RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 SLC10A6Q3KNW5 377 aa21.16■□□□□ 0.98
SSH1-209ENST00000551165 SRGAP1Q7Z6B7 1085 aa21.16■□□□□ 0.98
SSH1-209ENST00000551165 COG1Q8WTW3 980 aa21.16■□□□□ 0.98
SSH1-209ENST00000551165 PCDHGC5Q9Y5F6 944 aa21.16■□□□□ 0.98
SSH1-209ENST00000551165 BTNL10A8MVZ5 291 aa21.16■□□□□ 0.98
SSH1-209ENST00000551165 B4GALT4O60513 344 aa21.16■□□□□ 0.98
SSH1-209ENST00000551165 DNA2P51530 1060 aa21.16■□□□□ 0.98
SSH1-209ENST00000551165 SP3Q02447 781 aa21.16■□□□□ 0.98
SSH1-209ENST00000551165 ANKRD7Q92527 254 aa21.16■□□□□ 0.98
SSH1-209ENST00000551165 SNX12Q9UMY4 172 aa21.16■□□□□ 0.98
SSH1-209ENST00000551165 PDE2AO00408 941 aaPredicted RBP21.15■□□□□ 0.98
SSH1-209ENST00000551165 ASS1P00966 412 aaKnown RBP21.15■□□□□ 0.98
SSH1-209ENST00000551165 FTLP02792 175 aaPredicted RBP21.15■□□□□ 0.98
SSH1-209ENST00000551165 SSTR3P32745 418 aaPredicted RBP21.15■□□□□ 0.98
SSH1-209ENST00000551165 GJA9P57773 515 aa21.15■□□□□ 0.98
SSH1-209ENST00000551165 JADE1Q6IE81 842 aa21.15■□□□□ 0.98
SSH1-209ENST00000551165 ENOSF1Q7L5Y1 443 aa21.15■□□□□ 0.98
SSH1-209ENST00000551165 MMS19Q96T76 1030 aa21.15■□□□□ 0.98
SSH1-209ENST00000551165 EFCAB8A8MWE9 144 aa21.15■□□□□ 0.98
SSH1-209ENST00000551165 CFHP08603 1231 aa21.15■□□□□ 0.98
SSH1-209ENST00000551165 TMEM191BP0C7N4 346 aa21.15■□□□□ 0.98
SSH1-209ENST00000551165 HTRA3P83110 453 aa21.15■□□□□ 0.98
SSH1-209ENST00000551165 RSRC2Q7L4I2 434 aaKnown RBP21.15■□□□□ 0.98
SSH1-209ENST00000551165 C7orf31Q8N865 590 aa21.15■□□□□ 0.98
SSH1-209ENST00000551165 GCOM2Q9BZD3 368 aaPredicted RBP21.15■□□□□ 0.98
SSH1-209ENST00000551165 SIX4Q9UIU6 781 aa21.15■□□□□ 0.98
SSH1-209ENST00000551165 C17orf102A2RUQ5 167 aa21.14■□□□□ 0.97
SSH1-209ENST00000551165 MYCNP04198 464 aaPredicted RBP21.14■□□□□ 0.97
SSH1-209ENST00000551165 PDE6CP51160 858 aa21.14■□□□□ 0.97
SSH1-209ENST00000551165 GUCY2FP51841 1108 aa21.14■□□□□ 0.97
SSH1-209ENST00000551165 CDR2Q01850 454 aa21.14■□□□□ 0.97
SSH1-209ENST00000551165 WHAMMP3Q1A5X7 153 aa21.14■□□□□ 0.97
SSH1-209ENST00000551165 TEX35Q5T0J7 233 aa21.14■□□□□ 0.97
SSH1-209ENST00000551165 EIF2AQ9BY44 585 aaKnown RBP21.14■□□□□ 0.97
SSH1-209ENST00000551165 XYLT2Q9H1B5 865 aa21.14■□□□□ 0.97
SSH1-209ENST00000551165 ISCUQ9H1K1 167 aa21.14■□□□□ 0.97
SSH1-209ENST00000551165 SMARCAL1Q9NZC9 954 aa21.14■□□□□ 0.97
SSH1-209ENST00000551165 EHD2Q9NZN4 543 aa21.14■□□□□ 0.97
SSH1-209ENST00000551165 INTUQ9ULD6 942 aa21.14■□□□□ 0.97
SSH1-209ENST00000551165 HES2Q9Y543 173 aa21.14■□□□□ 0.97
SSH1-209ENST00000551165 DARSP14868 501 aaKnown RBP21.14■□□□□ 0.97
SSH1-209ENST00000551165 AP3M2P53677 418 aa21.14■□□□□ 0.97
SSH1-209ENST00000551165 TMEM270Q6UE05 265 aa21.14■□□□□ 0.97
SSH1-209ENST00000551165 CATSPER4Q7RTX7 472 aa21.14■□□□□ 0.97
SSH1-209ENST00000551165 LRRC57Q8N9N7 239 aa21.14■□□□□ 0.97
SSH1-209ENST00000551165 TPCN2Q8NHX9 752 aa21.14■□□□□ 0.97
SSH1-209ENST00000551165 SLC35G2Q8TBE7 412 aa21.14■□□□□ 0.97
SSH1-209ENST00000551165 UBXN4Q92575 508 aa21.14■□□□□ 0.97
SSH1-209ENST00000551165 RNF19AQ9NV58 838 aa21.14■□□□□ 0.97
SSH1-209ENST00000551165 COG5Q9UP83 839 aa21.14■□□□□ 0.97
SSH1-209ENST00000551165 PCDHB4Q9Y5E5 795 aa21.14■□□□□ 0.97
SSH1-209ENST00000551165 NPTXRO95502 500 aa21.13■□□□□ 0.97
SSH1-209ENST00000551165 TMEM253P0C7T8 217 aa21.13■□□□□ 0.97
SSH1-209ENST00000551165 HOXC8P31273 242 aa21.13■□□□□ 0.97
SSH1-209ENST00000551165 SURF1Q15526 300 aa21.13■□□□□ 0.97
SSH1-209ENST00000551165 C1orf127Q8N9H9 656 aa21.13■□□□□ 0.97
SSH1-209ENST00000551165 OSBPL9Q96SU4 736 aa21.13■□□□□ 0.97
SSH1-209ENST00000551165 SEPT4O43236 478 aa21.12■□□□□ 0.97
SSH1-209ENST00000551165 ATMINO43313 823 aaPredicted RBP21.12■□□□□ 0.97
SSH1-209ENST00000551165 KRT19P08727 400 aa21.12■□□□□ 0.97
SSH1-209ENST00000551165 TUBB2AQ13885 445 aa21.12■□□□□ 0.97
SSH1-209ENST00000551165 NBPF20Q3BBV1 942 aa21.12■□□□□ 0.97
SSH1-209ENST00000551165 SCARA5Q6ZMJ2 495 aa21.12■□□□□ 0.97
SSH1-209ENST00000551165 CD99L2Q8TCZ2 262 aa21.12■□□□□ 0.97
SSH1-209ENST00000551165 TUBB2BQ9BVA1 445 aa21.12■□□□□ 0.97
SSH1-209ENST00000551165 KATNAL1Q9BW62 490 aa21.12■□□□□ 0.97
SSH1-209ENST00000551165 IL18RAPO95256 599 aa21.12■□□□□ 0.97
SSH1-209ENST00000551165 PRKAR2AP13861 404 aaKnown RBP21.12■□□□□ 0.97
SSH1-209ENST00000551165 ZSCAN20P17040 1043 aaPredicted RBP21.12■□□□□ 0.97
SSH1-209ENST00000551165 CD58P19256 250 aa21.12■□□□□ 0.97
SSH1-209ENST00000551165 EIF4BP23588 611 aaKnown RBP21.12■□□□□ 0.97
SSH1-209ENST00000551165 TRPC3Q13507 836 aa21.12■□□□□ 0.97
SSH1-209ENST00000551165 CREG2Q8IUH2 290 aa21.12■□□□□ 0.97
SSH1-209ENST00000551165 CEP112Q8N8E3 955 aa21.12■□□□□ 0.97
SSH1-209ENST00000551165 NOA1Q8NC60 698 aaKnown RBP21.12■□□□□ 0.97
SSH1-209ENST00000551165 CXorf38Q8TB03 319 aa21.12■□□□□ 0.97
SSH1-209ENST00000551165 CTNNBL1Q8WYA6 563 aaPredicted RBP21.12■□□□□ 0.97
SSH1-209ENST00000551165 WNT8BQ93098 351 aa21.12■□□□□ 0.97
SSH1-209ENST00000551165 ANKRD36BP1Q96IX9 119 aa21.12■□□□□ 0.97
SSH1-209ENST00000551165 CREBZFQ9NS37 354 aa21.12■□□□□ 0.97
SSH1-209ENST00000551165 POLIQ9UNA4 740 aa21.12■□□□□ 0.97
SSH1-209ENST00000551165 HYOU1Q9Y4L1 999 aa21.12■□□□□ 0.97
SSH1-209ENST00000551165 ANKRD62A6NC57 917 aa21.11■□□□□ 0.97
SSH1-209ENST00000551165 TNNC2P02585 160 aa21.11■□□□□ 0.97
SSH1-209ENST00000551165 WEE2P0C1S8 567 aa21.11■□□□□ 0.97
SSH1-209ENST00000551165 SNX17Q15036 470 aa21.11■□□□□ 0.97
SSH1-209ENST00000551165 MEI1Q5TIA1 1274 aa21.11■□□□□ 0.97
SSH1-209ENST00000551165 NCANO14594 1321 aa21.11■□□□□ 0.97
SSH1-209ENST00000551165 ATP8B3O60423 1300 aa21.11■□□□□ 0.97
SSH1-209ENST00000551165 A0A0A6YYK5 440 aaPredicted RBP21.11■□□□□ 0.97
SSH1-209ENST00000551165 ADAMTS4O75173 837 aa21.11■□□□□ 0.97
SSH1-209ENST00000551165 RARBP10826 455 aa21.11■□□□□ 0.97
SSH1-209ENST00000551165 SGSM1Q2NKQ1 1148 aa21.11■□□□□ 0.97
SSH1-209ENST00000551165 UBR7Q8N806 425 aa21.11■□□□□ 0.97
SSH1-209ENST00000551165 RBBP8NLQ8NC74 664 aaPredicted RBP21.11■□□□□ 0.97
SSH1-209ENST00000551165 IMPG2Q9BZV3 1241 aa21.11■□□□□ 0.97
SSH1-209ENST00000551165 UPF3AQ9H1J1 476 aaKnown RBP21.11■□□□□ 0.97
SSH1-209ENST00000551165 SNTG2Q9NY99 539 aa21.11■□□□□ 0.97
SSH1-209ENST00000551165 RTN2O75298 545 aa21.1■□□□□ 0.97
SSH1-209ENST00000551165 ITGB3P05106 788 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms