RNA–Protein interactions for RNA: ENST00000550589.1

CCDC59-204, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-204ENST00000550589 PHACTR2O75167 634 aa4.69□□□□□ -1.66
CCDC59-204ENST00000550589 RTN2O75298 545 aa4.69□□□□□ -1.66
CCDC59-204ENST00000550589 RPS6KA5O75582 802 aa4.69□□□□□ -1.66
CCDC59-204ENST00000550589 MYCLP12524 364 aaPredicted RBP4.69□□□□□ -1.66
CCDC59-204ENST00000550589 DPEP1P16444 411 aa4.69□□□□□ -1.66
CCDC59-204ENST00000550589 PDE6CP51160 858 aa4.69□□□□□ -1.66
CCDC59-204ENST00000550589 HADHBP55084 474 aaKnown RBP4.69□□□□□ -1.66
CCDC59-204ENST00000550589 NCKAP1LP55160 1127 aa4.69□□□□□ -1.66
CCDC59-204ENST00000550589 ZNF280AP59817 542 aaPredicted RBP4.69□□□□□ -1.66
CCDC59-204ENST00000550589 JAG1P78504 1218 aa4.69□□□□□ -1.66
CCDC59-204ENST00000550589 STRN3Q13033 797 aa4.69□□□□□ -1.66
CCDC59-204ENST00000550589 COG2Q14746 738 aa4.69□□□□□ -1.66
CCDC59-204ENST00000550589 SHROOM1Q2M3G4 852 aaPredicted RBP4.69□□□□□ -1.66
CCDC59-204ENST00000550589 NBPF9Q3BBW0 867 aa4.69□□□□□ -1.66
CCDC59-204ENST00000550589 BRDTQ58F21 947 aaPredicted RBP4.69□□□□□ -1.66
CCDC59-204ENST00000550589 SPDYCQ5MJ68 293 aa4.69□□□□□ -1.66
CCDC59-204ENST00000550589 FAM102BQ5T8I3 360 aa4.69□□□□□ -1.66
CCDC59-204ENST00000550589 SLFN12LQ6IEE8 588 aa4.69□□□□□ -1.66
CCDC59-204ENST00000550589 MIS18BP1Q6P0N0 1132 aa4.69□□□□□ -1.66
CCDC59-204ENST00000550589 NSMFQ6X4W1 530 aa4.69□□□□□ -1.66
CCDC59-204ENST00000550589 SLFN11Q7Z7L1 901 aa4.69□□□□□ -1.66
CCDC59-204ENST00000550589 SPATS2Q86XZ4 545 aaKnown RBP4.69□□□□□ -1.66
CCDC59-204ENST00000550589 MREGQ8N565 214 aa4.69□□□□□ -1.66
CCDC59-204ENST00000550589 TRIM11Q96F44 468 aa4.69□□□□□ -1.66
CCDC59-204ENST00000550589 ZBED3Q96IU2 234 aaPredicted RBP4.69□□□□□ -1.66
CCDC59-204ENST00000550589 RPS6KC1Q96S38 1066 aa4.69□□□□□ -1.66
CCDC59-204ENST00000550589 KRT12Q99456 494 aa4.69□□□□□ -1.66
CCDC59-204ENST00000550589 MDFIQ99750 246 aa4.69□□□□□ -1.66
CCDC59-204ENST00000550589 AGPAT1Q99943 283 aa4.69□□□□□ -1.66
CCDC59-204ENST00000550589 PDCD2LQ9BRP1 358 aa4.69□□□□□ -1.66
CCDC59-204ENST00000550589 STRA6Q9BX79 667 aa4.69□□□□□ -1.66
CCDC59-204ENST00000550589 FAM129AQ9BZQ8 928 aa4.69□□□□□ -1.66
CCDC59-204ENST00000550589 INTS2Q9H0H0 1204 aaKnown RBP4.69□□□□□ -1.66
CCDC59-204ENST00000550589 ISCUQ9H1K1 167 aa4.69□□□□□ -1.66
CCDC59-204ENST00000550589 RAVER2Q9HCJ3 691 aaKnown RBP4.69□□□□□ -1.66
CCDC59-204ENST00000550589 UBE2TQ9NPD8 197 aaPredicted RBP4.69□□□□□ -1.66
CCDC59-204ENST00000550589 PXMP2Q9NR77 195 aa4.69□□□□□ -1.66
CCDC59-204ENST00000550589 RBM12Q9NTZ6 932 aaKnown RBP4.69□□□□□ -1.66
CCDC59-204ENST00000550589 HSPBP1Q9NZL4 362 aa4.69□□□□□ -1.66
CCDC59-204ENST00000550589 LCMT1Q9UIC8 334 aa4.69□□□□□ -1.66
CCDC59-204ENST00000550589 SALL4Q9UJQ4 1053 aa4.69□□□□□ -1.66
CCDC59-204ENST00000550589 ZHX1Q9UKY1 873 aaPredicted RBP4.69□□□□□ -1.66
CCDC59-204ENST00000550589 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.69□□□□□ -1.66
CCDC59-204ENST00000550589 ZNF536O15090 1300 aa4.68□□□□□ -1.66
CCDC59-204ENST00000550589 NFASCO94856 1347 aa4.68□□□□□ -1.66
CCDC59-204ENST00000550589 EMSYQ7Z589 1322 aa4.68□□□□□ -1.66
CCDC59-204ENST00000550589 MYPNQ86TC9 1320 aa4.68□□□□□ -1.66
CCDC59-204ENST00000550589 HMGB1P1B2RPK0 211 aaPredicted RBP4.68□□□□□ -1.66
CCDC59-204ENST00000550589 VWA5AO00534 786 aa4.68□□□□□ -1.66
CCDC59-204ENST00000550589 NFIBO00712 420 aa4.68□□□□□ -1.66
CCDC59-204ENST00000550589 ATP2A1O14983 1001 aa4.68□□□□□ -1.66
CCDC59-204ENST00000550589 NKRFO15226 690 aaKnown RBP eCLIP4.68□□□□□ -1.66
CCDC59-204ENST00000550589 DHX15O43143 795 aaKnown RBP4.68□□□□□ -1.66
CCDC59-204ENST00000550589 SART1O43290 800 aaKnown RBP4.68□□□□□ -1.66
CCDC59-204ENST00000550589 MYZAPP0CAP1 466 aa4.68□□□□□ -1.66
CCDC59-204ENST00000550589 VCAM1P19320 739 aa4.68□□□□□ -1.66
CCDC59-204ENST00000550589 EIF2AK2P19525 551 aaKnown RBP4.68□□□□□ -1.66
CCDC59-204ENST00000550589 GARTP22102 1010 aa4.68□□□□□ -1.66
CCDC59-204ENST00000550589 CNGA1P29973 690 aa4.68□□□□□ -1.66
CCDC59-204ENST00000550589 INPP5BP32019 993 aa4.68□□□□□ -1.66
CCDC59-204ENST00000550589 CETN2P41208 172 aa4.68□□□□□ -1.66
CCDC59-204ENST00000550589 DNA2P51530 1060 aa4.68□□□□□ -1.66
CCDC59-204ENST00000550589 GALCP54803 685 aa4.68□□□□□ -1.66
CCDC59-204ENST00000550589 EIF3BP55884 814 aaKnown RBP4.68□□□□□ -1.66
CCDC59-204ENST00000550589 PEX3P56589 373 aa4.68□□□□□ -1.66
CCDC59-204ENST00000550589 KCNA1Q09470 495 aa4.68□□□□□ -1.66
CCDC59-204ENST00000550589 DHX34Q14147 1143 aaKnown RBP4.68□□□□□ -1.66
CCDC59-204ENST00000550589 KIF22Q14807 665 aa4.68□□□□□ -1.66
CCDC59-204ENST00000550589 TCEAL1Q15170 157 aa4.68□□□□□ -1.66
CCDC59-204ENST00000550589 SNRNP35Q16560 246 aaKnown RBP4.68□□□□□ -1.66
CCDC59-204ENST00000550589 ARHGAP44Q17R89 818 aa4.68□□□□□ -1.66
CCDC59-204ENST00000550589 XKR3Q5GH77 459 aa4.68□□□□□ -1.66
CCDC59-204ENST00000550589 KIAA1755Q5JYT7 1200 aa4.68□□□□□ -1.66
CCDC59-204ENST00000550589 SEL1L2Q5TEA6 688 aa4.68□□□□□ -1.66
CCDC59-204ENST00000550589 MAEAQ7L5Y9 396 aa4.68□□□□□ -1.66
CCDC59-204ENST00000550589 VSIG10LQ86VR7 867 aa4.68□□□□□ -1.66
CCDC59-204ENST00000550589 ZNF677Q86XU0 584 aa4.68□□□□□ -1.66
CCDC59-204ENST00000550589 MAP4K3Q8IVH8 894 aa4.68□□□□□ -1.66
CCDC59-204ENST00000550589 GLYCTKQ8IVS8 523 aa4.68□□□□□ -1.66
CCDC59-204ENST00000550589 SCYL3Q8IZE3 742 aa4.68□□□□□ -1.66
CCDC59-204ENST00000550589 RASGEF1CQ8N431 466 aa4.68□□□□□ -1.66
CCDC59-204ENST00000550589 LRRC57Q8N9N7 239 aa4.68□□□□□ -1.66
CCDC59-204ENST00000550589 FBXL13Q8NEE6 735 aa4.68□□□□□ -1.66
CCDC59-204ENST00000550589 DNERQ8NFT8 737 aa4.68□□□□□ -1.66
CCDC59-204ENST00000550589 SLC30A5Q8TAD4 765 aa4.68□□□□□ -1.66
CCDC59-204ENST00000550589 SLC35G2Q8TBE7 412 aa4.68□□□□□ -1.66
CCDC59-204ENST00000550589 SCFD2Q8WU76 684 aa4.68□□□□□ -1.66
CCDC59-204ENST00000550589 CLEC4DQ8WXI8 215 aa4.68□□□□□ -1.66
CCDC59-204ENST00000550589 DHX38Q92620 1227 aaKnown RBP4.68□□□□□ -1.66
CCDC59-204ENST00000550589 HES6Q96HZ4 224 aa4.68□□□□□ -1.66
CCDC59-204ENST00000550589 CEP170P1Q96L14 293 aa4.68□□□□□ -1.66
CCDC59-204ENST00000550589 NT5C1BQ96P26 610 aa4.68□□□□□ -1.66
CCDC59-204ENST00000550589 FNBP1Q96RU3 617 aa4.68□□□□□ -1.66
CCDC59-204ENST00000550589 FIZ1Q96SL8 496 aa4.68□□□□□ -1.66
CCDC59-204ENST00000550589 TEX13BQ9BXU2 312 aa4.68□□□□□ -1.66
CCDC59-204ENST00000550589 SAP130Q9H0E3 1048 aa4.68□□□□□ -1.66
CCDC59-204ENST00000550589 WNT8AQ9H1J5 351 aa4.68□□□□□ -1.66
CCDC59-204ENST00000550589 RPAP3Q9H6T3 665 aaPredicted RBP4.68□□□□□ -1.66
CCDC59-204ENST00000550589 ACAD9Q9H845 621 aa4.68□□□□□ -1.66
CCDC59-204ENST00000550589 SUGCTQ9HAC7 445 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms