RNA–Protein interactions for RNA: ENST00000552812.1

CACNB3-224, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

Gene CACNB3, Length 1,712 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-224ENST00000552812 FRMPD3Q5JV73 1810 aa12.15□□□□□ -0.46
CACNB3-224ENST00000552812 GRIN2DO15399 1336 aa12.15□□□□□ -0.46
CACNB3-224ENST00000552812 HTTP42858 3142 aa12.14□□□□□ -0.47
CACNB3-224ENST00000552812 PHACTR2O75167 634 aa12.14□□□□□ -0.47
CACNB3-224ENST00000552812 VNN1O95497 513 aa12.14□□□□□ -0.47
CACNB3-224ENST00000552812 CXCL8P10145 99 aa12.14□□□□□ -0.47
CACNB3-224ENST00000552812 FGFR4P22455 802 aa12.14□□□□□ -0.47
CACNB3-224ENST00000552812 VAV2P52735 878 aa12.14□□□□□ -0.47
CACNB3-224ENST00000552812 OSTNP61366 133 aa12.14□□□□□ -0.47
CACNB3-224ENST00000552812 ITGA7Q13683 1181 aa12.14□□□□□ -0.47
CACNB3-224ENST00000552812 NCOA4Q13772 614 aa12.14□□□□□ -0.47
CACNB3-224ENST00000552812 ARHGAP44Q17R89 818 aa12.14□□□□□ -0.47
CACNB3-224ENST00000552812 KIAA1328Q86T90 577 aa12.14□□□□□ -0.47
CACNB3-224ENST00000552812 NT5DC4Q86YG4 428 aa12.14□□□□□ -0.47
CACNB3-224ENST00000552812 SHC3Q92529 594 aa12.14□□□□□ -0.47
CACNB3-224ENST00000552812 ANKRD36BP1Q96IX9 119 aa12.14□□□□□ -0.47
CACNB3-224ENST00000552812 GLT1D1Q96MS3 346 aa12.14□□□□□ -0.47
CACNB3-224ENST00000552812 ACAP3Q96P50 834 aa12.14□□□□□ -0.47
CACNB3-224ENST00000552812 IFIH1Q9BYX4 1025 aaKnown RBP12.14□□□□□ -0.47
CACNB3-224ENST00000552812 IMPG2Q9BZV3 1241 aa12.14□□□□□ -0.47
CACNB3-224ENST00000552812 TSGA10Q9BZW7 698 aa12.14□□□□□ -0.47
CACNB3-224ENST00000552812 TRPV2Q9Y5S1 764 aa12.14□□□□□ -0.47
CACNB3-224ENST00000552812 MROH7Q68CQ1 1323 aa12.14□□□□□ -0.47
CACNB3-224ENST00000552812 FOXN3O00409 490 aaPredicted RBP12.14□□□□□ -0.47
CACNB3-224ENST00000552812 ZNF263O14978 683 aa12.14□□□□□ -0.47
CACNB3-224ENST00000552812 KRT86O43790 486 aa12.14□□□□□ -0.47
CACNB3-224ENST00000552812 TNNC2P02585 160 aa12.14□□□□□ -0.47
CACNB3-224ENST00000552812 TMEM191BP0C7N4 346 aa12.14□□□□□ -0.47
CACNB3-224ENST00000552812 TBXAS1P24557 533 aaPredicted RBP12.14□□□□□ -0.47
CACNB3-224ENST00000552812 ARHGAP25P42331 645 aa12.14□□□□□ -0.47
CACNB3-224ENST00000552812 GFPT1Q06210 699 aaPredicted RBP12.14□□□□□ -0.47
CACNB3-224ENST00000552812 BMS1Q14692 1282 aaKnown RBP12.14□□□□□ -0.47
CACNB3-224ENST00000552812 PTGISQ16647 500 aa12.14□□□□□ -0.47
CACNB3-224ENST00000552812 C10orf76Q5T2E6 689 aa12.14□□□□□ -0.47
CACNB3-224ENST00000552812 TRAPPC11Q7Z392 1133 aa12.14□□□□□ -0.47
CACNB3-224ENST00000552812 EFCAB13Q8IY85 973 aa12.14□□□□□ -0.47
CACNB3-224ENST00000552812 TMEM192Q8IY95 271 aa12.14□□□□□ -0.47
CACNB3-224ENST00000552812 FAM71AQ8IYT1 594 aa12.14□□□□□ -0.47
CACNB3-224ENST00000552812 ARRDC4Q8NCT1 418 aa12.14□□□□□ -0.47
CACNB3-224ENST00000552812 KREMEN1Q96MU8 473 aa12.14□□□□□ -0.47
CACNB3-224ENST00000552812 CCDC94Q9BW85 323 aaPredicted RBP12.14□□□□□ -0.47
CACNB3-224ENST00000552812 MTMR12Q9C0I1 747 aa12.14□□□□□ -0.47
CACNB3-224ENST00000552812 PLEKHA5Q9HAU0 1116 aa12.14□□□□□ -0.47
CACNB3-224ENST00000552812 LZTFL1Q9NQ48 299 aa12.14□□□□□ -0.47
CACNB3-224ENST00000552812 MYO1AQ9UBC5 1043 aa12.14□□□□□ -0.47
CACNB3-224ENST00000552812 C2CD2Q9Y426 696 aa12.14□□□□□ -0.47
CACNB3-224ENST00000552812 PCDHA13Q9Y5I0 950 aa12.14□□□□□ -0.47
CACNB3-224ENST00000552812 CDY2AQ9Y6F7 541 aa12.14□□□□□ -0.47
CACNB3-224ENST00000552812 ATP8B3O60423 1300 aa12.13□□□□□ -0.47
CACNB3-224ENST00000552812 KIF5CO60282 957 aa12.13□□□□□ -0.47
CACNB3-224ENST00000552812 ASS1P00966 412 aaKnown RBP12.13□□□□□ -0.47
CACNB3-224ENST00000552812 HSPA6P17066 643 aa12.13□□□□□ -0.47
CACNB3-224ENST00000552812 TFAMQ00059 246 aaKnown RBP12.13□□□□□ -0.47
CACNB3-224ENST00000552812 CYP27A1Q02318 531 aa12.13□□□□□ -0.47
CACNB3-224ENST00000552812 KIF5AQ12840 1032 aa12.13□□□□□ -0.47
CACNB3-224ENST00000552812 PTK7Q13308 1070 aa12.13□□□□□ -0.47
CACNB3-224ENST00000552812 SGSM1Q2NKQ1 1148 aa12.13□□□□□ -0.47
CACNB3-224ENST00000552812 SLC10A6Q3KNW5 377 aa12.13□□□□□ -0.47
CACNB3-224ENST00000552812 ZNF571Q7Z3V5 609 aaPredicted RBP12.13□□□□□ -0.47
CACNB3-224ENST00000552812 PLPP6Q8IY26 295 aa12.13□□□□□ -0.47
CACNB3-224ENST00000552812 KIF18AQ8NI77 898 aa12.13□□□□□ -0.47
CACNB3-224ENST00000552812 FAXDC2Q96IV6 333 aa12.13□□□□□ -0.47
CACNB3-224ENST00000552812 SYT11Q9BT88 431 aa12.13□□□□□ -0.47
CACNB3-224ENST00000552812 PI4K2AQ9BTU6 479 aa12.13□□□□□ -0.47
CACNB3-224ENST00000552812 SENP6Q9GZR1 1112 aaPredicted RBP12.13□□□□□ -0.47
CACNB3-224ENST00000552812 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.13□□□□□ -0.47
CACNB3-224ENST00000552812 ADAMTS1Q9UHI8 967 aa12.13□□□□□ -0.47
CACNB3-224ENST00000552812 PIN4Q9Y237 131 aaKnown RBP12.13□□□□□ -0.47
CACNB3-224ENST00000552812 PAXBP1Q9Y5B6 917 aa12.13□□□□□ -0.47
CACNB3-224ENST00000552812 RALGAPA2Q2PPJ7 1873 aa12.13□□□□□ -0.47
CACNB3-224ENST00000552812 A0A087X0T9 212 aa12.12□□□□□ -0.47
CACNB3-224ENST00000552812 LACTBL1A8MY62 500 aa12.12□□□□□ -0.47
CACNB3-224ENST00000552812 CAND2O75155 1236 aa12.12□□□□□ -0.47
CACNB3-224ENST00000552812 NPTXRO95502 500 aa12.12□□□□□ -0.47
CACNB3-224ENST00000552812 FAM228BP0C875 321 aa12.12□□□□□ -0.47
CACNB3-224ENST00000552812 PNMA6AP0CW24 399 aaPredicted RBP12.12□□□□□ -0.47
CACNB3-224ENST00000552812 NOP14P78316 857 aaKnown RBP12.12□□□□□ -0.47
CACNB3-224ENST00000552812 TRPC3Q13507 836 aa12.12□□□□□ -0.47
CACNB3-224ENST00000552812 GPIHBP1Q8IV16 184 aa12.12□□□□□ -0.47
CACNB3-224ENST00000552812 TAF4BQ92750 862 aa12.12□□□□□ -0.47
CACNB3-224ENST00000552812 KAT5Q92993 513 aa12.12□□□□□ -0.47
CACNB3-224ENST00000552812 TATDN2Q93075 761 aa12.12□□□□□ -0.47
CACNB3-224ENST00000552812 FAM84AQ96KN4 292 aa12.12□□□□□ -0.47
CACNB3-224ENST00000552812 TSPAN18Q96SJ8 248 aa12.12□□□□□ -0.47
CACNB3-224ENST00000552812 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.12□□□□□ -0.47
CACNB3-224ENST00000552812 SEZ6LQ9BYH1 1024 aa12.12□□□□□ -0.47
CACNB3-224ENST00000552812 TRIM6Q9C030 488 aaPredicted RBP12.12□□□□□ -0.47
CACNB3-224ENST00000552812 WBP1LQ9NX94 342 aa12.12□□□□□ -0.47
CACNB3-224ENST00000552812 TSKSQ9UJT2 592 aa12.12□□□□□ -0.47
CACNB3-224ENST00000552812 PTPN22Q9Y2R2 807 aa12.12□□□□□ -0.47
CACNB3-224ENST00000552812 DERAQ9Y315 318 aa12.12□□□□□ -0.47
CACNB3-224ENST00000552812 CENPFP49454 3210 aa12.12□□□□□ -0.47
CACNB3-224ENST00000552812 PCNTO95613 3336 aa12.12□□□□□ -0.47
CACNB3-224ENST00000552812 CITO14578 2027 aa12.12□□□□□ -0.47
CACNB3-224ENST00000552812 A0A0U1RQJ8 604 aa12.11□□□□□ -0.47
CACNB3-224ENST00000552812 MEFVO15553 781 aaPredicted RBP12.11□□□□□ -0.47
CACNB3-224ENST00000552812 PJA2O43164 708 aa12.11□□□□□ -0.47
CACNB3-224ENST00000552812 NFICP08651 508 aa12.11□□□□□ -0.47
CACNB3-224ENST00000552812 MAGEA1P43355 309 aa12.11□□□□□ -0.47
CACNB3-224ENST00000552812 YARSP54577 528 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms