RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 LNX1Q8TBB1 728 aaPredicted RBP13.65□□□□□ -0.22
CACNB3-223ENST00000552480 TAF4BQ92750 862 aa13.65□□□□□ -0.22
CACNB3-223ENST00000552480 AGPAT1Q99943 283 aa13.65□□□□□ -0.22
CACNB3-223ENST00000552480 IRX2Q9BZI1 471 aaPredicted RBP13.65□□□□□ -0.22
CACNB3-223ENST00000552480 SENP6Q9GZR1 1112 aaPredicted RBP13.65□□□□□ -0.22
CACNB3-223ENST00000552480 PLEKHA5Q9HAU0 1116 aa13.65□□□□□ -0.22
CACNB3-223ENST00000552480 TRIM10Q9UDY6 481 aa13.65□□□□□ -0.22
CACNB3-223ENST00000552480 NAGPAQ9UK23 515 aa13.65□□□□□ -0.22
CACNB3-223ENST00000552480 TFR2Q9UP52 801 aa13.65□□□□□ -0.22
CACNB3-223ENST00000552480 PIN4Q9Y237 131 aaKnown RBP13.65□□□□□ -0.22
CACNB3-223ENST00000552480 DERAQ9Y315 318 aa13.65□□□□□ -0.22
CACNB3-223ENST00000552480 C2CD2Q9Y426 696 aa13.65□□□□□ -0.22
CACNB3-223ENST00000552480 TRIM17Q9Y577 477 aa13.65□□□□□ -0.22
CACNB3-223ENST00000552480 TRIP12Q14669 1992 aaPredicted RBP13.65□□□□□ -0.22
CACNB3-223ENST00000552480 BTNL10A8MVZ5 291 aa13.64□□□□□ -0.23
CACNB3-223ENST00000552480 FANCGO15287 622 aa13.64□□□□□ -0.23
CACNB3-223ENST00000552480 SGPL1O95470 568 aa13.64□□□□□ -0.23
CACNB3-223ENST00000552480 CST3P01034 146 aaPredicted RBP13.64□□□□□ -0.23
CACNB3-223ENST00000552480 TNFAIP3P21580 790 aa13.64□□□□□ -0.23
CACNB3-223ENST00000552480 TERF1P54274 439 aa13.64□□□□□ -0.23
CACNB3-223ENST00000552480 YARSP54577 528 aaKnown RBP13.64□□□□□ -0.23
CACNB3-223ENST00000552480 MYL6P60660 151 aa13.64□□□□□ -0.23
CACNB3-223ENST00000552480 MGAT3Q09327 533 aa13.64□□□□□ -0.23
CACNB3-223ENST00000552480 PTK7Q13308 1070 aa13.64□□□□□ -0.23
CACNB3-223ENST00000552480 ITGA7Q13683 1181 aa13.64□□□□□ -0.23
CACNB3-223ENST00000552480 TMEM132DQ14C87 1099 aa13.64□□□□□ -0.23
CACNB3-223ENST00000552480 PTGISQ16647 500 aa13.64□□□□□ -0.23
CACNB3-223ENST00000552480 FAM228AQ86W67 206 aa13.64□□□□□ -0.23
CACNB3-223ENST00000552480 SLC35F6Q8N357 371 aa13.64□□□□□ -0.23
CACNB3-223ENST00000552480 EPS8L1Q8TE68 723 aa13.64□□□□□ -0.23
CACNB3-223ENST00000552480 U2AF1L4Q8WU68 220 aaKnown RBP13.64□□□□□ -0.23
CACNB3-223ENST00000552480 SECISBP2LQ93073 1101 aaKnown RBP13.64□□□□□ -0.23
CACNB3-223ENST00000552480 WNT8BQ93098 351 aa13.64□□□□□ -0.23
CACNB3-223ENST00000552480 ELMO3Q96BJ8 720 aa13.64□□□□□ -0.23
CACNB3-223ENST00000552480 SNX27Q96L92 541 aa13.64□□□□□ -0.23
CACNB3-223ENST00000552480 BEGAINQ9BUH8 593 aa13.64□□□□□ -0.23
CACNB3-223ENST00000552480 EIF2AQ9BY44 585 aaKnown RBP13.64□□□□□ -0.23
CACNB3-223ENST00000552480 NOCTQ9UK39 431 aaKnown RBP13.64□□□□□ -0.23
CACNB3-223ENST00000552480 INTUQ9ULD6 942 aa13.64□□□□□ -0.23
CACNB3-223ENST00000552480 NOC2LQ9Y3T9 749 aaKnown RBP13.64□□□□□ -0.23
CACNB3-223ENST00000552480 NUB1Q9Y5A7 615 aa13.64□□□□□ -0.23
CACNB3-223ENST00000552480 UMODL1Q5DID0 1318 aa13.64□□□□□ -0.23
CACNB3-223ENST00000552480 CYP26A1O43174 497 aa13.63□□□□□ -0.23
CACNB3-223ENST00000552480 CLSTN1O94985 981 aa13.63□□□□□ -0.23
CACNB3-223ENST00000552480 KRT5P13647 590 aa13.63□□□□□ -0.23
CACNB3-223ENST00000552480 ACO1P21399 889 aaKnown RBP13.63□□□□□ -0.23
CACNB3-223ENST00000552480 PDE6CP51160 858 aa13.63□□□□□ -0.23
CACNB3-223ENST00000552480 ZNF699Q32M78 642 aa13.63□□□□□ -0.23
CACNB3-223ENST00000552480 UBXN11Q5T124 520 aa13.63□□□□□ -0.23
CACNB3-223ENST00000552480 NOP9Q86U38 636 aaKnown RBP13.63□□□□□ -0.23
CACNB3-223ENST00000552480 GLYCTKQ8IVS8 523 aa13.63□□□□□ -0.23
CACNB3-223ENST00000552480 RNF10Q8N5U6 811 aaKnown RBP13.63□□□□□ -0.23
CACNB3-223ENST00000552480 UBR7Q8N806 425 aa13.63□□□□□ -0.23
CACNB3-223ENST00000552480 C1orf127Q8N9H9 656 aa13.63□□□□□ -0.23
CACNB3-223ENST00000552480 ARRDC4Q8NCT1 418 aa13.63□□□□□ -0.23
CACNB3-223ENST00000552480 SLC20A1Q8WUM9 679 aa13.63□□□□□ -0.23
CACNB3-223ENST00000552480 FAXDC2Q96IV6 333 aa13.63□□□□□ -0.23
CACNB3-223ENST00000552480 GLT1D1Q96MS3 346 aa13.63□□□□□ -0.23
CACNB3-223ENST00000552480 ARID3AQ99856 593 aa13.63□□□□□ -0.23
CACNB3-223ENST00000552480 TRIM6Q9C030 488 aaPredicted RBP13.63□□□□□ -0.23
CACNB3-223ENST00000552480 NIF3L1Q9GZT8 377 aa13.63□□□□□ -0.23
CACNB3-223ENST00000552480 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.63□□□□□ -0.23
CACNB3-223ENST00000552480 SNTG2Q9NY99 539 aa13.63□□□□□ -0.23
CACNB3-223ENST00000552480 SIX4Q9UIU6 781 aa13.63□□□□□ -0.23
CACNB3-223ENST00000552480 ITGA11Q9UKX5 1188 aa13.63□□□□□ -0.23
CACNB3-223ENST00000552480 CNTN6Q9UQ52 1028 aa13.63□□□□□ -0.23
CACNB3-223ENST00000552480 A0A1W2PQ45 241 aaPredicted RBP13.62□□□□□ -0.23
CACNB3-223ENST00000552480 A0A1W2PQY0 241 aa13.62□□□□□ -0.23
CACNB3-223ENST00000552480 MACROD2A1Z1Q3 448 aa13.62□□□□□ -0.23
CACNB3-223ENST00000552480 RIOK3O14730 519 aaKnown RBP13.62□□□□□ -0.23
CACNB3-223ENST00000552480 CAND2O75155 1236 aa13.62□□□□□ -0.23
CACNB3-223ENST00000552480 TACC1O75410 805 aa13.62□□□□□ -0.23
CACNB3-223ENST00000552480 RPS6KA5O75582 802 aa13.62□□□□□ -0.23
CACNB3-223ENST00000552480 CHRNA1P02708 482 aa13.62□□□□□ -0.23
CACNB3-223ENST00000552480 CTSHP09668 335 aa13.62□□□□□ -0.23
CACNB3-223ENST00000552480 H2AFZP0C0S5 128 aa13.62□□□□□ -0.23
CACNB3-223ENST00000552480 CYP11B1P15538 503 aa13.62□□□□□ -0.23
CACNB3-223ENST00000552480 CHRNB2P17787 502 aa13.62□□□□□ -0.23
CACNB3-223ENST00000552480 ATICP31939 592 aa13.62□□□□□ -0.23
CACNB3-223ENST00000552480 BPIFB4P59827 614 aa13.62□□□□□ -0.23
CACNB3-223ENST00000552480 SCARA3Q6AZY7 606 aa13.62□□□□□ -0.23
CACNB3-223ENST00000552480 H2AFVQ71UI9 128 aa13.62□□□□□ -0.23
CACNB3-223ENST00000552480 SLC47A2Q86VL8 602 aa13.62□□□□□ -0.23
CACNB3-223ENST00000552480 RPUSD2Q8IZ73 545 aaKnown RBP13.62□□□□□ -0.23
CACNB3-223ENST00000552480 SLC43A3Q8NBI5 491 aa13.62□□□□□ -0.23
CACNB3-223ENST00000552480 CXorf38Q8TB03 319 aa13.62□□□□□ -0.23
CACNB3-223ENST00000552480 KIF12Q96FN5 646 aa13.62□□□□□ -0.23
CACNB3-223ENST00000552480 TSPAN18Q96SJ8 248 aa13.62□□□□□ -0.23
CACNB3-223ENST00000552480 NAPGQ99747 312 aaPredicted RBP13.62□□□□□ -0.23
CACNB3-223ENST00000552480 PACSIN1Q9BY11 444 aa13.62□□□□□ -0.23
CACNB3-223ENST00000552480 XYLT2Q9H1B5 865 aa13.62□□□□□ -0.23
CACNB3-223ENST00000552480 NXF3Q9H4D5 531 aaKnown RBP13.62□□□□□ -0.23
CACNB3-223ENST00000552480 CHST12Q9NRB3 414 aa13.62□□□□□ -0.23
CACNB3-223ENST00000552480 CNTN3Q9P232 1028 aa13.62□□□□□ -0.23
CACNB3-223ENST00000552480 TSKSQ9UJT2 592 aa13.62□□□□□ -0.23
CACNB3-223ENST00000552480 PHF24Q9UPV7 400 aa13.62□□□□□ -0.23
CACNB3-223ENST00000552480 PCDHB4Q9Y5E5 795 aa13.62□□□□□ -0.23
CACNB3-223ENST00000552480 DUSP10Q9Y6W6 482 aa13.62□□□□□ -0.23
CACNB3-223ENST00000552480 A0A0U1RQG5 324 aaPredicted RBP13.61□□□□□ -0.23
CACNB3-223ENST00000552480 CTAGE9A4FU28 777 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms