RNA–Protein interactions for RNA: ENST00000551418.5

PRPF40B-215, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-215ENST00000551418 HARSP12081 509 aaKnown RBP19.62■□□□□ 0.73
PRPF40B-215ENST00000551418 CEBPBP17676 345 aa19.62■□□□□ 0.73
PRPF40B-215ENST00000551418 PROZP22891 400 aa19.62■□□□□ 0.73
PRPF40B-215ENST00000551418 U2AF2P26368 475 aaKnown RBP eCLIP19.62■□□□□ 0.73
PRPF40B-215ENST00000551418 TRAPPC10P48553 1259 aa19.62■□□□□ 0.73
PRPF40B-215ENST00000551418 UBXN2BQ14CS0 331 aa19.62■□□□□ 0.73
PRPF40B-215ENST00000551418 TANGO2Q6ICL3 276 aa19.62■□□□□ 0.73
PRPF40B-215ENST00000551418 TCEAL4Q96EI5 215 aa19.62■□□□□ 0.73
PRPF40B-215ENST00000551418 TMEM134Q9H6X4 195 aa19.62■□□□□ 0.73
PRPF40B-215ENST00000551418 KCNH3Q9ULD8 1083 aa19.62■□□□□ 0.73
PRPF40B-215ENST00000551418 NOL7Q9UMY1 257 aaKnown RBP19.62■□□□□ 0.73
PRPF40B-215ENST00000551418 PATJQ8NI35 1801 aa19.62■□□□□ 0.73
PRPF40B-215ENST00000551418 GPR179Q6PRD1 2367 aa19.62■□□□□ 0.73
PRPF40B-215ENST00000551418 FRYLO94915 3013 aa19.61■□□□□ 0.73
PRPF40B-215ENST00000551418 DMXL1Q9Y485 3027 aa19.61■□□□□ 0.73
PRPF40B-215ENST00000551418 PHLPP2Q6ZVD8 1323 aa19.61■□□□□ 0.73
PRPF40B-215ENST00000551418 FAM170BA6NMN3 283 aa19.61■□□□□ 0.73
PRPF40B-215ENST00000551418 YARSP54577 528 aaKnown RBP19.61■□□□□ 0.73
PRPF40B-215ENST00000551418 RAD51AP2Q09MP3 1159 aa19.61■□□□□ 0.73
PRPF40B-215ENST00000551418 SLC8B1Q6J4K2 584 aa19.61■□□□□ 0.73
PRPF40B-215ENST00000551418 KIAA2013Q8IYS2 634 aa19.61■□□□□ 0.73
PRPF40B-215ENST00000551418 FAM184AQ8NB25 1140 aa19.61■□□□□ 0.73
PRPF40B-215ENST00000551418 ZNF461Q8TAF7 563 aa19.61■□□□□ 0.73
PRPF40B-215ENST00000551418 SHDQ96IW2 340 aa19.61■□□□□ 0.73
PRPF40B-215ENST00000551418 MRPL4Q9BYD3 311 aaKnown RBP19.61■□□□□ 0.73
PRPF40B-215ENST00000551418 KMT5AQ9NQR1 393 aa19.61■□□□□ 0.73
PRPF40B-215ENST00000551418 DNM3Q9UQ16 869 aa19.61■□□□□ 0.73
PRPF40B-215ENST00000551418 PDCD11Q14690 1871 aaKnown RBP19.6■□□□□ 0.73
PRPF40B-215ENST00000551418 ARHGEF37A1IGU5 675 aa19.6■□□□□ 0.73
PRPF40B-215ENST00000551418 TRAPPC3O43617 180 aa19.6■□□□□ 0.73
PRPF40B-215ENST00000551418 KCNE1P15382 129 aa19.6■□□□□ 0.73
PRPF40B-215ENST00000551418 CCR2P41597 374 aa19.6■□□□□ 0.73
PRPF40B-215ENST00000551418 HMGN5P82970 282 aaKnown RBP19.6■□□□□ 0.73
PRPF40B-215ENST00000551418 MRPL58Q14197 206 aaKnown RBP19.6■□□□□ 0.73
PRPF40B-215ENST00000551418 HS6ST3Q8IZP7 471 aa19.6■□□□□ 0.73
PRPF40B-215ENST00000551418 RMDN1Q96DB5 314 aa19.6■□□□□ 0.73
PRPF40B-215ENST00000551418 ACAP3Q96P50 834 aa19.6■□□□□ 0.73
PRPF40B-215ENST00000551418 PLIN2Q99541 437 aa19.6■□□□□ 0.73
PRPF40B-215ENST00000551418 CORO1BQ9BR76 489 aa19.6■□□□□ 0.73
PRPF40B-215ENST00000551418 TCHPQ9BT92 498 aa19.6■□□□□ 0.73
PRPF40B-215ENST00000551418 SEMA4AQ9H3S1 761 aa19.6■□□□□ 0.73
PRPF40B-215ENST00000551418 LTB4R2Q9NPC1 389 aa19.6■□□□□ 0.73
PRPF40B-215ENST00000551418 SPATA6Q9NWH7 488 aaPredicted RBP19.6■□□□□ 0.73
PRPF40B-215ENST00000551418 FBXL5Q9UKA1 691 aa19.6■□□□□ 0.73
PRPF40B-215ENST00000551418 MYH11P35749 1972 aa19.6■□□□□ 0.73
PRPF40B-215ENST00000551418 PRRG1O14668 218 aa19.59■□□□□ 0.73
PRPF40B-215ENST00000551418 MCF2P10911 925 aa19.59■□□□□ 0.73
PRPF40B-215ENST00000551418 PTPN2P17706 415 aa19.59■□□□□ 0.73
PRPF40B-215ENST00000551418 FCARP24071 287 aa19.59■□□□□ 0.73
PRPF40B-215ENST00000551418 TARSP26639 723 aaKnown RBP19.59■□□□□ 0.73
PRPF40B-215ENST00000551418 PRKCQQ04759 706 aa19.59■□□□□ 0.73
PRPF40B-215ENST00000551418 SPAG1Q07617 926 aa19.59■□□□□ 0.73
PRPF40B-215ENST00000551418 DMP1Q13316 513 aaPredicted RBP19.59■□□□□ 0.73
PRPF40B-215ENST00000551418 FZD5Q13467 585 aa19.59■□□□□ 0.73
PRPF40B-215ENST00000551418 ZRSR1Q15695 479 aaKnown RBP19.59■□□□□ 0.73
PRPF40B-215ENST00000551418 SLC10A6Q3KNW5 377 aa19.59■□□□□ 0.73
PRPF40B-215ENST00000551418 PRSS36Q5K4E3 855 aa19.59■□□□□ 0.73
PRPF40B-215ENST00000551418 SUMF1Q8NBK3 374 aa19.59■□□□□ 0.73
PRPF40B-215ENST00000551418 ZSCAN31Q96LW9 406 aaPredicted RBP19.59■□□□□ 0.73
PRPF40B-215ENST00000551418 PNMA5Q96PV4 448 aa19.59■□□□□ 0.73
PRPF40B-215ENST00000551418 HAPLN2Q9GZV7 340 aa19.59■□□□□ 0.73
PRPF40B-215ENST00000551418 CYP4F11Q9HBI6 524 aa19.59■□□□□ 0.73
PRPF40B-215ENST00000551418 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.59■□□□□ 0.73
PRPF40B-215ENST00000551418 TOPORSQ9NS56 1045 aaPredicted RBP19.59■□□□□ 0.73
PRPF40B-215ENST00000551418 CNTN3Q9P232 1028 aa19.59■□□□□ 0.73
PRPF40B-215ENST00000551418 NPHP3-ACAD11A0A0J9YXS1 232 aa19.58■□□□□ 0.72
PRPF40B-215ENST00000551418 ECI2O75521 394 aa19.58■□□□□ 0.72
PRPF40B-215ENST00000551418 ATF2P15336 505 aa19.58■□□□□ 0.72
PRPF40B-215ENST00000551418 GRM2Q14416 872 aa19.58■□□□□ 0.72
PRPF40B-215ENST00000551418 KRT79Q5XKE5 535 aa19.58■□□□□ 0.72
PRPF40B-215ENST00000551418 MPZL3Q6UWV2 235 aa19.58■□□□□ 0.72
PRPF40B-215ENST00000551418 TPRG1Q6ZUI0 275 aa19.58■□□□□ 0.72
PRPF40B-215ENST00000551418 APBB1IPQ7Z5R6 666 aaPredicted RBP19.58■□□□□ 0.72
PRPF40B-215ENST00000551418 ZSWIM3Q96MP5 696 aa19.58■□□□□ 0.72
PRPF40B-215ENST00000551418 HEBP1Q9NRV9 189 aa19.58■□□□□ 0.72
PRPF40B-215ENST00000551418 SLC38A7Q9NVC3 462 aa19.58■□□□□ 0.72
PRPF40B-215ENST00000551418 TUBGCP4Q9UGJ1 667 aa19.58■□□□□ 0.72
PRPF40B-215ENST00000551418 MOSPD3O75425 235 aa19.57■□□□□ 0.72
PRPF40B-215ENST00000551418 LRG1P02750 347 aa19.57■□□□□ 0.72
PRPF40B-215ENST00000551418 GJA1P17302 382 aa19.57■□□□□ 0.72
PRPF40B-215ENST00000551418 ELF1P32519 619 aa19.57■□□□□ 0.72
PRPF40B-215ENST00000551418 FOXK2Q01167 660 aa19.57■□□□□ 0.72
PRPF40B-215ENST00000551418 CACNB1Q02641 598 aaPredicted RBP19.57■□□□□ 0.72
PRPF40B-215ENST00000551418 CSTF1Q05048 431 aaKnown RBP19.57■□□□□ 0.72
PRPF40B-215ENST00000551418 CTXN3Q4LDR2 81 aa19.57■□□□□ 0.72
PRPF40B-215ENST00000551418 FAM78AQ5JUQ0 283 aa19.57■□□□□ 0.72
PRPF40B-215ENST00000551418 TSSK4Q6SA08 328 aa19.57■□□□□ 0.72
PRPF40B-215ENST00000551418 RTL10Q7L3V2 364 aa19.57■□□□□ 0.72
PRPF40B-215ENST00000551418 TCEAL8Q8IYN2 117 aa19.57■□□□□ 0.72
PRPF40B-215ENST00000551418 TMEM161BQ8NDZ6 487 aa19.57■□□□□ 0.72
PRPF40B-215ENST00000551418 SUSD3Q96L08 255 aa19.57■□□□□ 0.72
PRPF40B-215ENST00000551418 DRC1Q96MC2 740 aa19.57■□□□□ 0.72
PRPF40B-215ENST00000551418 TBC1D32Q96NH3 1257 aa19.57■□□□□ 0.72
PRPF40B-215ENST00000551418 NTPCRQ9BSD7 190 aaKnown RBP19.57■□□□□ 0.72
PRPF40B-215ENST00000551418 BCO2Q9BYV7 579 aa19.57■□□□□ 0.72
PRPF40B-215ENST00000551418 AVENQ9NQS1 362 aaPredicted RBP19.57■□□□□ 0.72
PRPF40B-215ENST00000551418 GDE1Q9NZC3 331 aa19.57■□□□□ 0.72
PRPF40B-215ENST00000551418 CEP72Q9P209 647 aa19.57■□□□□ 0.72
PRPF40B-215ENST00000551418 RBM19Q9Y4C8 960 aaKnown RBP19.57■□□□□ 0.72
PRPF40B-215ENST00000551418 NUB1Q9Y5A7 615 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms