□□□ -0.38
NEK9-202ENST00000553823 SPAG5Q96R06 1193 aa12.67□□□□□ -0.38
NEK9-202ENST00000553823 DNAJC7Q99615 494 aa12.67□□□□□ -0.38
NEK9-202ENST00000553823 PI4K2AQ9BTU6 479 aa12.67□□□□□ -0.38
NEK9-202ENST00000553823 NAA15Q9BXJ9 866 aaKnown RBP12.67□□□□□ -0.38
NEK9-202ENST00000553823 IMPG2Q9BZV3 1241 aa12.67□□□□□ -0.38
NEK9-202ENST00000553823 CXCL16Q9H2A7 254 aa12.67□□□□□ -0.38
NEK9-202ENST00000553823 KCNF1Q9H3M0 494 aa12.67□□□□□ -0.38
NEK9-202ENST00000553823 UBE2TQ9NPD8 197 aaPredicted RBP12.67□□□□□ -0.38
NEK9-202ENST00000553823 C1orf112Q9NSG2 853 aa12.67□□□□□ -0.38
NEK9-202ENST00000553823 ABHD10Q9NUJ1 306 aa12.67□□□□□ -0.38
NEK9-202ENST00000553823 DPP3Q9NY33 737 aa12.67□□□□□ -0.38
NEK9-202ENST00000553823 DNAJC12Q9UKB3 198 aa12.67□□□□□ -0.38
NEK9-202ENST00000553823 MYO6Q9UM54 1294 aa12.67□□□□□ -0.38
NEK9-202ENST00000553823 UBQLN1Q9UMX0 589 aaKnown RBP12.67□□□□□ -0.38
NEK9-202ENST00000553823 GIT1Q9Y2X7 761 aa12.67□□□□□ -0.38
NEK9-202ENST00000553823 SMIM28A0A1B0GU29 152 aa12.66□□□□□ -0.38
NEK9-202ENST00000553823 SPDYE4A6NLX3 237 aa12.66□□□□□ -0.38
NEK9-202ENST00000553823 LRRC53A6NM62 1247 aa12.66□□□□□ -0.38
NEK9-202ENST00000553823 MEIS3P2A8K0S8 358 aa12.66□□□□□ -0.38
NEK9-202ENST00000553823 C9IYK1 514 aa12.66□□□□□ -0.38
NEK9-202ENST00000553823 KIAA0355O15063 1070 aa12.66□□□□□ -0.38
NEK9-202ENST00000553823 CST3P01034 146 aaPredicted RBP12.66□□□□□ -0.38
NEK9-202ENST00000553823 ITGB3P05106 788 aa12.66□□□□□ -0.38
NEK9-202ENST00000553823 ATF7P17544 494 aaPredicted RBP12.66□□□□□ -0.38
NEK9-202ENST00000553823 RFC2P35250 354 aa12.66□□□□□ -0.38
NEK9-202ENST00000553823 FAM189BP81408 668 aa12.66□□□□□ -0.38
NEK9-202ENST00000553823 RAPGEF1Q13905 1077 aa12.66□□□□□ -0.38
NEK9-202ENST00000553823 SGSM1Q2NKQ1 1148 aa12.66□□□□□ -0.38
NEK9-202ENST00000553823 GLRA4Q5JXX5 417 aa12.66□□□□□ -0.38
NEK9-202ENST00000553823 AGMOQ6ZNB7 445 aa12.66□□□□□ -0.38
NEK9-202ENST00000553823 ZNF598Q86UK7 904 aaKnown RBP12.66□□□□□ -0.38
NEK9-202ENST00000553823 ARHGEF19Q8IW93 802 aa12.66□□□□□ -0.38
NEK9-202ENST00000553823 PPM1KQ8N3J5 372 aa12.66□□□□□ -0.38
NEK9-202ENST00000553823 BEST2Q8NFU1 509 aa12.66□□□□□ -0.38
NEK9-202ENST00000553823 LINC01599Q8WXQ3 324 aa12.66□□□□□ -0.38
NEK9-202ENST00000553823 TATDN2Q93075 761 aa12.66□□□□□ -0.38
NEK9-202ENST00000553823 FAM81BQ96LP2 452 aa12.66□□□□□ -0.38
NEK9-202ENST00000553823 RPS6KC1Q96S38 1066 aa12.66□□□□□ -0.38
NEK9-202ENST00000553823 STK33Q9BYT3 514 aa12.66□□□□□ -0.38
NEK9-202ENST00000553823 UBN1Q9NPG3 1134 aa12.66□□□□□ -0.38
NEK9-202ENST00000553823 PRDM5Q9NQX1 630 aaPredicted RBP12.66□□□□□ -0.38
NEK9-202ENST00000553823 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.66□□□□□ -0.38
NEK9-202ENST00000553823 ZNHIT6Q9NWK9 470 aaKnown RBP12.66□□□□□ -0.38
NEK9-202ENST00000553823 SIX4Q9UIU6 781 aa12.66□□□□□ -0.38
NEK9-202ENST00000553823 AJAP1Q9UKB5 411 aaPredicted RBP12.66□□□□□ -0.38
NEK9-202ENST00000553823 ITGA11Q9UKX5 1188 aa12.66□□□□□ -0.38
NEK9-202ENST00000553823 R3HCC1Q9Y3T6 440 aaKnown RBP12.66□□□□□ -0.38
NEK9-202ENST00000553823 ENPP3O14638 875 aa12.65□□□□□ -0.38
NEK9-202ENST00000553823 CLSTN1O94985 981 aa12.65□□□□□ -0.38
NEK9-202ENST00000553823 EOMESO95936 686 aa12.65□□□□□ -0.38
NEK9-202ENST00000553823 ASS1P00966 412 aaKnown RBP12.65□□□□□ -0.38
NEK9-202ENST00000553823 TIMP1P01033 207 aa12.65□□□□□ -0.38
NEK9-202ENST00000553823 KRT19P08727 400 aa12.65□□□□□ -0.38
NEK9-202ENST00000553823 IBSPP21815 317 aaPredicted RBP12.65□□□□□ -0.38
NEK9-202ENST00000553823 FECHP22830 423 aa12.65□□□□□ -0.38
NEK9-202ENST00000553823 HNRNPH3P31942 346 aaKnown RBP12.65□□□□□ -0.38
NEK9-202ENST00000553823 MLH1P40692 756 aa12.65□□□□□ -0.38
NEK9-202ENST00000553823 MFAP3P55082 362 aa12.65□□□□□ -0.38
NEK9-202ENST00000553823 JAM2P57087 298 aa12.65□□□□□ -0.38
NEK9-202ENST00000553823 MYL6P60660 151 aa12.65□□□□□ -0.38
NEK9-202ENST00000553823 NOP14P78316 857 aaKnown RBP12.65□□□□□ -0.38
NEK9-202ENST00000553823 RBP5P82980 135 aa12.65□□□□□ -0.38
NEK9-202ENST00000553823 CCZ1BP86790 482 aa12.65□□□□□ -0.38
NEK9-202ENST00000553823 CCZ1P86791 482 aaPredicted RBP12.65□□□□□ -0.38
NEK9-202ENST00000553823 GCNT1Q02742 428 aa12.65□□□□□ -0.38
NEK9-202ENST00000553823 DRAP1Q14919 205 aaPredicted RBP12.65□□□□□ -0.38
NEK9-202ENST00000553823 ZNF699Q32M78 642 aa12.65□□□□□ -0.38
NEK9-202ENST00000553823 SFMBT2Q5VUG0 894 aa12.65□□□□□ -0.38
NEK9-202ENST00000553823 SCARA3Q6AZY7 606 aa12.65□□□□□ -0.38
NEK9-202ENST00000553823 ENOSF1Q7L5Y1 443 aa12.65□□□□□ -0.38
NEK9-202ENST00000553823 DEFB128Q7Z7B8 93 aa12.65□□□□□ -0.38
NEK9-202ENST00000553823 RNF169Q8NCN4 708 aa12.65□□□□□ -0.38
NEK9-202ENST00000553823 CXorf38Q8TB03 319 aa12.65□□□□□ -0.38
NEK9-202ENST00000553823 HELQQ8TDG4 1101 aa12.65□□□□□ -0.38
NEK9-202ENST00000553823 TAF4BQ92750 862 aa12.65□□□□□ -0.38
NEK9-202ENST00000553823 SYN2Q92777 582 aaPredicted RBP12.65□□□□□ -0.38
NEK9-202ENST00000553823 ZFP42Q96MM3 310 aa12.65□□□□□ -0.38
NEK9-202ENST00000553823 GAD1Q99259 594 aa12.65□□□□□ -0.38
NEK9-202ENST00000553823 BAG1Q99933 345 aaPredicted RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms