RNA–Protein interactions for RNA: ENST00000550863.1

CPNE8-207, Transcript of copine 8, humanhuman

TSL 4

Gene CPNE8, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-207ENST00000550863 SPTBN4Q9H254 2564 aa12.55□□□□□ -0.4
CPNE8-207ENST00000550863 NUP210Q8TEM1 1887 aaPredicted RBP12.55□□□□□ -0.4
CPNE8-207ENST00000550863 K7ENM7 598 aa12.54□□□□□ -0.4
CPNE8-207ENST00000550863 LRRN2O75325 713 aa12.54□□□□□ -0.4
CPNE8-207ENST00000550863 NCKAP1LP55160 1127 aa12.54□□□□□ -0.4
CPNE8-207ENST00000550863 CREMQ03060 361 aa12.54□□□□□ -0.4
CPNE8-207ENST00000550863 SF3A1Q15459 793 aaKnown RBP12.54□□□□□ -0.4
CPNE8-207ENST00000550863 LARP1BQ659C4 914 aaKnown RBP12.54□□□□□ -0.4
CPNE8-207ENST00000550863 SLC39A4Q6P5W5 647 aa12.54□□□□□ -0.4
CPNE8-207ENST00000550863 HDAC7Q8WUI4 952 aa12.54□□□□□ -0.4
CPNE8-207ENST00000550863 STAMQ92783 540 aa12.54□□□□□ -0.4
CPNE8-207ENST00000550863 CDK5RAP3Q96JB5 506 aa12.54□□□□□ -0.4
CPNE8-207ENST00000550863 DNMT3BQ9UBC3 853 aaKnown RBP12.54□□□□□ -0.4
CPNE8-207ENST00000550863 KIF3AQ9Y496 699 aa12.54□□□□□ -0.4
CPNE8-207ENST00000550863 ANHXE9PGG2 379 aa12.53□□□□□ -0.4
CPNE8-207ENST00000550863 FAM189A1O60320 539 aa12.53□□□□□ -0.4
CPNE8-207ENST00000550863 SEC24AO95486 1093 aa12.53□□□□□ -0.4
CPNE8-207ENST00000550863 OR4Q2P0C623 313 aa12.53□□□□□ -0.4
CPNE8-207ENST00000550863 CEBPBP17676 345 aa12.53□□□□□ -0.4
CPNE8-207ENST00000550863 AOC1P19801 751 aa12.53□□□□□ -0.4
CPNE8-207ENST00000550863 NMT1P30419 496 aaKnown RBP12.53□□□□□ -0.4
CPNE8-207ENST00000550863 MATR3P43243 847 aaKnown RBP eCLIP12.53□□□□□ -0.4
CPNE8-207ENST00000550863 ELAVL2Q12926 359 aaKnown RBP12.53□□□□□ -0.4
CPNE8-207ENST00000550863 STRN3Q13033 797 aa12.53□□□□□ -0.4
CPNE8-207ENST00000550863 RAB33AQ14088 237 aa12.53□□□□□ -0.4
CPNE8-207ENST00000550863 DCLRE1AQ6PJP8 1040 aa12.53□□□□□ -0.4
CPNE8-207ENST00000550863 ASCL5Q7RTU5 278 aa12.53□□□□□ -0.4
CPNE8-207ENST00000550863 HAUS6Q7Z4H7 955 aa12.53□□□□□ -0.4
CPNE8-207ENST00000550863 NPAS3Q8IXF0 933 aa12.53□□□□□ -0.4
CPNE8-207ENST00000550863 GPR65Q8IYL9 337 aa12.53□□□□□ -0.4
CPNE8-207ENST00000550863 SPIRE2Q8WWL2 714 aa12.53□□□□□ -0.4
CPNE8-207ENST00000550863 FGF13Q92913 245 aa12.53□□□□□ -0.4
CPNE8-207ENST00000550863 BICD1Q96G01 975 aa12.53□□□□□ -0.4
CPNE8-207ENST00000550863 FAM84AQ96KN4 292 aa12.53□□□□□ -0.4
CPNE8-207ENST00000550863 UROC1Q96N76 676 aa12.53□□□□□ -0.4
CPNE8-207ENST00000550863 ACAP3Q96P50 834 aa12.53□□□□□ -0.4
CPNE8-207ENST00000550863 FIZ1Q96SL8 496 aa12.53□□□□□ -0.4
CPNE8-207ENST00000550863 RHOBTB2Q9BYZ6 727 aa12.53□□□□□ -0.4
CPNE8-207ENST00000550863 ZHX3Q9H4I2 956 aa12.53□□□□□ -0.4
CPNE8-207ENST00000550863 TBC1D17Q9HA65 648 aa12.53□□□□□ -0.4
CPNE8-207ENST00000550863 TOPORSQ9NS56 1045 aaPredicted RBP12.53□□□□□ -0.4
CPNE8-207ENST00000550863 TIMM13Q9Y5L4 95 aaPredicted RBP12.53□□□□□ -0.4
CPNE8-207ENST00000550863 CLIC4Q9Y696 253 aa12.53□□□□□ -0.4
CPNE8-207ENST00000550863 STK24Q9Y6E0 443 aa12.53□□□□□ -0.4
CPNE8-207ENST00000550863 FAM186AA6NE01 2351 aa12.53□□□□□ -0.4
CPNE8-207ENST00000550863 NCANO14594 1321 aa12.53□□□□□ -0.4
CPNE8-207ENST00000550863 RIF1Q5UIP0 2472 aaKnown RBP12.53□□□□□ -0.4
CPNE8-207ENST00000550863 TOM1L1O75674 476 aa12.52□□□□□ -0.41
CPNE8-207ENST00000550863 DCNP07585 359 aaKnown RBP12.52□□□□□ -0.41
CPNE8-207ENST00000550863 SRFP11831 508 aa12.52□□□□□ -0.41
CPNE8-207ENST00000550863 KCNE1P15382 129 aa12.52□□□□□ -0.41
CPNE8-207ENST00000550863 MARCKSP29966 332 aaPredicted RBP12.52□□□□□ -0.41
CPNE8-207ENST00000550863 MCM4P33991 863 aa12.52□□□□□ -0.41
CPNE8-207ENST00000550863 CCR2P41597 374 aa12.52□□□□□ -0.41
CPNE8-207ENST00000550863 MCL1Q07820 350 aa12.52□□□□□ -0.41
CPNE8-207ENST00000550863 ZC2HC1CQ53FD0 456 aaPredicted RBP12.52□□□□□ -0.41
CPNE8-207ENST00000550863 ARL6IP4Q66PJ3 421 aaKnown RBP12.52□□□□□ -0.41
CPNE8-207ENST00000550863 ELMSAN1Q6PJG2 1045 aa12.52□□□□□ -0.41
CPNE8-207ENST00000550863 FRMD5Q7Z6J6 570 aa12.52□□□□□ -0.41
CPNE8-207ENST00000550863 RAD54LQ92698 747 aa12.52□□□□□ -0.41
CPNE8-207ENST00000550863 TCEAL4Q96EI5 215 aa12.52□□□□□ -0.41
CPNE8-207ENST00000550863 EPSTI1Q96J88 318 aa12.52□□□□□ -0.41
CPNE8-207ENST00000550863 CLIC6Q96NY7 704 aa12.52□□□□□ -0.41
CPNE8-207ENST00000550863 FOXQ1Q9C009 403 aa12.52□□□□□ -0.41
CPNE8-207ENST00000550863 IGSF9Q9P2J2 1179 aa12.52□□□□□ -0.41
CPNE8-207ENST00000550863 DPP7Q9UHL4 492 aa12.52□□□□□ -0.41
CPNE8-207ENST00000550863 FBXL5Q9UKA1 691 aa12.52□□□□□ -0.41
CPNE8-207ENST00000550863 GVINP1Q7Z2Y8 2422 aa12.52□□□□□ -0.41
CPNE8-207ENST00000550863 ZNF638Q14966 1978 aaKnown RBP12.52□□□□□ -0.41
CPNE8-207ENST00000550863 ANKRD63C9JTQ0 380 aa12.51□□□□□ -0.41
CPNE8-207ENST00000550863 HNRNPDLO14979 420 aaKnown RBP12.51□□□□□ -0.41
CPNE8-207ENST00000550863 TBC1D4O60343 1298 aa12.51□□□□□ -0.41
CPNE8-207ENST00000550863 GFRA3O60609 400 aa12.51□□□□□ -0.41
CPNE8-207ENST00000550863 VNN2O95498 520 aa12.51□□□□□ -0.41
CPNE8-207ENST00000550863 HNRNPA1P09651 372 aaKnown RBP eCLIP12.51□□□□□ -0.41
CPNE8-207ENST00000550863 GPC5P78333 572 aa12.51□□□□□ -0.41
CPNE8-207ENST00000550863 CEBPZQ03701 1054 aaKnown RBP12.51□□□□□ -0.41
CPNE8-207ENST00000550863 RESTQ13127 1097 aa12.51□□□□□ -0.41
CPNE8-207ENST00000550863 PTPAQ15257 358 aa12.51□□□□□ -0.41
CPNE8-207ENST00000550863 ENOX2Q16206 610 aaKnown RBP12.51□□□□□ -0.41
CPNE8-207ENST00000550863 PABPC1LQ4VXU2 614 aaKnown RBP12.51□□□□□ -0.41
CPNE8-207ENST00000550863 CYP26C1Q6V0L0 522 aa12.51□□□□□ -0.41
CPNE8-207ENST00000550863 ANKS3Q6ZW76 656 aa12.51□□□□□ -0.41
CPNE8-207ENST00000550863 APBB1IPQ7Z5R6 666 aaPredicted RBP12.51□□□□□ -0.41
CPNE8-207ENST00000550863 HS6ST3Q8IZP7 471 aa12.51□□□□□ -0.41
CPNE8-207ENST00000550863 TTC9BQ8N6N2 239 aa12.51□□□□□ -0.41
CPNE8-207ENST00000550863 RASSF8Q8NHQ8 419 aa12.51□□□□□ -0.41
CPNE8-207ENST00000550863 KIF12Q96FN5 646 aa12.51□□□□□ -0.41
CPNE8-207ENST00000550863 NTPCRQ9BSD7 190 aaKnown RBP12.51□□□□□ -0.41
CPNE8-207ENST00000550863 FGFBP2Q9BYJ0 223 aa12.51□□□□□ -0.41
CPNE8-207ENST00000550863 PLA2G2FQ9BZM2 168 aa12.51□□□□□ -0.41
CPNE8-207ENST00000550863 CRISPLD1Q9H336 500 aa12.51□□□□□ -0.41
CPNE8-207ENST00000550863 C17orf75Q9HAS0 396 aa12.51□□□□□ -0.41
CPNE8-207ENST00000550863 UPF2Q9HAU5 1272 aaKnown RBP12.51□□□□□ -0.41
CPNE8-207ENST00000550863 ARHGEF3Q9NR81 526 aa12.51□□□□□ -0.41
CPNE8-207ENST00000550863 CDH7Q9ULB5 785 aa12.51□□□□□ -0.41
CPNE8-207ENST00000550863 RBM19Q9Y4C8 960 aaKnown RBP12.51□□□□□ -0.41
CPNE8-207ENST00000550863 NUB1Q9Y5A7 615 aa12.51□□□□□ -0.41
CPNE8-207ENST00000550863 BACE2Q9Y5Z0 518 aa12.51□□□□□ -0.41
CPNE8-207ENST00000550863 FRYLO94915 3013 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms