RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 TAS2R14Q9NYV8 317 aa15.9■□□□□ 0.14
CUX1-214ENST00000550008 AIPL1Q9NZN9 384 aa15.9■□□□□ 0.14
CUX1-214ENST00000550008 SETD1AO15047 1707 aaKnown RBP15.89■□□□□ 0.14
CUX1-214ENST00000550008 GMNCA6NCL1 334 aa15.89■□□□□ 0.14
CUX1-214ENST00000550008 PSMD6Q15008 389 aa15.89■□□□□ 0.14
CUX1-214ENST00000550008 KCNT1Q5JUK3 1230 aa15.89■□□□□ 0.14
CUX1-214ENST00000550008 RWDD4Q6NW29 188 aaKnown RBP15.89■□□□□ 0.14
CUX1-214ENST00000550008 TRIM72Q6ZMU5 477 aa15.89■□□□□ 0.14
CUX1-214ENST00000550008 PPM1NQ8N819 430 aa15.89■□□□□ 0.14
CUX1-214ENST00000550008 CHST13Q8NET6 341 aa15.89■□□□□ 0.14
CUX1-214ENST00000550008 MDM1Q8TC05 714 aa15.89■□□□□ 0.14
CUX1-214ENST00000550008 ASNSD1Q9NWL6 643 aa15.89■□□□□ 0.14
CUX1-214ENST00000550008 SLC29A2Q14542 456 aa15.89■□□□□ 0.13
CUX1-214ENST00000550008 ARHGEF26Q96DR7 871 aa15.89■□□□□ 0.13
CUX1-214ENST00000550008 RNF19AQ9NV58 838 aa15.89■□□□□ 0.13
CUX1-214ENST00000550008 CCL15-CCL14A0A0B4J2E2 113 aa15.89■□□□□ 0.13
CUX1-214ENST00000550008 PABPN1LA6NDY0 278 aaKnown RBP15.89■□□□□ 0.13
CUX1-214ENST00000550008 PHF20L1A8MW92 1017 aa15.89■□□□□ 0.13
CUX1-214ENST00000550008 ZBTB22O15209 634 aa15.89■□□□□ 0.13
CUX1-214ENST00000550008 PPP1R37O75864 691 aa15.89■□□□□ 0.13
CUX1-214ENST00000550008 SNHG28P0DPA3 235 aa15.89■□□□□ 0.13
CUX1-214ENST00000550008 MRPS9P82933 396 aaKnown RBP15.89■□□□□ 0.13
CUX1-214ENST00000550008 CCL15Q16663 113 aa15.89■□□□□ 0.13
CUX1-214ENST00000550008 P3H1Q32P28 736 aa15.89■□□□□ 0.13
CUX1-214ENST00000550008 PDZD4Q76G19 769 aaPredicted RBP15.89■□□□□ 0.13
CUX1-214ENST00000550008 NLRP14Q86W24 1093 aa15.89■□□□□ 0.13
CUX1-214ENST00000550008 BEST2Q8NFU1 509 aa15.89■□□□□ 0.13
CUX1-214ENST00000550008 ATL2Q8NHH9 583 aa15.89■□□□□ 0.13
CUX1-214ENST00000550008 SCFD2Q8WU76 684 aa15.89■□□□□ 0.13
CUX1-214ENST00000550008 SNF8Q96H20 258 aa15.89■□□□□ 0.13
CUX1-214ENST00000550008 MTFR1LQ9H019 292 aa15.89■□□□□ 0.13
CUX1-214ENST00000550008 GJB6O95452 261 aa15.89■□□□□ 0.13
CUX1-214ENST00000550008 ITGB3P05106 788 aa15.89■□□□□ 0.13
CUX1-214ENST00000550008 PBX1P40424 430 aa15.89■□□□□ 0.13
CUX1-214ENST00000550008 ARL4CP56559 192 aa15.89■□□□□ 0.13
CUX1-214ENST00000550008 NXNQ6DKJ4 435 aa15.89■□□□□ 0.13
CUX1-214ENST00000550008 TATDN1Q6P1N9 297 aa15.89■□□□□ 0.13
CUX1-214ENST00000550008 WDR93Q6P2C0 686 aa15.89■□□□□ 0.13
CUX1-214ENST00000550008 CREG2Q8IUH2 290 aa15.89■□□□□ 0.13
CUX1-214ENST00000550008 FBXO25Q8TCJ0 367 aa15.89■□□□□ 0.13
CUX1-214ENST00000550008 P2RX7Q99572 595 aaKnown RBP15.89■□□□□ 0.13
CUX1-214ENST00000550008 GCOM2Q9BZD3 368 aaPredicted RBP15.89■□□□□ 0.13
CUX1-214ENST00000550008 RANBP17Q9H2T7 1088 aaKnown RBP15.89■□□□□ 0.13
CUX1-214ENST00000550008 GTF3C4Q9UKN8 822 aa15.89■□□□□ 0.13
CUX1-214ENST00000550008 ASTN1O14525 1302 aa15.88■□□□□ 0.13
CUX1-214ENST00000550008 A0A087WUV0 522 aaPredicted RBP15.88■□□□□ 0.13
CUX1-214ENST00000550008 ARHGAP42A6NI28 874 aa15.88■□□□□ 0.13
CUX1-214ENST00000550008 VTNP04004 478 aa15.88■□□□□ 0.13
CUX1-214ENST00000550008 FAM153BP0C7A2 387 aa15.88■□□□□ 0.13
CUX1-214ENST00000550008 HSD17B3P37058 310 aa15.88■□□□□ 0.13
CUX1-214ENST00000550008 CDR2Q01850 454 aa15.88■□□□□ 0.13
CUX1-214ENST00000550008 SGSM1Q2NKQ1 1148 aa15.88■□□□□ 0.13
CUX1-214ENST00000550008 MAP7D1Q3KQU3 841 aa15.88■□□□□ 0.13
CUX1-214ENST00000550008 FAM153CQ494X1 144 aa15.88■□□□□ 0.13
CUX1-214ENST00000550008 MEI1Q5TIA1 1274 aa15.88■□□□□ 0.13
CUX1-214ENST00000550008 ARMCX2Q7L311 632 aa15.88■□□□□ 0.13
CUX1-214ENST00000550008 CCDC33Q8N5R6 958 aa15.88■□□□□ 0.13
CUX1-214ENST00000550008 BAP1Q92560 729 aa15.88■□□□□ 0.13
CUX1-214ENST00000550008 PITPNM3Q9BZ71 974 aa15.88■□□□□ 0.13
CUX1-214ENST00000550008 CARD9Q9H257 536 aa15.88■□□□□ 0.13
CUX1-214ENST00000550008 VIPAS39Q9H9C1 493 aa15.88■□□□□ 0.13
CUX1-214ENST00000550008 KLK14Q9P0G3 267 aa15.88■□□□□ 0.13
CUX1-214ENST00000550008 FAM153AQ9UHL3 310 aa15.88■□□□□ 0.13
CUX1-214ENST00000550008 ASTN2O75129 1339 aaPredicted RBP15.88■□□□□ 0.13
CUX1-214ENST00000550008 FRMPD4Q14CM0 1322 aa15.88■□□□□ 0.13
CUX1-214ENST00000550008 IRAK1P51617 712 aa15.88■□□□□ 0.13
CUX1-214ENST00000550008 CUL2Q13617 745 aa15.88■□□□□ 0.13
CUX1-214ENST00000550008 TFDP2Q14188 446 aa15.88■□□□□ 0.13
CUX1-214ENST00000550008 RAPH1Q70E73 1250 aa15.88■□□□□ 0.13
CUX1-214ENST00000550008 MOB2Q70IA6 237 aa15.88■□□□□ 0.13
CUX1-214ENST00000550008 CCDC60Q8IWA6 550 aaPredicted RBP15.88■□□□□ 0.13
CUX1-214ENST00000550008 TEX2Q8IWB9 1127 aa15.88■□□□□ 0.13
CUX1-214ENST00000550008 SCN4BQ8IWT1 228 aa15.88■□□□□ 0.13
CUX1-214ENST00000550008 CDKL2Q92772 493 aa15.88■□□□□ 0.13
CUX1-214ENST00000550008 C6orf222P0C671 652 aaPredicted RBP15.88■□□□□ 0.13
CUX1-214ENST00000550008 ANXA13P27216 316 aa15.88■□□□□ 0.13
CUX1-214ENST00000550008 AADACL2Q6P093 401 aa15.88■□□□□ 0.13
CUX1-214ENST00000550008 PCGF5Q86SE9 256 aa15.88■□□□□ 0.13
CUX1-214ENST00000550008 RBM15Q96T37 977 aaKnown RBP eCLIP15.88■□□□□ 0.131e-11■■■■□ 21.9
CUX1-214ENST00000550008 HSD17B14Q9BPX1 270 aa15.88■□□□□ 0.13
CUX1-214ENST00000550008 SENP7Q9BQF6 1050 aa15.88■□□□□ 0.13
CUX1-214ENST00000550008 DCTN4Q9UJW0 460 aa15.88■□□□□ 0.13
CUX1-214ENST00000550008 TOM1L1O75674 476 aa15.87■□□□□ 0.13
CUX1-214ENST00000550008 CIB2O75838 187 aa15.87■□□□□ 0.13
CUX1-214ENST00000550008 KRT7P08729 469 aa15.87■□□□□ 0.13
CUX1-214ENST00000550008 DSG3P32926 999 aa15.87■□□□□ 0.13
CUX1-214ENST00000550008 MYL6P60660 151 aa15.87■□□□□ 0.13
CUX1-214ENST00000550008 TMEM132DQ14C87 1099 aa15.87■□□□□ 0.13
CUX1-214ENST00000550008 SLC13A5Q86YT5 568 aaPredicted RBP15.87■□□□□ 0.13
CUX1-214ENST00000550008 ZSWIM1Q9BR11 485 aa15.87■□□□□ 0.13
CUX1-214ENST00000550008 NIF3L1Q9GZT8 377 aa15.87■□□□□ 0.13
CUX1-214ENST00000550008 ISCUQ9H1K1 167 aa15.87■□□□□ 0.13
CUX1-214ENST00000550008 BCL9LQ86UU0 1499 aa15.87■□□□□ 0.13
CUX1-214ENST00000550008 MYBL1P10243 752 aa15.87■□□□□ 0.13
CUX1-214ENST00000550008 PTPRAP18433 802 aa15.87■□□□□ 0.13
CUX1-214ENST00000550008 CYP24A1Q07973 514 aa15.87■□□□□ 0.13
CUX1-214ENST00000550008 EFCAB13Q8IY85 973 aa15.87■□□□□ 0.13
CUX1-214ENST00000550008 PPFIBP2Q8ND30 876 aa15.87■□□□□ 0.13
CUX1-214ENST00000550008 CCHCR1Q8TD31 782 aa15.87■□□□□ 0.13
CUX1-214ENST00000550008 ATP8B4Q8TF62 1192 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms