RNA–Protein interactions for RNA: ENST00000549499.1

FGD6-205, Transcript of FYVE, RhoGEF and PH domain containing 6, humanhuman

TSL 1 (best) BASIC

Gene FGD6, Length 3,757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD6-205ENST00000549499 GTF3C4Q9UKN8 822 aa7.74□□□□□ -1.17
FGD6-205ENST00000549499 SIT1Q9Y3P8 196 aa7.74□□□□□ -1.17
FGD6-205ENST00000549499 NFASCO94856 1347 aa7.74□□□□□ -1.17
FGD6-205ENST00000549499 GOLGA8CPA6NN73 597 aa7.73□□□□□ -1.17
FGD6-205ENST00000549499 DHX58Q96C10 678 aa7.73□□□□□ -1.17
FGD6-205ENST00000549499 RIPOR3Q96MK2 946 aa7.73□□□□□ -1.17
FGD6-205ENST00000549499 TTPALQ9BTX7 342 aa7.73□□□□□ -1.17
FGD6-205ENST00000549499 NCDNQ9UBB6 729 aa7.73□□□□□ -1.17
FGD6-205ENST00000549499 SORCS3Q9UPU3 1222 aa7.73□□□□□ -1.17
FGD6-205ENST00000549499 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.73□□□□□ -1.17
FGD6-205ENST00000549499 LAMB1P07942 1786 aa7.73□□□□□ -1.17
FGD6-205ENST00000549499 A0A0G2JMZ2 1700 aa7.73□□□□□ -1.17
FGD6-205ENST00000549499 IGKV6D-21A0A0A0MT36 114 aa7.73□□□□□ -1.17
FGD6-205ENST00000549499 SMIM28A0A1B0GU29 152 aa7.73□□□□□ -1.17
FGD6-205ENST00000549499 AXIN1O15169 862 aa7.73□□□□□ -1.17
FGD6-205ENST00000549499 GCNT3O95395 438 aa7.73□□□□□ -1.17
FGD6-205ENST00000549499 SLC26A2P50443 739 aa7.73□□□□□ -1.17
FGD6-205ENST00000549499 GOLGA8FQ08AF8 430 aa7.73□□□□□ -1.17
FGD6-205ENST00000549499 GOLGA8DPQ0D2H9 430 aa7.73□□□□□ -1.17
FGD6-205ENST00000549499 COL9A2Q14055 689 aaPredicted RBP7.73□□□□□ -1.17
FGD6-205ENST00000549499 TARBP2Q15633 366 aaKnown RBP7.73□□□□□ -1.17
FGD6-205ENST00000549499 USP41Q3LFD5 358 aa7.73□□□□□ -1.17
FGD6-205ENST00000549499 TXNDC8Q6A555 127 aa7.73□□□□□ -1.17
FGD6-205ENST00000549499 POTEHQ6S545 545 aa7.73□□□□□ -1.17
FGD6-205ENST00000549499 SP7Q8TDD2 431 aaPredicted RBP7.73□□□□□ -1.17
FGD6-205ENST00000549499 POMGNT1Q8WZA1 660 aa7.73□□□□□ -1.17
FGD6-205ENST00000549499 NKD2Q969F2 451 aaPredicted RBP7.73□□□□□ -1.17
FGD6-205ENST00000549499 CRISPLD1Q9H336 500 aa7.73□□□□□ -1.17
FGD6-205ENST00000549499 DHX33Q9H6R0 707 aaKnown RBP7.73□□□□□ -1.17
FGD6-205ENST00000549499 RC3H2Q9HBD1 1191 aaKnown RBP7.73□□□□□ -1.17
FGD6-205ENST00000549499 TRIP11Q15643 1979 aa7.73□□□□□ -1.17
FGD6-205ENST00000549499 TRIM24O15164 1050 aa7.73□□□□□ -1.17
FGD6-205ENST00000549499 SEC24AO95486 1093 aa7.73□□□□□ -1.17
FGD6-205ENST00000549499 CTSAP10619 480 aa7.73□□□□□ -1.17
FGD6-205ENST00000549499 CEBPBP17676 345 aa7.73□□□□□ -1.17
FGD6-205ENST00000549499 STRN3Q13033 797 aa7.73□□□□□ -1.17
FGD6-205ENST00000549499 TFDP1Q14186 410 aa7.73□□□□□ -1.17
FGD6-205ENST00000549499 HSP90AA2PQ14568 343 aaPredicted RBP7.73□□□□□ -1.17
FGD6-205ENST00000549499 DSC3Q14574 896 aa7.73□□□□□ -1.17
FGD6-205ENST00000549499 TEAD2Q15562 447 aa7.73□□□□□ -1.17
FGD6-205ENST00000549499 SLC39A12Q504Y0 691 aa7.73□□□□□ -1.17
FGD6-205ENST00000549499 HERC4Q5GLZ8 1057 aaPredicted RBP7.73□□□□□ -1.17
FGD6-205ENST00000549499 SLC27A1Q6PCB7 646 aa7.73□□□□□ -1.17
FGD6-205ENST00000549499 ZNF598Q86UK7 904 aaKnown RBP7.73□□□□□ -1.17
FGD6-205ENST00000549499 FBXO18Q8NFZ0 1043 aa7.73□□□□□ -1.17
FGD6-205ENST00000549499 OR2I1PQ8NGU4 316 aa7.73□□□□□ -1.17
FGD6-205ENST00000549499 CHORDC1Q9UHD1 332 aaPredicted RBP7.73□□□□□ -1.17
FGD6-205ENST00000549499 GREB1LQ9C091 1923 aaPredicted RBP7.73□□□□□ -1.17
FGD6-205ENST00000549499 PRR23AA6NEV1 266 aa7.72□□□□□ -1.17
FGD6-205ENST00000549499 RHOP08100 348 aa7.72□□□□□ -1.17
FGD6-205ENST00000549499 HMBSP08397 361 aa7.72□□□□□ -1.17
FGD6-205ENST00000549499 SRGAP2BP0DMP2 458 aa7.72□□□□□ -1.17
FGD6-205ENST00000549499 FSHRP23945 695 aa7.72□□□□□ -1.17
FGD6-205ENST00000549499 HOXC8P31273 242 aa7.72□□□□□ -1.17
FGD6-205ENST00000549499 PPM1AP35813 382 aa7.72□□□□□ -1.17
FGD6-205ENST00000549499 DMWDQ09019 674 aa7.72□□□□□ -1.17
FGD6-205ENST00000549499 TDGQ13569 410 aa7.72□□□□□ -1.17
FGD6-205ENST00000549499 PTPN21Q16825 1174 aa7.72□□□□□ -1.17
FGD6-205ENST00000549499 RNF19BQ6ZMZ0 732 aa7.72□□□□□ -1.17
FGD6-205ENST00000549499 SFTPA1Q8IWL2 248 aa7.72□□□□□ -1.17
FGD6-205ENST00000549499 HSD17B14Q9BPX1 270 aa7.72□□□□□ -1.17
FGD6-205ENST00000549499 COLEC11Q9BWP8 271 aa7.72□□□□□ -1.17
FGD6-205ENST00000549499 PDZD7Q9H5P4 517 aa7.72□□□□□ -1.17
FGD6-205ENST00000549499 C1orf112Q9NSG2 853 aa7.72□□□□□ -1.17
FGD6-205ENST00000549499 MAP1AP78559 2803 aaPredicted RBP7.72□□□□□ -1.17
FGD6-205ENST00000549499 FAM47DPA6NHR8 397 aa7.72□□□□□ -1.17
FGD6-205ENST00000549499 DPYSL4O14531 572 aa7.72□□□□□ -1.17
FGD6-205ENST00000549499 DGAT1O75907 488 aa7.72□□□□□ -1.17
FGD6-205ENST00000549499 CALCAP01258 141 aa7.72□□□□□ -1.17
FGD6-205ENST00000549499 NKX3-2P78367 333 aa7.72□□□□□ -1.17
FGD6-205ENST00000549499 TEX2Q8IWB9 1127 aa7.72□□□□□ -1.17
FGD6-205ENST00000549499 FAM160A2Q8N612 972 aaPredicted RBP7.72□□□□□ -1.17
FGD6-205ENST00000549499 CRYGNQ8WXF5 182 aa7.72□□□□□ -1.17
FGD6-205ENST00000549499 KCNMB3Q9NPA1 279 aa7.72□□□□□ -1.17
FGD6-205ENST00000549499 DNMT3BQ9UBC3 853 aaKnown RBP7.72□□□□□ -1.17
FGD6-205ENST00000549499 MED19A0JLT2 244 aaPredicted RBP7.72□□□□□ -1.17
FGD6-205ENST00000549499 NFICP08651 508 aa7.72□□□□□ -1.17
FGD6-205ENST00000549499 GABRR2P28476 465 aa7.72□□□□□ -1.17
FGD6-205ENST00000549499 CIITAP33076 1130 aa7.72□□□□□ -1.17
FGD6-205ENST00000549499 TRAPPC10P48553 1259 aa7.72□□□□□ -1.17
FGD6-205ENST00000549499 CYP27A1Q02318 531 aa7.72□□□□□ -1.17
FGD6-205ENST00000549499 SPIRE1Q08AE8 756 aa7.72□□□□□ -1.17
FGD6-205ENST00000549499 SIGLEC14Q08ET2 396 aa7.72□□□□□ -1.17
FGD6-205ENST00000549499 FAM26DQ5JW98 314 aa7.72□□□□□ -1.17
FGD6-205ENST00000549499 VARS2Q5ST30 1063 aaKnown RBP7.72□□□□□ -1.17
FGD6-205ENST00000549499 NT5DC1Q5TFE4 455 aa7.72□□□□□ -1.17
FGD6-205ENST00000549499 PKN3Q6P5Z2 889 aa7.72□□□□□ -1.17
FGD6-205ENST00000549499 MARCH9Q86YJ5 346 aa7.72□□□□□ -1.17
FGD6-205ENST00000549499 COLGALT2Q8IYK4 626 aa7.72□□□□□ -1.17
FGD6-205ENST00000549499 LRRC15Q8TF66 581 aa7.72□□□□□ -1.17
FGD6-205ENST00000549499 ATRIPQ8WXE1 791 aa7.72□□□□□ -1.17
FGD6-205ENST00000549499 CASP10Q92851 521 aa7.72□□□□□ -1.17
FGD6-205ENST00000549499 ACAP3Q96P50 834 aa7.72□□□□□ -1.17
FGD6-205ENST00000549499 ZBP1Q9H171 429 aa7.72□□□□□ -1.17
FGD6-205ENST00000549499 CDT1Q9H211 546 aa7.72□□□□□ -1.17
FGD6-205ENST00000549499 MRPL44Q9H9J2 332 aaKnown RBP7.72□□□□□ -1.17
FGD6-205ENST00000549499 PDE11AQ9HCR9 933 aa7.72□□□□□ -1.17
FGD6-205ENST00000549499 NOL7Q9UMY1 257 aaKnown RBP7.72□□□□□ -1.17
FGD6-205ENST00000549499 SNX9Q9Y5X1 595 aa7.72□□□□□ -1.17
FGD6-205ENST00000549499 ANKRD63C9JTQ0 380 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms