RNA–Protein interactions for RNA: ENST00000549612.5

ATF1-202, Transcript of activating transcription factor 1, humanhuman

TSL 5

Gene ATF1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1-202ENST00000549612 KRT18P05783 430 aaKnown RBP21.31■■□□□ 1
ATF1-202ENST00000549612 CXCL8P10145 99 aa21.31■■□□□ 1
ATF1-202ENST00000549612 MARCKSP29966 332 aaPredicted RBP21.31■■□□□ 1
ATF1-202ENST00000549612 LIG4P49917 911 aa21.31■■□□□ 1
ATF1-202ENST00000549612 PPM1LQ5SGD2 360 aa21.31■■□□□ 1
ATF1-202ENST00000549612 RTL10Q7L3V2 364 aa21.31■■□□□ 1
ATF1-202ENST00000549612 PRSS33Q8NF86 280 aa21.31■■□□□ 1
ATF1-202ENST00000549612 STK17AQ9UEE5 414 aa21.31■■□□□ 1
ATF1-202ENST00000549612 DUSP12Q9UNI6 340 aa21.31■■□□□ 1
ATF1-202ENST00000549612 MTMR6Q9Y217 621 aa21.31■■□□□ 1
ATF1-202ENST00000549612 TTC26A0AVF1 554 aa21.3■■□□□ 1
ATF1-202ENST00000549612 FAM189A1O60320 539 aa21.3■■□□□ 1
ATF1-202ENST00000549612 AVPR2P30518 371 aa21.3■■□□□ 1
ATF1-202ENST00000549612 ABCD1P33897 745 aa21.3■■□□□ 1
ATF1-202ENST00000549612 MATR3P43243 847 aaKnown RBP eCLIP21.3■■□□□ 19e-6■■□□□ 12
ATF1-202ENST00000549612 KYAT1Q16773 422 aa21.3■■□□□ 1
ATF1-202ENST00000549612 UVSSAQ2YD98 709 aa21.3■■□□□ 1
ATF1-202ENST00000549612 SPECC1Q5M775 1068 aa21.3■■□□□ 1
ATF1-202ENST00000549612 AXDND1Q5T1B0 1012 aaPredicted RBP21.3■■□□□ 1
ATF1-202ENST00000549612 SLC8B1Q6J4K2 584 aa21.3■■□□□ 1
ATF1-202ENST00000549612 FAM173BQ6P4H8 233 aa21.3■■□□□ 1
ATF1-202ENST00000549612 SLC7A14Q8TBB6 771 aa21.3■■□□□ 1
ATF1-202ENST00000549612 NXPE3Q969Y0 559 aa21.3■■□□□ 1
ATF1-202ENST00000549612 TUBGCP4Q9UGJ1 667 aa21.3■■□□□ 1
ATF1-202ENST00000549612 NUB1Q9Y5A7 615 aa21.3■■□□□ 1
ATF1-202ENST00000549612 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.3■■□□□ 1
ATF1-202ENST00000549612 DOCK8Q8NF50 2099 aa21.3■■□□□ 1
ATF1-202ENST00000549612 CACNA1HO95180 2353 aa21.3■■□□□ 1
ATF1-202ENST00000549612 TBC1D4O60343 1298 aa21.29■■□□□ 1
ATF1-202ENST00000549612 XYLBO75191 536 aa21.29■■□□□ 1
ATF1-202ENST00000549612 GTF2BQ00403 316 aa21.29■■□□□ 1
ATF1-202ENST00000549612 VARS2Q5ST30 1063 aaKnown RBP21.29■■□□□ 1
ATF1-202ENST00000549612 GET4Q7L5D6 327 aaPredicted RBP21.29■■□□□ 1
ATF1-202ENST00000549612 MAP4K3Q8IVH8 894 aa21.29■■□□□ 1
ATF1-202ENST00000549612 SUSD3Q96L08 255 aa21.29■■□□□ 1
ATF1-202ENST00000549612 ST6GALNAC4Q9H4F1 302 aa21.29■■□□□ 1
ATF1-202ENST00000549612 CCDC39Q9UFE4 941 aa21.29■■□□□ 1
ATF1-202ENST00000549612 ZFP37Q9Y6Q3 630 aaPredicted RBP21.29■■□□□ 1
ATF1-202ENST00000549612 A0A0B4J269 797 aa21.28■■□□□ 1
ATF1-202ENST00000549612 OGTO15294 1046 aa21.28■■□□□ 1
ATF1-202ENST00000549612 CCL16O15467 120 aa21.28■■□□□ 1
ATF1-202ENST00000549612 ADRB2P07550 413 aa21.28■■□□□ 1
ATF1-202ENST00000549612 LAMP2P13473 410 aa21.28■■□□□ 1
ATF1-202ENST00000549612 FSHRP23945 695 aa21.28■■□□□ 1
ATF1-202ENST00000549612 LRPAP1P30533 357 aa21.28■■□□□ 1
ATF1-202ENST00000549612 TNFSF9P41273 254 aa21.28■■□□□ 1
ATF1-202ENST00000549612 NUBP1P53384 320 aa21.28■■□□□ 1
ATF1-202ENST00000549612 PTPN5P54829 565 aa21.28■■□□□ 1
ATF1-202ENST00000549612 MRPL58Q14197 206 aaKnown RBP21.28■■□□□ 1
ATF1-202ENST00000549612 ZBTB6Q15916 424 aa21.28■■□□□ 1
ATF1-202ENST00000549612 GRASPQ7Z6J2 395 aaPredicted RBP21.28■■□□□ 1
ATF1-202ENST00000549612 CLIC6Q96NY7 704 aa21.28■■□□□ 1
ATF1-202ENST00000549612 ZHX3Q9H4I2 956 aa21.28■■□□□ 1
ATF1-202ENST00000549612 ZSCAN16Q9H4T2 348 aaPredicted RBP21.28■■□□□ 1
ATF1-202ENST00000549612 PDCD11Q14690 1871 aaKnown RBP21.28■■□□□ 1
ATF1-202ENST00000549612 ANHXE9PGG2 379 aa21.27■■□□□ 1
ATF1-202ENST00000549612 STX6O43752 255 aa21.27■■□□□ 1
ATF1-202ENST00000549612 CYP3A5P20815 502 aa21.27■■□□□ 1
ATF1-202ENST00000549612 NMT1P30419 496 aaKnown RBP21.27■■□□□ 1
ATF1-202ENST00000549612 MCM4P33991 863 aa21.27■■□□□ 1
ATF1-202ENST00000549612 ROR1Q01973 937 aa21.27■■□□□ 1
ATF1-202ENST00000549612 PPP2R3AQ06190 1150 aa21.27■■□□□ 1
ATF1-202ENST00000549612 SLC39A14Q15043 492 aa21.27■■□□□ 1
ATF1-202ENST00000549612 ENOX2Q16206 610 aaKnown RBP21.27■■□□□ 1
ATF1-202ENST00000549612 ZBTB41Q5SVQ8 909 aa21.27■■□□□ 1
ATF1-202ENST00000549612 SLC39A4Q6P5W5 647 aa21.27■■□□□ 1
ATF1-202ENST00000549612 KRI1Q8N9T8 703 aaKnown RBP21.27■■□□□ 1
ATF1-202ENST00000549612 ZNF461Q8TAF7 563 aa21.27■■□□□ 1
ATF1-202ENST00000549612 RSAD2Q8WXG1 361 aa21.27■■□□□ 1
ATF1-202ENST00000549612 KIF12Q96FN5 646 aa21.27■■□□□ 1
ATF1-202ENST00000549612 USP28Q96RU2 1077 aa21.27■■□□□ 1
ATF1-202ENST00000549612 TSPAN18Q96SJ8 248 aa21.27■■□□□ 1
ATF1-202ENST00000549612 FOXD4L1Q9NU39 408 aa21.27■■□□□ 1
ATF1-202ENST00000549612 LACTBL1A8MY62 500 aa21.26■□□□□ 0.99
ATF1-202ENST00000549612 H7C4K7 107 aa21.26■□□□□ 0.99
ATF1-202ENST00000549612 ABLIM3O94929 683 aa21.26■□□□□ 0.99
ATF1-202ENST00000549612 TXLNAP40222 546 aa21.26■□□□□ 0.99
ATF1-202ENST00000549612 NTHL1P78549 312 aa21.26■□□□□ 0.99
ATF1-202ENST00000549612 CEBPZQ03701 1054 aaKnown RBP21.26■□□□□ 0.99
ATF1-202ENST00000549612 TCF15Q12870 199 aa21.26■□□□□ 0.99
ATF1-202ENST00000549612 HTR4Q13639 388 aa21.26■□□□□ 0.99
ATF1-202ENST00000549612 SLC44A3Q8N4M1 653 aa21.26■□□□□ 0.99
ATF1-202ENST00000549612 MSTO1Q9BUK6 570 aa21.26■□□□□ 0.99
ATF1-202ENST00000549612 FBXL5Q9UKA1 691 aa21.26■□□□□ 0.99
ATF1-202ENST00000549612 UBQLN1Q9UMX0 589 aaKnown RBP21.26■□□□□ 0.99
ATF1-202ENST00000549612 WDR27A2RRH5 827 aa21.25■□□□□ 0.99
ATF1-202ENST00000549612 NARSO43776 548 aaKnown RBP21.25■□□□□ 0.99
ATF1-202ENST00000549612 SPAG1Q07617 926 aa21.25■□□□□ 0.99
ATF1-202ENST00000549612 RRAGBQ5VZM2 374 aa21.25■□□□□ 0.99
ATF1-202ENST00000549612 ASTLQ6HA08 431 aaPredicted RBP21.25■□□□□ 0.99
ATF1-202ENST00000549612 TMEM105Q8N8V8 129 aa21.25■□□□□ 0.99
ATF1-202ENST00000549612 APPL2Q8NEU8 664 aa21.25■□□□□ 0.99
ATF1-202ENST00000549612 DDX12PQ92771 950 aa21.25■□□□□ 0.99
ATF1-202ENST00000549612 SNX21Q969T3 373 aa21.25■□□□□ 0.99
ATF1-202ENST00000549612 MFSD1Q9H3U5 465 aa21.25■□□□□ 0.99
ATF1-202ENST00000549612 RPF1Q9H9Y2 349 aaKnown RBP21.25■□□□□ 0.99
ATF1-202ENST00000549612 CPSF3Q9UKF6 684 aaKnown RBP21.25■□□□□ 0.99
ATF1-202ENST00000549612 CDH7Q9ULB5 785 aa21.25■□□□□ 0.99
ATF1-202ENST00000549612 PCDHB8Q9UN66 801 aa21.25■□□□□ 0.99
ATF1-202ENST00000549612 POLIQ9UNA4 740 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms