RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 CMTR2Q8IYT2 770 aaKnown RBP14.62□□□□□ -0.07
ERBB3-215ENST00000550828 C1orf127Q8N9H9 656 aa14.62□□□□□ -0.07
ERBB3-215ENST00000550828 MAFAQ8NHW3 353 aaPredicted RBP14.62□□□□□ -0.07
ERBB3-215ENST00000550828 RABGGTAQ92696 567 aa14.62□□□□□ -0.07
ERBB3-215ENST00000550828 TAB2Q9NYJ8 693 aa14.62□□□□□ -0.07
ERBB3-215ENST00000550828 SIX4Q9UIU6 781 aa14.62□□□□□ -0.07
ERBB3-215ENST00000550828 YBX2Q9Y2T7 364 aaKnown RBP14.62□□□□□ -0.07
ERBB3-215ENST00000550828 DERAQ9Y315 318 aa14.62□□□□□ -0.07
ERBB3-215ENST00000550828 C2CD2Q9Y426 696 aa14.62□□□□□ -0.07
ERBB3-215ENST00000550828 SMTNL1A8MU46 457 aa14.61□□□□□ -0.07
ERBB3-215ENST00000550828 LRRN2O75325 713 aa14.61□□□□□ -0.07
ERBB3-215ENST00000550828 VNN1O95497 513 aa14.61□□□□□ -0.07
ERBB3-215ENST00000550828 FGFR1OPO95684 399 aaKnown RBP14.61□□□□□ -0.07
ERBB3-215ENST00000550828 GNA14O95837 355 aa14.61□□□□□ -0.07
ERBB3-215ENST00000550828 C4BPAP04003 597 aaKnown RBP14.61□□□□□ -0.07
ERBB3-215ENST00000550828 THP07101 528 aa14.61□□□□□ -0.07
ERBB3-215ENST00000550828 PBX3P40426 434 aa14.61□□□□□ -0.07
ERBB3-215ENST00000550828 GCLMP48507 274 aa14.61□□□□□ -0.07
ERBB3-215ENST00000550828 TFAMQ00059 246 aaKnown RBP14.61□□□□□ -0.07
ERBB3-215ENST00000550828 DCAF17Q5H9S7 520 aaPredicted RBP14.61□□□□□ -0.07
ERBB3-215ENST00000550828 TDRD10Q5VZ19 366 aaKnown RBP14.61□□□□□ -0.07
ERBB3-215ENST00000550828 CD300LGQ6UXG3 332 aa14.61□□□□□ -0.07
ERBB3-215ENST00000550828 CD302Q8IX05 232 aa14.61□□□□□ -0.07
ERBB3-215ENST00000550828 COLGALT2Q8IYK4 626 aa14.61□□□□□ -0.07
ERBB3-215ENST00000550828 ABI1Q8IZP0 508 aa14.61□□□□□ -0.07
ERBB3-215ENST00000550828 URGCPQ8TCY9 931 aa14.61□□□□□ -0.07
ERBB3-215ENST00000550828 ELMO3Q96BJ8 720 aa14.61□□□□□ -0.07
ERBB3-215ENST00000550828 FAM161BQ96MY7 647 aa14.61□□□□□ -0.07
ERBB3-215ENST00000550828 YME1L1Q96TA2 773 aa14.61□□□□□ -0.07
ERBB3-215ENST00000550828 METTL14Q9HCE5 456 aaKnown RBP14.61□□□□□ -0.07
ERBB3-215ENST00000550828 LIMA1Q9UHB6 759 aaKnown RBP14.61□□□□□ -0.07
ERBB3-215ENST00000550828 CASTOR2A6NHX0 329 aa14.6□□□□□ -0.07
ERBB3-215ENST00000550828 TULP1O00294 542 aaPredicted RBP14.6□□□□□ -0.07
ERBB3-215ENST00000550828 TLL1O43897 1013 aa14.6□□□□□ -0.07
ERBB3-215ENST00000550828 KRT13P13646 458 aa14.6□□□□□ -0.07
ERBB3-215ENST00000550828 MTIF2P46199 727 aaKnown RBP14.6□□□□□ -0.07
ERBB3-215ENST00000550828 SLC11A1P49279 550 aa14.6□□□□□ -0.07
ERBB3-215ENST00000550828 TUSC3Q13454 348 aa14.6□□□□□ -0.07
ERBB3-215ENST00000550828 SURF1Q15526 300 aa14.6□□□□□ -0.07
ERBB3-215ENST00000550828 ZACNQ401N2 412 aa14.6□□□□□ -0.07
ERBB3-215ENST00000550828 TCERG1LQ5VWI1 586 aa14.6□□□□□ -0.07
ERBB3-215ENST00000550828 TMEM173Q86WV6 379 aaPredicted RBP14.6□□□□□ -0.07
ERBB3-215ENST00000550828 LRRC43Q8N309 656 aa14.6□□□□□ -0.07
ERBB3-215ENST00000550828 C3orf58Q8NDZ4 430 aa14.6□□□□□ -0.07
ERBB3-215ENST00000550828 BCL7CQ8WUZ0 217 aaPredicted RBP14.6□□□□□ -0.07
ERBB3-215ENST00000550828 FNBP1Q96RU3 617 aa14.6□□□□□ -0.07
ERBB3-215ENST00000550828 CDX2Q99626 313 aaPredicted RBP14.6□□□□□ -0.07
ERBB3-215ENST00000550828 RAD9AQ99638 391 aa14.6□□□□□ -0.07
ERBB3-215ENST00000550828 MMRN2Q9H8L6 949 aa14.6□□□□□ -0.07
ERBB3-215ENST00000550828 RNF216Q9NWF9 866 aaPredicted RBP14.6□□□□□ -0.07
ERBB3-215ENST00000550828 UBQLN1Q9UMX0 589 aaKnown RBP14.6□□□□□ -0.07
ERBB3-215ENST00000550828 MYO7AQ13402 2215 aa14.6□□□□□ -0.07
ERBB3-215ENST00000550828 ANO9A1A5B4 782 aa14.59□□□□□ -0.07
ERBB3-215ENST00000550828 LINC01553A4QN01 128 aa14.59□□□□□ -0.07
ERBB3-215ENST00000550828 BECN2A8MW95 431 aa14.59□□□□□ -0.07
ERBB3-215ENST00000550828 AP5Z1O43299 807 aa14.59□□□□□ -0.07
ERBB3-215ENST00000550828 ITGB1P05556 798 aa14.59□□□□□ -0.07
ERBB3-215ENST00000550828 TNNI1P19237 187 aa14.59□□□□□ -0.07
ERBB3-215ENST00000550828 EEF1GP26641 437 aaKnown RBP14.59□□□□□ -0.07
ERBB3-215ENST00000550828 FMO5P49326 533 aa14.59□□□□□ -0.07
ERBB3-215ENST00000550828 COPB1P53618 953 aaKnown RBP14.59□□□□□ -0.07
ERBB3-215ENST00000550828 KCNH2Q12809 1159 aa14.59□□□□□ -0.07
ERBB3-215ENST00000550828 BTG3Q14201 252 aaPredicted RBP14.59□□□□□ -0.07
ERBB3-215ENST00000550828 HSP90AA2PQ14568 343 aaPredicted RBP14.59□□□□□ -0.07
ERBB3-215ENST00000550828 MAN2A1Q16706 1144 aa14.59□□□□□ -0.07
ERBB3-215ENST00000550828 SV2AQ7L0J3 742 aa14.59□□□□□ -0.07
ERBB3-215ENST00000550828 TRAPPC11Q7Z392 1133 aa14.59□□□□□ -0.07
ERBB3-215ENST00000550828 NT5DC4Q86YG4 428 aa14.59□□□□□ -0.07
ERBB3-215ENST00000550828 CREBRFQ8IUR6 639 aa14.59□□□□□ -0.07
ERBB3-215ENST00000550828 FAM114A1Q8IWE2 563 aa14.59□□□□□ -0.07
ERBB3-215ENST00000550828 TAS1R2Q8TE23 839 aa14.59□□□□□ -0.07
ERBB3-215ENST00000550828 SEMA4DQ92854 862 aa14.59□□□□□ -0.07
ERBB3-215ENST00000550828 TSPAN18Q96SJ8 248 aa14.59□□□□□ -0.07
ERBB3-215ENST00000550828 TUBGCP2Q9BSJ2 902 aa14.59□□□□□ -0.07
ERBB3-215ENST00000550828 ZBED2Q9BTP6 218 aa14.59□□□□□ -0.07
ERBB3-215ENST00000550828 MRPL9Q9BYD2 267 aaKnown RBP14.59□□□□□ -0.07
ERBB3-215ENST00000550828 MARCH5Q9NX47 278 aa14.59□□□□□ -0.07
ERBB3-215ENST00000550828 DPP3Q9NY33 737 aa14.59□□□□□ -0.07
ERBB3-215ENST00000550828 INSL6Q9Y581 213 aa14.59□□□□□ -0.07
ERBB3-215ENST00000550828 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.59□□□□□ -0.07
ERBB3-215ENST00000550828 ZC3H11AO75152 810 aaKnown RBP eCLIP14.58□□□□□ -0.08
ERBB3-215ENST00000550828 CST3P01034 146 aaPredicted RBP14.58□□□□□ -0.08
ERBB3-215ENST00000550828 ITGB3P05106 788 aa14.58□□□□□ -0.08
ERBB3-215ENST00000550828 GALTP07902 379 aa14.58□□□□□ -0.08
ERBB3-215ENST00000550828 TMEM191BP0C7N4 346 aa14.58□□□□□ -0.08
ERBB3-215ENST00000550828 CYP3A5P20815 502 aa14.58□□□□□ -0.08
ERBB3-215ENST00000550828 LRPAP1P30533 357 aa14.58□□□□□ -0.08
ERBB3-215ENST00000550828 POLR2BP30876 1174 aaKnown RBP14.58□□□□□ -0.08
ERBB3-215ENST00000550828 CLCNKBP51801 687 aa14.58□□□□□ -0.08
ERBB3-215ENST00000550828 BCAR1P56945 870 aa14.58□□□□□ -0.08
ERBB3-215ENST00000550828 SMAD3P84022 425 aaKnown RBP14.58□□□□□ -0.08
ERBB3-215ENST00000550828 DUOXA2Q1HG44 320 aa14.58□□□□□ -0.08
ERBB3-215ENST00000550828 C9orf57Q5W0N0 161 aa14.58□□□□□ -0.08
ERBB3-215ENST00000550828 BEST2Q8NFU1 509 aa14.58□□□□□ -0.08
ERBB3-215ENST00000550828 CLP1Q92989 425 aaKnown RBP14.58□□□□□ -0.08
ERBB3-215ENST00000550828 ANKRD36BP1Q96IX9 119 aa14.58□□□□□ -0.08
ERBB3-215ENST00000550828 PBX4Q9BYU1 374 aa14.58□□□□□ -0.08
ERBB3-215ENST00000550828 VPS16Q9H269 839 aa14.58□□□□□ -0.08
ERBB3-215ENST00000550828 TMEM8AQ9HCN3 771 aa14.58□□□□□ -0.08
ERBB3-215ENST00000550828 KANSL3Q9P2N6 904 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms