RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 SOX8P57073 446 aa4.84□□□□□ -1.63
LSM6P2-201ENST00000552208 TBX2Q13207 712 aaPredicted RBP4.84□□□□□ -1.63
LSM6P2-201ENST00000552208 SMAD4Q13485 552 aaKnown RBP4.84□□□□□ -1.63
LSM6P2-201ENST00000552208 SLC4A8Q2Y0W8 1093 aa4.84□□□□□ -1.63
LSM6P2-201ENST00000552208 WDR78Q5VTH9 848 aa4.84□□□□□ -1.63
LSM6P2-201ENST00000552208 GGT6Q6P531 493 aa4.84□□□□□ -1.63
LSM6P2-201ENST00000552208 STK32CQ86UX6 486 aa4.84□□□□□ -1.63
LSM6P2-201ENST00000552208 SUGP1Q8IWZ8 645 aaKnown RBP4.84□□□□□ -1.63
LSM6P2-201ENST00000552208 PPHLN1Q8NEY8 458 aaKnown RBP4.84□□□□□ -1.63
LSM6P2-201ENST00000552208 REPS2Q8NFH8 660 aa4.84□□□□□ -1.63
LSM6P2-201ENST00000552208 OR6B3Q8NGW1 331 aa4.84□□□□□ -1.63
LSM6P2-201ENST00000552208 GFM2Q969S9 779 aaKnown RBP4.84□□□□□ -1.63
LSM6P2-201ENST00000552208 ZNF566Q969W8 418 aa4.84□□□□□ -1.63
LSM6P2-201ENST00000552208 SNX22Q96L94 193 aa4.84□□□□□ -1.63
LSM6P2-201ENST00000552208 PPM1MQ96MI6 270 aa4.84□□□□□ -1.63
LSM6P2-201ENST00000552208 UIMC1Q96RL1 719 aa4.84□□□□□ -1.63
LSM6P2-201ENST00000552208 WRNIP1Q96S55 665 aa4.84□□□□□ -1.63
LSM6P2-201ENST00000552208 CDC5LQ99459 802 aaKnown RBP4.84□□□□□ -1.63
LSM6P2-201ENST00000552208 EIF2AK1Q9BQI3 630 aaKnown RBP4.84□□□□□ -1.63
LSM6P2-201ENST00000552208 C11orf84Q9BUA3 381 aaPredicted RBP4.84□□□□□ -1.63
LSM6P2-201ENST00000552208 SERHLQ9NQF3 203 aa4.84□□□□□ -1.63
LSM6P2-201ENST00000552208 ITM2CQ9NQX7 267 aa4.84□□□□□ -1.63
LSM6P2-201ENST00000552208 SACM1LQ9NTJ5 587 aa4.84□□□□□ -1.63
LSM6P2-201ENST00000552208 RRN3Q9NYV6 651 aa4.84□□□□□ -1.63
LSM6P2-201ENST00000552208 ZDHHC8Q9ULC8 765 aa4.84□□□□□ -1.63
LSM6P2-201ENST00000552208 SCINQ9Y6U3 715 aa4.84□□□□□ -1.63
LSM6P2-201ENST00000552208 LGALS16A8MUM7 142 aa4.83□□□□□ -1.64
LSM6P2-201ENST00000552208 SYT5O00445 386 aa4.83□□□□□ -1.64
LSM6P2-201ENST00000552208 BTN3A1O00481 513 aa4.83□□□□□ -1.64
LSM6P2-201ENST00000552208 ACKR2O00590 384 aa4.83□□□□□ -1.64
LSM6P2-201ENST00000552208 DAPK3O43293 454 aa4.83□□□□□ -1.64
LSM6P2-201ENST00000552208 PYGLP06737 847 aa4.83□□□□□ -1.64
LSM6P2-201ENST00000552208 IL1R1P14778 569 aa4.83□□□□□ -1.64
LSM6P2-201ENST00000552208 ALOX15P16050 662 aaPredicted RBP4.83□□□□□ -1.64
LSM6P2-201ENST00000552208 SSTR4P31391 388 aa4.83□□□□□ -1.64
LSM6P2-201ENST00000552208 ETV4P43268 484 aa4.83□□□□□ -1.64
LSM6P2-201ENST00000552208 KIR2DL3P43628 341 aa4.83□□□□□ -1.64
LSM6P2-201ENST00000552208 PIK3CGP48736 1102 aa4.83□□□□□ -1.64
LSM6P2-201ENST00000552208 ITGA8P53708 1063 aa4.83□□□□□ -1.64
LSM6P2-201ENST00000552208 MLLT6P55198 1093 aaPredicted RBP4.83□□□□□ -1.64
LSM6P2-201ENST00000552208 SESN2P58004 480 aaPredicted RBP4.83□□□□□ -1.64
LSM6P2-201ENST00000552208 EXOSC9Q06265 439 aaKnown RBP4.83□□□□□ -1.64
LSM6P2-201ENST00000552208 PTK2BQ14289 1009 aa4.83□□□□□ -1.64
LSM6P2-201ENST00000552208 POSTNQ15063 836 aa4.83□□□□□ -1.64
LSM6P2-201ENST00000552208 TARBP2Q15633 366 aaKnown RBP4.83□□□□□ -1.64
LSM6P2-201ENST00000552208 ZNF827Q17R98 1081 aa4.83□□□□□ -1.64
LSM6P2-201ENST00000552208 PRR31Q5SQ13 230 aa4.83□□□□□ -1.64
LSM6P2-201ENST00000552208 FKBP15Q5T1M5 1219 aa4.83□□□□□ -1.64
LSM6P2-201ENST00000552208 INTS11Q5TA45 600 aaKnown RBP4.83□□□□□ -1.64
LSM6P2-201ENST00000552208 OLFML2BQ68BL8 750 aa4.83□□□□□ -1.64
LSM6P2-201ENST00000552208 JMJD6Q6NYC1 403 aaPredicted RBP4.83□□□□□ -1.64
LSM6P2-201ENST00000552208 CNKSR3Q6P9H4 555 aa4.83□□□□□ -1.64
LSM6P2-201ENST00000552208 LARP4Q71RC2 724 aaKnown RBP eCLIP4.83□□□□□ -1.64
LSM6P2-201ENST00000552208 BEND5Q7L4P6 421 aa4.83□□□□□ -1.64
LSM6P2-201ENST00000552208 ZNF572Q7Z3I7 529 aaPredicted RBP4.83□□□□□ -1.64
LSM6P2-201ENST00000552208 LDHDQ86WU2 507 aa4.83□□□□□ -1.64
LSM6P2-201ENST00000552208 PLXDC1Q8IUK5 500 aa4.83□□□□□ -1.64
LSM6P2-201ENST00000552208 TP53INP2Q8IXH6 220 aa4.83□□□□□ -1.64
LSM6P2-201ENST00000552208 FANCBQ8NB91 859 aa4.83□□□□□ -1.64
LSM6P2-201ENST00000552208 KYQ8NBH2 561 aa4.83□□□□□ -1.64
LSM6P2-201ENST00000552208 IL17RDQ8NFM7 739 aa4.83□□□□□ -1.64
LSM6P2-201ENST00000552208 STON2Q8WXE9 905 aa4.83□□□□□ -1.64
LSM6P2-201ENST00000552208 SKA1Q96BD8 255 aa4.83□□□□□ -1.64
LSM6P2-201ENST00000552208 IQCDQ96DY2 449 aa4.83□□□□□ -1.64
LSM6P2-201ENST00000552208 ZSWIM3Q96MP5 696 aa4.83□□□□□ -1.64
LSM6P2-201ENST00000552208 UHRF1Q96T88 793 aaPredicted RBP4.83□□□□□ -1.64
LSM6P2-201ENST00000552208 HEPHQ9BQS7 1158 aa4.83□□□□□ -1.64
LSM6P2-201ENST00000552208 ZNF518BQ9C0D4 1074 aa4.83□□□□□ -1.64
LSM6P2-201ENST00000552208 ZHX3Q9H4I2 956 aa4.83□□□□□ -1.64
LSM6P2-201ENST00000552208 OBP2BQ9NPH6 170 aa4.83□□□□□ -1.64
LSM6P2-201ENST00000552208 TM7SF3Q9NS93 570 aa4.83□□□□□ -1.64
LSM6P2-201ENST00000552208 TMEM140Q9NV12 185 aa4.83□□□□□ -1.64
LSM6P2-201ENST00000552208 ING3Q9NXR8 418 aa4.83□□□□□ -1.64
LSM6P2-201ENST00000552208 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.83□□□□□ -1.64
LSM6P2-201ENST00000552208 SLC39A10Q9ULF5 831 aa4.83□□□□□ -1.64
LSM6P2-201ENST00000552208 MAN2B2Q9Y2E5 1009 aa4.83□□□□□ -1.64
LSM6P2-201ENST00000552208 CTDP1Q9Y5B0 961 aaPredicted RBP4.83□□□□□ -1.64
LSM6P2-201ENST00000552208 ACTL7AQ9Y615 435 aa4.83□□□□□ -1.64
LSM6P2-201ENST00000552208 RPS6KL1Q9Y6S9 549 aa4.83□□□□□ -1.64
LSM6P2-201ENST00000552208 EYA2O00167 538 aa4.82□□□□□ -1.64
LSM6P2-201ENST00000552208 MTSS1O43312 755 aa4.82□□□□□ -1.64
LSM6P2-201ENST00000552208 RHOBTB3O94955 611 aa4.82□□□□□ -1.64
LSM6P2-201ENST00000552208 WNT11O96014 354 aa4.82□□□□□ -1.64
LSM6P2-201ENST00000552208 CD1AP06126 327 aa4.82□□□□□ -1.64
LSM6P2-201ENST00000552208 SBK3P0C264 359 aa4.82□□□□□ -1.64
LSM6P2-201ENST00000552208 IL2RBP14784 551 aa4.82□□□□□ -1.64
LSM6P2-201ENST00000552208 FOXO4P98177 505 aa4.82□□□□□ -1.64
LSM6P2-201ENST00000552208 SLC13A2Q13183 592 aa4.82□□□□□ -1.64
LSM6P2-201ENST00000552208 DDX10Q13206 875 aaKnown RBP4.82□□□□□ -1.64
LSM6P2-201ENST00000552208 SP140Q13342 867 aa4.82□□□□□ -1.64
LSM6P2-201ENST00000552208 SPARCL1Q14515 664 aa4.82□□□□□ -1.64
LSM6P2-201ENST00000552208 KIF22Q14807 665 aa4.82□□□□□ -1.64
LSM6P2-201ENST00000552208 PRAMEF14Q5SWL7 426 aa4.82□□□□□ -1.64
LSM6P2-201ENST00000552208 HYIQ5T013 277 aa4.82□□□□□ -1.64
LSM6P2-201ENST00000552208 OTUD7BQ6GQQ9 843 aa4.82□□□□□ -1.64
LSM6P2-201ENST00000552208 TANGO2Q6ICL3 276 aa4.82□□□□□ -1.64
LSM6P2-201ENST00000552208 ZNF783Q6ZMS7 281 aa4.82□□□□□ -1.64
LSM6P2-201ENST00000552208 RFX8Q6ZV50 586 aa4.82□□□□□ -1.64
LSM6P2-201ENST00000552208 TXLNBQ8N3L3 684 aa4.82□□□□□ -1.64
LSM6P2-201ENST00000552208 TTLL6Q8N841 843 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms