RNA–Protein interactions for RNA: ENST00000549417.5

LIN7A-202, Transcript of lin-7 homolog A, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene LIN7A, Length 905 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7A-202ENST00000549417 DGKEP52429 567 aa7.57□□□□□ -1.2
LIN7A-202ENST00000549417 ARPP19P56211 112 aa7.57□□□□□ -1.2
LIN7A-202ENST00000549417 ANTXR2P58335 489 aa7.57□□□□□ -1.2
LIN7A-202ENST00000549417 TRIM61Q5EBN2 209 aa7.57□□□□□ -1.2
LIN7A-202ENST00000549417 CYP4A22Q5TCH4 519 aa7.57□□□□□ -1.2
LIN7A-202ENST00000549417 PMS2CLQ68D20 193 aa7.57□□□□□ -1.2
LIN7A-202ENST00000549417 PLA2G4FQ68DD2 849 aa7.57□□□□□ -1.2
LIN7A-202ENST00000549417 NFXL1Q6ZNB6 911 aa7.57□□□□□ -1.2
LIN7A-202ENST00000549417 ARMCX6Q7L4S7 300 aa7.57□□□□□ -1.2
LIN7A-202ENST00000549417 RALYLQ86SE5 291 aaKnown RBP7.57□□□□□ -1.2
LIN7A-202ENST00000549417 CDR2LQ86X02 465 aaPredicted RBP7.57□□□□□ -1.2
LIN7A-202ENST00000549417 MARCH9Q86YJ5 346 aa7.57□□□□□ -1.2
LIN7A-202ENST00000549417 SYNPOQ8N3V7 929 aa7.57□□□□□ -1.2
LIN7A-202ENST00000549417 PIP4K2CQ8TBX8 421 aa7.57□□□□□ -1.2
LIN7A-202ENST00000549417 TMEM143Q96AN5 459 aa7.57□□□□□ -1.2
LIN7A-202ENST00000549417 MSANTD3Q96H12 275 aa7.57□□□□□ -1.2
LIN7A-202ENST00000549417 CAMK1GQ96NX5 476 aa7.57□□□□□ -1.2
LIN7A-202ENST00000549417 LRRC3BQ96PB8 259 aa7.57□□□□□ -1.2
LIN7A-202ENST00000549417 LZTS2Q9BRK4 669 aa7.57□□□□□ -1.2
LIN7A-202ENST00000549417 TPSD1Q9BZJ3 242 aa7.57□□□□□ -1.2
LIN7A-202ENST00000549417 AVENQ9NQS1 362 aaPredicted RBP7.57□□□□□ -1.2
LIN7A-202ENST00000549417 DIAPH3Q9NSV4 1193 aa7.57□□□□□ -1.2
LIN7A-202ENST00000549417 PARP2Q9UGN5 583 aa7.57□□□□□ -1.2
LIN7A-202ENST00000549417 COL4A3BPQ9Y5P4 624 aa7.57□□□□□ -1.2
LIN7A-202ENST00000549417 ATXN2Q99700 1313 aaKnown RBP7.56□□□□□ -1.2
LIN7A-202ENST00000549417 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.56□□□□□ -1.2
LIN7A-202ENST00000549417 I3L4J1 428 aa7.56□□□□□ -1.2
LIN7A-202ENST00000549417 ADAMTS3O15072 1205 aa7.56□□□□□ -1.2
LIN7A-202ENST00000549417 ATXN7O15265 892 aaPredicted RBP7.56□□□□□ -1.2
LIN7A-202ENST00000549417 RNF40O75150 1001 aa7.56□□□□□ -1.2
LIN7A-202ENST00000549417 MAFO75444 373 aaPredicted RBP7.56□□□□□ -1.2
LIN7A-202ENST00000549417 DDAH1O94760 285 aa7.56□□□□□ -1.2
LIN7A-202ENST00000549417 ERLIN2O94905 339 aa7.56□□□□□ -1.2
LIN7A-202ENST00000549417 SEC24AO95486 1093 aa7.56□□□□□ -1.2
LIN7A-202ENST00000549417 EGFP01133 1207 aa7.56□□□□□ -1.2
LIN7A-202ENST00000549417 PRKCBP05771 671 aa7.56□□□□□ -1.2
LIN7A-202ENST00000549417 ENGP17813 658 aa7.56□□□□□ -1.2
LIN7A-202ENST00000549417 U2AF2P26368 475 aaKnown RBP eCLIP7.56□□□□□ -1.2
LIN7A-202ENST00000549417 SMARCA1P28370 1054 aa7.56□□□□□ -1.2
LIN7A-202ENST00000549417 ELF1P32519 619 aa7.56□□□□□ -1.2
LIN7A-202ENST00000549417 MLLT6P55198 1093 aaPredicted RBP7.56□□□□□ -1.2
LIN7A-202ENST00000549417 GRIK3Q13003 919 aa7.56□□□□□ -1.2
LIN7A-202ENST00000549417 SEMA3BQ13214 749 aa7.56□□□□□ -1.2
LIN7A-202ENST00000549417 KARSQ15046 597 aaKnown RBP7.56□□□□□ -1.2
LIN7A-202ENST00000549417 ZNF423Q2M1K9 1284 aa7.56□□□□□ -1.2
LIN7A-202ENST00000549417 STXBP5Q5T5C0 1151 aa7.56□□□□□ -1.2
LIN7A-202ENST00000549417 FSTL4Q6MZW2 842 aa7.56□□□□□ -1.2
LIN7A-202ENST00000549417 NOTUMQ6P988 496 aa7.56□□□□□ -1.2
LIN7A-202ENST00000549417 C1orf228Q6PIY5 440 aa7.56□□□□□ -1.2
LIN7A-202ENST00000549417 CCNI2Q6ZMN8 369 aaPredicted RBP7.56□□□□□ -1.2
LIN7A-202ENST00000549417 CNNM3Q8NE01 707 aa7.56□□□□□ -1.2
LIN7A-202ENST00000549417 OR2I1PQ8NGU4 316 aa7.56□□□□□ -1.2
LIN7A-202ENST00000549417 IGDCC4Q8TDY8 1250 aa7.56□□□□□ -1.2
LIN7A-202ENST00000549417 PRPF31Q8WWY3 499 aaKnown RBP7.56□□□□□ -1.2
LIN7A-202ENST00000549417 GTPBP2Q9BX10 602 aaKnown RBP7.56□□□□□ -1.2
LIN7A-202ENST00000549417 NUSAP1Q9BXS6 441 aaKnown RBP7.56□□□□□ -1.2
LIN7A-202ENST00000549417 NIFKQ9BYG3 293 aaKnown RBP7.56□□□□□ -1.2
LIN7A-202ENST00000549417 TRIM6Q9C030 488 aaPredicted RBP7.56□□□□□ -1.2
LIN7A-202ENST00000549417 IL25Q9H293 177 aa7.56□□□□□ -1.2
LIN7A-202ENST00000549417 CXCL16Q9H2A7 254 aa7.56□□□□□ -1.2
LIN7A-202ENST00000549417 UNC45AQ9H3U1 944 aa7.56□□□□□ -1.2
LIN7A-202ENST00000549417 CYP4F11Q9HBI6 524 aa7.56□□□□□ -1.2
LIN7A-202ENST00000549417 IGSF5Q9NSI5 407 aa7.56□□□□□ -1.2
LIN7A-202ENST00000549417 MTRRQ9UBK8 725 aa7.56□□□□□ -1.2
LIN7A-202ENST00000549417 GIT1Q9Y2X7 761 aa7.56□□□□□ -1.2
LIN7A-202ENST00000549417 PI4KAP42356 2102 aa7.55□□□□□ -1.2
LIN7A-202ENST00000549417 PTPRBP23467 1997 aa7.55□□□□□ -1.2
LIN7A-202ENST00000549417 ARHGEF37A1IGU5 675 aa7.55□□□□□ -1.2
LIN7A-202ENST00000549417 SMCO2A6NFE2 343 aa7.55□□□□□ -1.2
LIN7A-202ENST00000549417 E7EWF7 191 aa7.55□□□□□ -1.2
LIN7A-202ENST00000549417 TSPAN1O60635 241 aa7.55□□□□□ -1.2
LIN7A-202ENST00000549417 ATG13O75143 517 aa7.55□□□□□ -1.2
LIN7A-202ENST00000549417 STBD1O95210 358 aa7.55□□□□□ -1.2
LIN7A-202ENST00000549417 NPTXRO95502 500 aa7.55□□□□□ -1.2
LIN7A-202ENST00000549417 TKTP29401 623 aaKnown RBP7.55□□□□□ -1.2
LIN7A-202ENST00000549417 CLK2P49760 499 aaKnown RBP7.55□□□□□ -1.2
LIN7A-202ENST00000549417 GNAQP50148 359 aa7.55□□□□□ -1.2
LIN7A-202ENST00000549417 HNRNPUQ00839 825 aaKnown RBP eCLIP7.55□□□□□ -1.2
LIN7A-202ENST00000549417 SETQ01105 290 aaPredicted RBP7.55□□□□□ -1.2
LIN7A-202ENST00000549417 FCHO2Q0JRZ9 810 aa7.55□□□□□ -1.2
LIN7A-202ENST00000549417 LAMTOR4Q0VGL1 99 aa7.55□□□□□ -1.2
LIN7A-202ENST00000549417 LMAN2Q12907 356 aa7.55□□□□□ -1.2
LIN7A-202ENST00000549417 TUSC3Q13454 348 aa7.55□□□□□ -1.2
LIN7A-202ENST00000549417 SRGAP1Q7Z6B7 1085 aa7.55□□□□□ -1.2
LIN7A-202ENST00000549417 HDDC3Q8N4P3 179 aa7.55□□□□□ -1.2
LIN7A-202ENST00000549417 CAMKK1Q8N5S9 505 aa7.55□□□□□ -1.2
LIN7A-202ENST00000549417 RNF149Q8NC42 400 aa7.55□□□□□ -1.2
LIN7A-202ENST00000549417 RPLP0P6Q8NHW5 317 aa7.55□□□□□ -1.2
LIN7A-202ENST00000549417 SHKBP1Q8TBC3 707 aa7.55□□□□□ -1.2
LIN7A-202ENST00000549417 RNF25Q96BH1 459 aaPredicted RBP7.55□□□□□ -1.2
LIN7A-202ENST00000549417 TMEM209Q96SK2 561 aa7.55□□□□□ -1.2
LIN7A-202ENST00000549417 MAP3K14Q99558 947 aa7.55□□□□□ -1.2
LIN7A-202ENST00000549417 CSRNP2Q9H175 543 aa7.55□□□□□ -1.2
LIN7A-202ENST00000549417 CLMPQ9H6B4 373 aa7.55□□□□□ -1.2
LIN7A-202ENST00000549417 TRPV4Q9HBA0 871 aa7.55□□□□□ -1.2
LIN7A-202ENST00000549417 TMEM74BQ9NUR3 256 aa7.55□□□□□ -1.2
LIN7A-202ENST00000549417 MGAQ8IWI9 3026 aa7.55□□□□□ -1.2
LIN7A-202ENST00000549417 GON4LQ3T8J9 2241 aa7.55□□□□□ -1.2
LIN7A-202ENST00000549417 USP9XQ93008 2570 aaPredicted RBP7.55□□□□□ -1.2
LIN7A-202ENST00000549417 A0A1W2PRU2 124 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms