RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 TRPC3Q13507 836 aa18.94■□□□□ 0.62
PSEN1-206ENST00000553447 TMEM132DQ14C87 1099 aa18.94■□□□□ 0.62
PSEN1-206ENST00000553447 SCARA3Q6AZY7 606 aa18.94■□□□□ 0.62
PSEN1-206ENST00000553447 SMG8Q8ND04 991 aaKnown RBP18.94■□□□□ 0.62
PSEN1-206ENST00000553447 CAGE1Q8TC20 777 aa18.94■□□□□ 0.62
PSEN1-206ENST00000553447 U2AF1L4Q8WU68 220 aaKnown RBP18.94■□□□□ 0.62
PSEN1-206ENST00000553447 ELMO3Q96BJ8 720 aa18.94■□□□□ 0.62
PSEN1-206ENST00000553447 PPP1R13BQ96KQ4 1090 aa18.94■□□□□ 0.62
PSEN1-206ENST00000553447 APOL6Q9BWW8 343 aa18.94■□□□□ 0.62
PSEN1-206ENST00000553447 APOBEC3GQ9HC16 384 aaKnown RBP18.94■□□□□ 0.62
PSEN1-206ENST00000553447 PADI3Q9ULW8 664 aa18.94■□□□□ 0.62
PSEN1-206ENST00000553447 BZW2Q9Y6E2 419 aaKnown RBP18.94■□□□□ 0.62
PSEN1-206ENST00000553447 TANC1Q9C0D5 1861 aa18.93■□□□□ 0.62
PSEN1-206ENST00000553447 EIF3CLB5ME19 914 aaKnown RBP18.93■□□□□ 0.62
PSEN1-206ENST00000553447 FOXN3O00409 490 aaPredicted RBP18.93■□□□□ 0.62
PSEN1-206ENST00000553447 EVI5O60447 810 aa18.93■□□□□ 0.62
PSEN1-206ENST00000553447 ASS1P00966 412 aaKnown RBP18.93■□□□□ 0.62
PSEN1-206ENST00000553447 MNX1P50219 401 aaPredicted RBP18.93■□□□□ 0.62
PSEN1-206ENST00000553447 KIF11P52732 1056 aa18.93■□□□□ 0.62
PSEN1-206ENST00000553447 MYL6P60660 151 aa18.93■□□□□ 0.62
PSEN1-206ENST00000553447 NOP14P78316 857 aaKnown RBP18.93■□□□□ 0.62
PSEN1-206ENST00000553447 ASTE1Q2TB18 679 aaPredicted RBP18.93■□□□□ 0.62
PSEN1-206ENST00000553447 SPOPLQ6IQ16 392 aa18.93■□□□□ 0.62
PSEN1-206ENST00000553447 ALKAL1Q6UXT8 129 aa18.93■□□□□ 0.62
PSEN1-206ENST00000553447 ACRBPQ8NEB7 543 aa18.93■□□□□ 0.62
PSEN1-206ENST00000553447 SHC3Q92529 594 aa18.93■□□□□ 0.62
PSEN1-206ENST00000553447 KIF12Q96FN5 646 aa18.93■□□□□ 0.62
PSEN1-206ENST00000553447 EIF3CQ99613 913 aaKnown RBP18.93■□□□□ 0.62
PSEN1-206ENST00000553447 IMPG2Q9BZV3 1241 aa18.93■□□□□ 0.62
PSEN1-206ENST00000553447 DEF6Q9H4E7 631 aa18.93■□□□□ 0.62
PSEN1-206ENST00000553447 HAUS4Q9H6D7 363 aa18.93■□□□□ 0.62
PSEN1-206ENST00000553447 CNTN3Q9P232 1028 aa18.93■□□□□ 0.62
PSEN1-206ENST00000553447 AKR1B10O60218 316 aa18.92■□□□□ 0.62
PSEN1-206ENST00000553447 CCDC172P0C7W6 258 aa18.92■□□□□ 0.62
PSEN1-206ENST00000553447 ZSCAN20P17040 1043 aaPredicted RBP18.92■□□□□ 0.62
PSEN1-206ENST00000553447 AKAP5P24588 427 aa18.92■□□□□ 0.62
PSEN1-206ENST00000553447 DSC3Q14574 896 aa18.92■□□□□ 0.62
PSEN1-206ENST00000553447 SGSM1Q2NKQ1 1148 aa18.92■□□□□ 0.62
PSEN1-206ENST00000553447 XKR4Q5GH76 650 aa18.92■□□□□ 0.62
PSEN1-206ENST00000553447 REXO1L1PQ8IX06 675 aa18.92■□□□□ 0.62
PSEN1-206ENST00000553447 C1orf127Q8N9H9 656 aa18.92■□□□□ 0.62
PSEN1-206ENST00000553447 CXCL16Q9H2A7 254 aa18.92■□□□□ 0.62
PSEN1-206ENST00000553447 FAM105AQ9NUU6 356 aa18.92■□□□□ 0.62
PSEN1-206ENST00000553447 PARP2Q9UGN5 583 aa18.92■□□□□ 0.62
PSEN1-206ENST00000553447 SIX4Q9UIU6 781 aa18.92■□□□□ 0.62
PSEN1-206ENST00000553447 REXO2Q9Y3B8 237 aaKnown RBP18.92■□□□□ 0.62
PSEN1-206ENST00000553447 NUB1Q9Y5A7 615 aa18.92■□□□□ 0.62
PSEN1-206ENST00000553447 PCDHB2Q9Y5E7 798 aa18.92■□□□□ 0.62
PSEN1-206ENST00000553447 CENPFP49454 3210 aa18.92■□□□□ 0.62
PSEN1-206ENST00000553447 TLR3O15455 904 aaKnown RBP18.91■□□□□ 0.62
PSEN1-206ENST00000553447 LCA5LO95447 670 aa18.91■□□□□ 0.62
PSEN1-206ENST00000553447 ITGB3P05106 788 aa18.91■□□□□ 0.62
PSEN1-206ENST00000553447 TBXAS1P24557 533 aaPredicted RBP18.91■□□□□ 0.62
PSEN1-206ENST00000553447 ANXA13P27216 316 aa18.91■□□□□ 0.62
PSEN1-206ENST00000553447 PTK2Q05397 1052 aa18.91■□□□□ 0.62
PSEN1-206ENST00000553447 BFSP2Q13515 415 aa18.91■□□□□ 0.62
PSEN1-206ENST00000553447 CUL2Q13617 745 aa18.91■□□□□ 0.62
PSEN1-206ENST00000553447 SLC39A5Q6ZMH5 540 aa18.91■□□□□ 0.62
PSEN1-206ENST00000553447 FAM71AQ8IYT1 594 aa18.91■□□□□ 0.62
PSEN1-206ENST00000553447 HACE1Q8IYU2 909 aa18.91■□□□□ 0.62
PSEN1-206ENST00000553447 CXorf38Q8TB03 319 aa18.91■□□□□ 0.62
PSEN1-206ENST00000553447 TAF4BQ92750 862 aa18.91■□□□□ 0.62
PSEN1-206ENST00000553447 JAKMIP2Q96AA8 810 aa18.91■□□□□ 0.62
PSEN1-206ENST00000553447 ZMAT2Q96NC0 199 aaKnown RBP18.91■□□□□ 0.62
PSEN1-206ENST00000553447 TSPAN18Q96SJ8 248 aa18.91■□□□□ 0.62
PSEN1-206ENST00000553447 XYLT2Q9H1B5 865 aa18.91■□□□□ 0.62
PSEN1-206ENST00000553447 RNF39Q9H2S5 420 aa18.91■□□□□ 0.62
PSEN1-206ENST00000553447 DPP3Q9NY33 737 aa18.91■□□□□ 0.62
PSEN1-206ENST00000553447 ITGA11Q9UKX5 1188 aa18.91■□□□□ 0.62
PSEN1-206ENST00000553447 GOLGA6L9A6NEM1 432 aa18.9■□□□□ 0.62
PSEN1-206ENST00000553447 MGEA5O60502 916 aa18.9■□□□□ 0.62
PSEN1-206ENST00000553447 CLSTN1O94985 981 aa18.9■□□□□ 0.62
PSEN1-206ENST00000553447 IPO7O95373 1038 aaKnown RBP18.9■□□□□ 0.62
PSEN1-206ENST00000553447 KRT19P08727 400 aa18.9■□□□□ 0.62
PSEN1-206ENST00000553447 SELPP16109 830 aa18.9■□□□□ 0.62
PSEN1-206ENST00000553447 KRT83P78385 493 aa18.9■□□□□ 0.62
PSEN1-206ENST00000553447 MBTPS1Q14703 1052 aa18.9■□□□□ 0.62
PSEN1-206ENST00000553447 ZBTB6Q15916 424 aa18.9■□□□□ 0.62
PSEN1-206ENST00000553447 ZNF699Q32M78 642 aa18.9■□□□□ 0.62
PSEN1-206ENST00000553447 LRRC8DQ7L1W4 858 aa18.9■□□□□ 0.62
PSEN1-206ENST00000553447 ZNF571Q7Z3V5 609 aaPredicted RBP18.9■□□□□ 0.62
PSEN1-206ENST00000553447 ARID3AQ99856 593 aa18.9■□□□□ 0.62
PSEN1-206ENST00000553447 TRAIPQ9BWF2 469 aa18.9■□□□□ 0.62
PSEN1-206ENST00000553447 KLK14Q9P0G3 267 aa18.9■□□□□ 0.62
PSEN1-206ENST00000553447 UMODL1Q5DID0 1318 aa18.9■□□□□ 0.62
PSEN1-206ENST00000553447 ZNF263O14978 683 aa18.89■□□□□ 0.61
PSEN1-206ENST00000553447 PQBP1O60828 265 aaKnown RBP18.89■□□□□ 0.61
PSEN1-206ENST00000553447 COL6A1P12109 1028 aa18.89■□□□□ 0.61
PSEN1-206ENST00000553447 ITGA4P13612 1032 aa18.89■□□□□ 0.61
PSEN1-206ENST00000553447 KCNE1P15382 129 aa18.89■□□□□ 0.61
PSEN1-206ENST00000553447 POLR2BP30876 1174 aaKnown RBP18.89■□□□□ 0.61
PSEN1-206ENST00000553447 ATICP31939 592 aa18.89■□□□□ 0.61
PSEN1-206ENST00000553447 USP8P40818 1118 aa18.89■□□□□ 0.61
PSEN1-206ENST00000553447 GJA8P48165 433 aa18.89■□□□□ 0.61
PSEN1-206ENST00000553447 RAB27AP51159 221 aa18.89■□□□□ 0.61
PSEN1-206ENST00000553447 GUCY2FP51841 1108 aa18.89■□□□□ 0.61
PSEN1-206ENST00000553447 ATN1P54259 1190 aaPredicted RBP18.89■□□□□ 0.61
PSEN1-206ENST00000553447 SPA17Q15506 151 aa18.89■□□□□ 0.61
PSEN1-206ENST00000553447 ANKRD33Q7Z3H0 272 aa18.89■□□□□ 0.61
PSEN1-206ENST00000553447 MRPL10Q7Z7H8 261 aaKnown RBP18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms