RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 PHF7Q9BWX1 381 aaPredicted RBP25.69■■□□□ 1.7
TDP1-205ENST00000553527 FGFBP2Q9BYJ0 223 aa25.69■■□□□ 1.7
TDP1-205ENST00000553527 PLEKHA5Q9HAU0 1116 aa25.69■■□□□ 1.7
TDP1-205ENST00000553527 MAN1C1Q9NR34 630 aa25.69■■□□□ 1.7
TDP1-205ENST00000553527 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP25.69■■□□□ 1.7
TDP1-205ENST00000553527 TUBGCP4Q9UGJ1 667 aa25.69■■□□□ 1.7
TDP1-205ENST00000553527 PCDHB13Q9Y5F0 798 aa25.69■■□□□ 1.7
TDP1-205ENST00000553527 TTC26A0AVF1 554 aa25.68■■□□□ 1.7
TDP1-205ENST00000553527 C19orf67A6NJJ6 358 aa25.68■■□□□ 1.7
TDP1-205ENST00000553527 TMEM189-UBE2V1I3L0A0 370 aa25.68■■□□□ 1.7
TDP1-205ENST00000553527 TRAPPC3O43617 180 aa25.68■■□□□ 1.7
TDP1-205ENST00000553527 PPP1R37O75864 691 aa25.68■■□□□ 1.7
TDP1-205ENST00000553527 GLUD1P00367 558 aa25.68■■□□□ 1.7
TDP1-205ENST00000553527 PFKFB1P16118 471 aa25.68■■□□□ 1.7
TDP1-205ENST00000553527 CASP1P29466 404 aa25.68■■□□□ 1.7
TDP1-205ENST00000553527 AFMP43652 599 aa25.68■■□□□ 1.7
TDP1-205ENST00000553527 ASIC1P78348 528 aa25.68■■□□□ 1.7
TDP1-205ENST00000553527 ENOX2Q16206 610 aaKnown RBP25.68■■□□□ 1.7
TDP1-205ENST00000553527 PSMD5Q16401 504 aa25.68■■□□□ 1.7
TDP1-205ENST00000553527 SLFN12LQ6IEE8 588 aa25.68■■□□□ 1.7
TDP1-205ENST00000553527 CLEC17AQ6ZS10 378 aa25.68■■□□□ 1.7
TDP1-205ENST00000553527 FSIP1Q8NA03 581 aa25.68■■□□□ 1.7
TDP1-205ENST00000553527 LNX1Q8TBB1 728 aaPredicted RBP25.68■■□□□ 1.7
TDP1-205ENST00000553527 HVCN1Q96D96 273 aa25.68■■□□□ 1.7
TDP1-205ENST00000553527 TRIM9Q9C026 710 aa25.68■■□□□ 1.7
TDP1-205ENST00000553527 OLFML3Q9NRN5 406 aa25.68■■□□□ 1.7
TDP1-205ENST00000553527 AGO2Q9UKV8 859 aaKnown RBP25.68■■□□□ 1.7
TDP1-205ENST00000553527 KCNH3Q9ULD8 1083 aa25.68■■□□□ 1.7
TDP1-205ENST00000553527 EXOC7Q9UPT5 735 aa25.68■■□□□ 1.7
TDP1-205ENST00000553527 NUB1Q9Y5A7 615 aa25.68■■□□□ 1.7
TDP1-205ENST00000553527 ANK1P16157 1881 aa25.68■■□□□ 1.7
TDP1-205ENST00000553527 A0A1B0GVL5 298 aa25.67■■□□□ 1.7
TDP1-205ENST00000553527 FRMD3A2A2Y4 597 aa25.67■■□□□ 1.7
TDP1-205ENST00000553527 FAM189A1O60320 539 aa25.67■■□□□ 1.7
TDP1-205ENST00000553527 PRPF6O94906 941 aaKnown RBP25.67■■□□□ 1.7
TDP1-205ENST00000553527 ATAT1Q5SQI0 421 aa25.67■■□□□ 1.7
TDP1-205ENST00000553527 L1TD1Q5T7N2 865 aaKnown RBP25.67■■□□□ 1.7
TDP1-205ENST00000553527 PYM1Q9BRP8 204 aaKnown RBP25.67■■□□□ 1.7
TDP1-205ENST00000553527 STRA6Q9BX79 667 aa25.67■■□□□ 1.7
TDP1-205ENST00000553527 BLZF1Q9H2G9 400 aa25.67■■□□□ 1.7
TDP1-205ENST00000553527 SFXN1Q9H9B4 322 aa25.67■■□□□ 1.7
TDP1-205ENST00000553527 FNIP2Q9P278 1114 aa25.67■■□□□ 1.7
TDP1-205ENST00000553527 CPSF3Q9UKF6 684 aaKnown RBP25.67■■□□□ 1.7
TDP1-205ENST00000553527 C2orf16Q68DN1 1984 aa25.67■■□□□ 1.7
TDP1-205ENST00000553527 TGM5O43548 720 aa25.66■■□□□ 1.7
TDP1-205ENST00000553527 TKTP29401 623 aaKnown RBP25.66■■□□□ 1.7
TDP1-205ENST00000553527 RPL9P32969 192 aaKnown RBP25.66■■□□□ 1.7
TDP1-205ENST00000553527 CREMQ03060 361 aa25.66■■□□□ 1.7
TDP1-205ENST00000553527 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.66■■□□□ 1.7
TDP1-205ENST00000553527 NOC3LQ8WTT2 800 aaKnown RBP25.66■■□□□ 1.7
TDP1-205ENST00000553527 PIK3R5Q8WYR1 880 aa25.66■■□□□ 1.7
TDP1-205ENST00000553527 RIPOR3Q96MK2 946 aa25.66■■□□□ 1.7
TDP1-205ENST00000553527 CLSTN3Q9BQT9 956 aa25.66■■□□□ 1.7
TDP1-205ENST00000553527 POMKQ9H5K3 350 aa25.66■■□□□ 1.7
TDP1-205ENST00000553527 GUCY2FP51841 1108 aa25.65■■□□□ 1.7
TDP1-205ENST00000553527 GPR65Q8IYL9 337 aa25.65■■□□□ 1.7
TDP1-205ENST00000553527 GLIS3Q8NEA6 775 aa25.65■■□□□ 1.7
TDP1-205ENST00000553527 SERTAD1Q9UHV2 236 aa25.65■■□□□ 1.7
TDP1-205ENST00000553527 HPSEQ9Y251 543 aa25.65■■□□□ 1.7
TDP1-205ENST00000553527 STYXL1Q9Y6J8 313 aa25.65■■□□□ 1.7
TDP1-205ENST00000553527 CCDC195A0A1B0GUA6 201 aa25.64■■□□□ 1.7
TDP1-205ENST00000553527 ADAM12O43184 909 aa25.64■■□□□ 1.7
TDP1-205ENST00000553527 RFPL2O75678 378 aa25.64■■□□□ 1.7
TDP1-205ENST00000553527 FGFR3P22607 806 aa25.64■■□□□ 1.7
TDP1-205ENST00000553527 ADSSP30520 456 aa25.64■■□□□ 1.7
TDP1-205ENST00000553527 MCM4P33991 863 aa25.64■■□□□ 1.7
TDP1-205ENST00000553527 MTHFRP42898 656 aa25.64■■□□□ 1.7
TDP1-205ENST00000553527 POSTNQ15063 836 aa25.64■■□□□ 1.7
TDP1-205ENST00000553527 JADE1Q6IE81 842 aa25.64■■□□□ 1.7
TDP1-205ENST00000553527 ELMSAN1Q6PJG2 1045 aa25.64■■□□□ 1.7
TDP1-205ENST00000553527 RNF135Q8IUD6 432 aa25.64■■□□□ 1.7
TDP1-205ENST00000553527 GRAMD1CQ8IYS0 662 aa25.64■■□□□ 1.7
TDP1-205ENST00000553527 CEP57L1Q8IYX8 460 aa25.64■■□□□ 1.7
TDP1-205ENST00000553527 C7orf25Q9BPX7 421 aa25.64■■□□□ 1.7
TDP1-205ENST00000553527 GOLPH3LQ9H4A5 285 aa25.64■■□□□ 1.7
TDP1-205ENST00000553527 DPP7Q9UHL4 492 aa25.64■■□□□ 1.7
TDP1-205ENST00000553527 UBQLN1Q9UMX0 589 aaKnown RBP25.64■■□□□ 1.7
TDP1-205ENST00000553527 FAM237AA0A1B0GTK4 181 aa25.63■■□□□ 1.69
TDP1-205ENST00000553527 OR1D2P34982 312 aa25.63■■□□□ 1.69
TDP1-205ENST00000553527 NDUFA8P51970 172 aa25.63■■□□□ 1.69
TDP1-205ENST00000553527 ALCAMQ13740 583 aa25.63■■□□□ 1.69
TDP1-205ENST00000553527 ZBTB6Q15916 424 aa25.63■■□□□ 1.69
TDP1-205ENST00000553527 PDXDC1Q6P996 788 aa25.63■■□□□ 1.69
TDP1-205ENST00000553527 SAAL1Q96ER3 474 aa25.63■■□□□ 1.69
TDP1-205ENST00000553527 NECTIN4Q96NY8 510 aa25.63■■□□□ 1.69
TDP1-205ENST00000553527 FAM213AQ9BRX8 229 aa25.63■■□□□ 1.69
TDP1-205ENST00000553527 PCIF1Q9H4Z3 704 aa25.63■■□□□ 1.69
TDP1-205ENST00000553527 MAGEF1Q9HAY2 307 aa25.63■■□□□ 1.69
TDP1-205ENST00000553527 MYO10Q9HD67 2058 aa25.63■■□□□ 1.69
TDP1-205ENST00000553527 LOC730098B7Z3J9 87 aa25.62■■□□□ 1.69
TDP1-205ENST00000553527 XPOTO43592 962 aaKnown RBP25.62■■□□□ 1.69
TDP1-205ENST00000553527 SYKP43405 635 aa25.62■■□□□ 1.69
TDP1-205ENST00000553527 CUL4BQ13620 913 aa25.62■■□□□ 1.69
TDP1-205ENST00000553527 LILRA6Q6PI73 481 aa25.62■■□□□ 1.69
TDP1-205ENST00000553527 STXBP4Q6ZWJ1 553 aa25.62■■□□□ 1.69
TDP1-205ENST00000553527 GPR149Q86SP6 731 aa25.62■■□□□ 1.69
TDP1-205ENST00000553527 KREMEN2Q8NCW0 462 aa25.62■■□□□ 1.69
TDP1-205ENST00000553527 ZSWIM2Q8NEG5 633 aa25.62■■□□□ 1.69
TDP1-205ENST00000553527 MUTYHQ9UIF7 546 aa25.62■■□□□ 1.69
TDP1-205ENST00000553527 CDY1Q9Y6F8 540 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms