RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 ZMAT2Q96NC0 199 aaKnown RBP11.87□□□□□ -0.51
VTI1BP3-201ENST00000550220 MYADMQ96S97 322 aa11.87□□□□□ -0.51
VTI1BP3-201ENST00000550220 TBX20Q9UMR3 447 aa11.87□□□□□ -0.51
VTI1BP3-201ENST00000550220 VPS37CA5D8V6 355 aaPredicted RBP11.86□□□□□ -0.51
VTI1BP3-201ENST00000550220 N4BP1O75113 896 aaKnown RBP11.86□□□□□ -0.51
VTI1BP3-201ENST00000550220 ABLIM3O94929 683 aa11.86□□□□□ -0.51
VTI1BP3-201ENST00000550220 PDGFBP01127 241 aaPredicted RBP11.86□□□□□ -0.51
VTI1BP3-201ENST00000550220 HARSP12081 509 aaKnown RBP11.86□□□□□ -0.51
VTI1BP3-201ENST00000550220 PDIA4P13667 645 aaKnown RBP11.86□□□□□ -0.51
VTI1BP3-201ENST00000550220 AOC1P19801 751 aa11.86□□□□□ -0.51
VTI1BP3-201ENST00000550220 POU5F1Q01860 360 aaKnown RBP11.86□□□□□ -0.51
VTI1BP3-201ENST00000550220 PPP2R3AQ06190 1150 aa11.86□□□□□ -0.51
VTI1BP3-201ENST00000550220 SOX4Q06945 474 aaPredicted RBP11.86□□□□□ -0.51
VTI1BP3-201ENST00000550220 MRPL58Q14197 206 aaKnown RBP11.86□□□□□ -0.51
VTI1BP3-201ENST00000550220 VARS2Q5ST30 1063 aaKnown RBP11.86□□□□□ -0.51
VTI1BP3-201ENST00000550220 SLFN12LQ6IEE8 588 aa11.86□□□□□ -0.51
VTI1BP3-201ENST00000550220 GRASPQ7Z6J2 395 aaPredicted RBP11.86□□□□□ -0.51
VTI1BP3-201ENST00000550220 FLCNQ8NFG4 579 aa11.86□□□□□ -0.51
VTI1BP3-201ENST00000550220 SLC7A14Q8TBB6 771 aa11.86□□□□□ -0.51
VTI1BP3-201ENST00000550220 LARP4BQ92615 738 aaKnown RBP11.86□□□□□ -0.51
VTI1BP3-201ENST00000550220 ATOH1Q92858 354 aaPredicted RBP11.86□□□□□ -0.51
VTI1BP3-201ENST00000550220 SHDQ96IW2 340 aa11.86□□□□□ -0.51
VTI1BP3-201ENST00000550220 ZBTB45Q96K62 511 aaPredicted RBP11.86□□□□□ -0.51
VTI1BP3-201ENST00000550220 SUSD3Q96L08 255 aa11.86□□□□□ -0.51
VTI1BP3-201ENST00000550220 REEP2Q9BRK0 252 aa11.86□□□□□ -0.51
VTI1BP3-201ENST00000550220 GOLGA2P5Q9HBQ8 144 aa11.86□□□□□ -0.51
VTI1BP3-201ENST00000550220 AVENQ9NQS1 362 aaPredicted RBP11.86□□□□□ -0.51
VTI1BP3-201ENST00000550220 SLC2A4RGQ9NR83 387 aa11.86□□□□□ -0.51
VTI1BP3-201ENST00000550220 STK17AQ9UEE5 414 aa11.86□□□□□ -0.51
VTI1BP3-201ENST00000550220 UBQLN1Q9UMX0 589 aaKnown RBP11.86□□□□□ -0.51
VTI1BP3-201ENST00000550220 POLIQ9UNA4 740 aa11.86□□□□□ -0.51
VTI1BP3-201ENST00000550220 MYO10Q9HD67 2058 aa11.86□□□□□ -0.51
VTI1BP3-201ENST00000550220 CACNA1HO95180 2353 aa11.86□□□□□ -0.51
VTI1BP3-201ENST00000550220 NPHP3-ACAD11A0A0J9YXS1 232 aa11.85□□□□□ -0.51
VTI1BP3-201ENST00000550220 TTC26A0AVF1 554 aa11.85□□□□□ -0.51
VTI1BP3-201ENST00000550220 ARHGEF37A1IGU5 675 aa11.85□□□□□ -0.51
VTI1BP3-201ENST00000550220 K7ENM7 598 aa11.85□□□□□ -0.51
VTI1BP3-201ENST00000550220 PRRG1O14668 218 aa11.85□□□□□ -0.51
VTI1BP3-201ENST00000550220 OGTO15294 1046 aa11.85□□□□□ -0.51
VTI1BP3-201ENST00000550220 CCL16O15467 120 aa11.85□□□□□ -0.51
VTI1BP3-201ENST00000550220 ADAM12O43184 909 aa11.85□□□□□ -0.51
VTI1BP3-201ENST00000550220 LRG1P02750 347 aa11.85□□□□□ -0.51
VTI1BP3-201ENST00000550220 ATF2P15336 505 aa11.85□□□□□ -0.51
VTI1BP3-201ENST00000550220 PTPN2P17706 415 aa11.85□□□□□ -0.51
VTI1BP3-201ENST00000550220 PLCG1P19174 1290 aa11.85□□□□□ -0.51
VTI1BP3-201ENST00000550220 RFX1P22670 979 aa11.85□□□□□ -0.51
VTI1BP3-201ENST00000550220 LRPAP1P30533 357 aa11.85□□□□□ -0.51
VTI1BP3-201ENST00000550220 MCM4P33991 863 aa11.85□□□□□ -0.51
VTI1BP3-201ENST00000550220 BRCC3P46736 316 aa11.85□□□□□ -0.51
VTI1BP3-201ENST00000550220 GTF2BQ00403 316 aa11.85□□□□□ -0.51
VTI1BP3-201ENST00000550220 DHX8Q14562 1220 aaKnown RBP11.85□□□□□ -0.51
VTI1BP3-201ENST00000550220 PABPC1LQ4VXU2 614 aaKnown RBP11.85□□□□□ -0.51
VTI1BP3-201ENST00000550220 ZNF280DQ6N043 979 aa11.85□□□□□ -0.51
VTI1BP3-201ENST00000550220 TCEAL8Q8IYN2 117 aa11.85□□□□□ -0.51
VTI1BP3-201ENST00000550220 SIX5Q8N196 739 aa11.85□□□□□ -0.51
VTI1BP3-201ENST00000550220 ELMOD1Q8N336 334 aa11.85□□□□□ -0.51
VTI1BP3-201ENST00000550220 C3orf58Q8NDZ4 430 aa11.85□□□□□ -0.51
VTI1BP3-201ENST00000550220 FEZF2Q8TBJ5 459 aa11.85□□□□□ -0.51
VTI1BP3-201ENST00000550220 FGF13Q92913 245 aa11.85□□□□□ -0.51
VTI1BP3-201ENST00000550220 SMOC2Q9H3U7 446 aa11.85□□□□□ -0.51
VTI1BP3-201ENST00000550220 ST6GALNAC4Q9H4F1 302 aa11.85□□□□□ -0.51
VTI1BP3-201ENST00000550220 ZHX3Q9H4I2 956 aa11.85□□□□□ -0.51
VTI1BP3-201ENST00000550220 ZSCAN16Q9H4T2 348 aaPredicted RBP11.85□□□□□ -0.51
VTI1BP3-201ENST00000550220 RPF1Q9H9Y2 349 aaKnown RBP11.85□□□□□ -0.51
VTI1BP3-201ENST00000550220 BLOC1S4Q9NUP1 217 aa11.85□□□□□ -0.51
VTI1BP3-201ENST00000550220 GDE1Q9NZC3 331 aa11.85□□□□□ -0.51
VTI1BP3-201ENST00000550220 PCDHB8Q9UN66 801 aa11.85□□□□□ -0.51
VTI1BP3-201ENST00000550220 SRPRBQ9Y5M8 271 aaKnown RBP11.85□□□□□ -0.51
VTI1BP3-201ENST00000550220 MORC2Q9Y6X9 1032 aaPredicted RBP11.85□□□□□ -0.51
VTI1BP3-201ENST00000550220 TDRD15B5MCY1 1934 aaKnown RBP11.85□□□□□ -0.51
VTI1BP3-201ENST00000550220 A0A0B4J269 797 aa11.84□□□□□ -0.51
VTI1BP3-201ENST00000550220 STK25O00506 426 aa11.84□□□□□ -0.51
VTI1BP3-201ENST00000550220 ZNF197O14709 1029 aa11.84□□□□□ -0.51
VTI1BP3-201ENST00000550220 TBC1D4O60343 1298 aa11.84□□□□□ -0.51
VTI1BP3-201ENST00000550220 MICAL2O94851 1124 aa11.84□□□□□ -0.51
VTI1BP3-201ENST00000550220 OAZ2O95190 189 aa11.84□□□□□ -0.51
VTI1BP3-201ENST00000550220 ADRB2P07550 413 aa11.84□□□□□ -0.51
VTI1BP3-201ENST00000550220 PFKPQ01813 784 aa11.84□□□□□ -0.51
VTI1BP3-201ENST00000550220 ROR1Q01973 937 aa11.84□□□□□ -0.51
VTI1BP3-201ENST00000550220 CACNB1Q02641 598 aaPredicted RBP11.84□□□□□ -0.51
VTI1BP3-201ENST00000550220 HTR4Q13639 388 aa11.84□□□□□ -0.51
VTI1BP3-201ENST00000550220 MCM6Q14566 821 aa11.84□□□□□ -0.51
VTI1BP3-201ENST00000550220 KARSQ15046 597 aaKnown RBP11.84□□□□□ -0.51
VTI1BP3-201ENST00000550220 POSTNQ15063 836 aa11.84□□□□□ -0.51
VTI1BP3-201ENST00000550220 ZBTB6Q15916 424 aa11.84□□□□□ -0.51
VTI1BP3-201ENST00000550220 CTXN3Q4LDR2 81 aa11.84□□□□□ -0.51
VTI1BP3-201ENST00000550220 PHLDB3Q6NSJ2 640 aa11.84□□□□□ -0.51
VTI1BP3-201ENST00000550220 USP37Q86T82 979 aa11.84□□□□□ -0.51
VTI1BP3-201ENST00000550220 TMEM105Q8N8V8 129 aa11.84□□□□□ -0.51
VTI1BP3-201ENST00000550220 LEMD2Q8NC56 503 aa11.84□□□□□ -0.51
VTI1BP3-201ENST00000550220 RSAD2Q8WXG1 361 aa11.84□□□□□ -0.51
VTI1BP3-201ENST00000550220 DDX12PQ92771 950 aa11.84□□□□□ -0.51
VTI1BP3-201ENST00000550220 C18orf25Q96B23 403 aaPredicted RBP11.84□□□□□ -0.51
VTI1BP3-201ENST00000550220 HVCN1Q96D96 273 aa11.84□□□□□ -0.51
VTI1BP3-201ENST00000550220 KIF12Q96FN5 646 aa11.84□□□□□ -0.51
VTI1BP3-201ENST00000550220 MSTO1Q9BUK6 570 aa11.84□□□□□ -0.51
VTI1BP3-201ENST00000550220 CYP4F11Q9HBI6 524 aa11.84□□□□□ -0.51
VTI1BP3-201ENST00000550220 SEL1LQ9UBV2 794 aa11.84□□□□□ -0.51
VTI1BP3-201ENST00000550220 FBXL5Q9UKA1 691 aa11.84□□□□□ -0.51
VTI1BP3-201ENST00000550220 EXOC7Q9UPT5 735 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms