RNA–Protein interactions for RNA: ENST00000549049.5

SLC38A1-206, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 3,196 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-206ENST00000549049 DCLK3Q9C098 648 aa13.17□□□□□ -0.3
SLC38A1-206ENST00000549049 ADAM22Q9P0K1 906 aa13.17□□□□□ -0.3
SLC38A1-206ENST00000549049 GABBR1Q9UBS5 961 aa13.17□□□□□ -0.3
SLC38A1-206ENST00000549049 PCDHB4Q9Y5E5 795 aa13.17□□□□□ -0.3
SLC38A1-206ENST00000549049 ASTN2O75129 1339 aaPredicted RBP13.17□□□□□ -0.3
SLC38A1-206ENST00000549049 AFF2P51816 1311 aa13.17□□□□□ -0.3
SLC38A1-206ENST00000549049 DHX15O43143 795 aaKnown RBP13.17□□□□□ -0.3
SLC38A1-206ENST00000549049 CCNE2O96020 404 aa13.17□□□□□ -0.3
SLC38A1-206ENST00000549049 TARSP26639 723 aaKnown RBP13.17□□□□□ -0.3
SLC38A1-206ENST00000549049 TRMT10CQ7L0Y3 403 aaKnown RBP13.17□□□□□ -0.3
SLC38A1-206ENST00000549049 RMDN3Q96TC7 470 aa13.17□□□□□ -0.3
SLC38A1-206ENST00000549049 SERPINA10Q9UK55 444 aa13.17□□□□□ -0.3
SLC38A1-206ENST00000549049 SLC12A4Q9UP95 1085 aa13.17□□□□□ -0.3
SLC38A1-206ENST00000549049 NEBLO76041 1014 aa13.16□□□□□ -0.3
SLC38A1-206ENST00000549049 WNT7BP56706 349 aa13.16□□□□□ -0.3
SLC38A1-206ENST00000549049 COPS2P61201 443 aa13.16□□□□□ -0.3
SLC38A1-206ENST00000549049 MTERF2Q49AM1 385 aa13.16□□□□□ -0.3
SLC38A1-206ENST00000549049 SWSAP1Q6NVH7 229 aa13.16□□□□□ -0.3
SLC38A1-206ENST00000549049 MCOLN2Q8IZK6 566 aa13.16□□□□□ -0.3
SLC38A1-206ENST00000549049 OGFOD1Q8N543 542 aa13.16□□□□□ -0.3
SLC38A1-206ENST00000549049 ERP27Q96DN0 273 aa13.16□□□□□ -0.3
SLC38A1-206ENST00000549049 RIT2Q99578 217 aa13.16□□□□□ -0.3
SLC38A1-206ENST00000549049 OSBPL8Q9BZF1 889 aa13.16□□□□□ -0.3
SLC38A1-206ENST00000549049 LRRC19Q9H756 370 aa13.16□□□□□ -0.3
SLC38A1-206ENST00000549049 AGO4Q9HCK5 861 aaKnown RBP13.16□□□□□ -0.3
SLC38A1-206ENST00000549049 UVRAGQ9P2Y5 699 aa13.16□□□□□ -0.3
SLC38A1-206ENST00000549049 FZD1Q9UP38 647 aa13.16□□□□□ -0.3
SLC38A1-206ENST00000549049 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.16□□□□□ -0.3
SLC38A1-206ENST00000549049 MROH7Q68CQ1 1323 aa13.16□□□□□ -0.3
SLC38A1-206ENST00000549049 FSCN2O14926 492 aa13.16□□□□□ -0.3
SLC38A1-206ENST00000549049 ITIH2P19823 946 aa13.16□□□□□ -0.3
SLC38A1-206ENST00000549049 NFIL3Q16649 462 aa13.16□□□□□ -0.3
SLC38A1-206ENST00000549049 CLEC16AQ2KHT3 1053 aa13.16□□□□□ -0.3
SLC38A1-206ENST00000549049 STRA6Q9BX79 667 aa13.16□□□□□ -0.3
SLC38A1-206ENST00000549049 RANBP17Q9H2T7 1088 aaKnown RBP13.16□□□□□ -0.3
SLC38A1-206ENST00000549049 TMEM8AQ9HCN3 771 aa13.16□□□□□ -0.3
SLC38A1-206ENST00000549049 ZNF70Q9UC06 446 aaPredicted RBP13.16□□□□□ -0.3
SLC38A1-206ENST00000549049 SEPT9Q9UHD8 586 aaPredicted RBP13.16□□□□□ -0.3
SLC38A1-206ENST00000549049 HAO1Q9UJM8 370 aa13.16□□□□□ -0.3
SLC38A1-206ENST00000549049 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.16□□□□□ -0.3
SLC38A1-206ENST00000549049 TLR3O15455 904 aaKnown RBP13.16□□□□□ -0.3
SLC38A1-206ENST00000549049 GGPS1O95749 300 aa13.16□□□□□ -0.3
SLC38A1-206ENST00000549049 MYBL1P10243 752 aa13.16□□□□□ -0.3
SLC38A1-206ENST00000549049 RFX1P22670 979 aa13.16□□□□□ -0.3
SLC38A1-206ENST00000549049 DSG3P32926 999 aa13.16□□□□□ -0.3
SLC38A1-206ENST00000549049 PIK3CAP42336 1068 aa13.16□□□□□ -0.3
SLC38A1-206ENST00000549049 RPL7AP62424 266 aaKnown RBP13.16□□□□□ -0.3
SLC38A1-206ENST00000549049 CLUL1Q15846 466 aa13.16□□□□□ -0.3
SLC38A1-206ENST00000549049 ARHGEF16Q5VV41 709 aa13.16□□□□□ -0.3
SLC38A1-206ENST00000549049 TMEM161BQ8NDZ6 487 aa13.16□□□□□ -0.3
SLC38A1-206ENST00000549049 SUPT20HQ8NEM7 779 aa13.16□□□□□ -0.3
SLC38A1-206ENST00000549049 ATL2Q8NHH9 583 aa13.16□□□□□ -0.3
SLC38A1-206ENST00000549049 TMEM143Q96AN5 459 aa13.16□□□□□ -0.3
SLC38A1-206ENST00000549049 DCTN4Q9UJW0 460 aa13.16□□□□□ -0.3
SLC38A1-206ENST00000549049 ARL2BPQ9Y2Y0 163 aa13.16□□□□□ -0.3
SLC38A1-206ENST00000549049 UBE4BO95155 1302 aa13.15□□□□□ -0.3
SLC38A1-206ENST00000549049 KLRG2A4D1S0 409 aaPredicted RBP13.15□□□□□ -0.3
SLC38A1-206ENST00000549049 CA4P22748 312 aa13.15□□□□□ -0.3
SLC38A1-206ENST00000549049 IVDP26440 423 aa13.15□□□□□ -0.3
SLC38A1-206ENST00000549049 MAGEA4P43358 317 aa13.15□□□□□ -0.3
SLC38A1-206ENST00000549049 GTF2BQ00403 316 aa13.15□□□□□ -0.3
SLC38A1-206ENST00000549049 MGAT5Q09328 741 aa13.15□□□□□ -0.3
SLC38A1-206ENST00000549049 GPS1Q13098 491 aa13.15□□□□□ -0.3
SLC38A1-206ENST00000549049 PKN2Q16513 984 aaKnown RBP13.15□□□□□ -0.3
SLC38A1-206ENST00000549049 BRDTQ58F21 947 aaPredicted RBP13.15□□□□□ -0.3
SLC38A1-206ENST00000549049 WDR44Q5JSH3 913 aa13.15□□□□□ -0.3
SLC38A1-206ENST00000549049 ZBTB41Q5SVQ8 909 aa13.15□□□□□ -0.3
SLC38A1-206ENST00000549049 SLC39A4Q6P5W5 647 aa13.15□□□□□ -0.3
SLC38A1-206ENST00000549049 ANO5Q75V66 913 aa13.15□□□□□ -0.3
SLC38A1-206ENST00000549049 MICAL1Q8TDZ2 1067 aa13.15□□□□□ -0.3
SLC38A1-206ENST00000549049 DDX1Q92499 740 aaKnown RBP13.15□□□□□ -0.3
SLC38A1-206ENST00000549049 RSRC1Q96IZ7 334 aaKnown RBP13.15□□□□□ -0.3
SLC38A1-206ENST00000549049 SERPINB12Q96P63 405 aa13.15□□□□□ -0.3
SLC38A1-206ENST00000549049 CCDC77Q9BR77 488 aa13.15□□□□□ -0.3
SLC38A1-206ENST00000549049 ADGRA3Q8IWK6 1321 aa13.15□□□□□ -0.3
SLC38A1-206ENST00000549049 WNK3Q9BYP7 1800 aa13.15□□□□□ -0.3
SLC38A1-206ENST00000549049 GRIN3BO60391 1043 aa13.15□□□□□ -0.3
SLC38A1-206ENST00000549049 NEFHP12036 1026 aa13.15□□□□□ -0.3
SLC38A1-206ENST00000549049 GBP1P32455 592 aa13.15□□□□□ -0.3
SLC38A1-206ENST00000549049 CAP2P40123 477 aa13.15□□□□□ -0.3
SLC38A1-206ENST00000549049 PEX19P40855 299 aa13.15□□□□□ -0.3
SLC38A1-206ENST00000549049 SESN3P58005 492 aa13.15□□□□□ -0.3
SLC38A1-206ENST00000549049 OVGP1Q12889 678 aa13.15□□□□□ -0.3
SLC38A1-206ENST00000549049 WLSQ5T9L3 541 aa13.15□□□□□ -0.3
SLC38A1-206ENST00000549049 ECHDC2Q86YB7 292 aa13.15□□□□□ -0.3
SLC38A1-206ENST00000549049 ZBED8Q8IZ13 594 aa13.15□□□□□ -0.3
SLC38A1-206ENST00000549049 CKAP2Q8WWK9 683 aa13.15□□□□□ -0.3
SLC38A1-206ENST00000549049 ZNF516Q92618 1163 aa13.15□□□□□ -0.3
SLC38A1-206ENST00000549049 TRAIPQ9BWF2 469 aa13.15□□□□□ -0.3
SLC38A1-206ENST00000549049 ZNF277Q9NRM2 450 aaPredicted RBP13.15□□□□□ -0.3
SLC38A1-206ENST00000549049 KCND2Q9NZV8 630 aa13.15□□□□□ -0.3
SLC38A1-206ENST00000549049 WHRNQ9P202 907 aa13.15□□□□□ -0.3
SLC38A1-206ENST00000549049 DNPEPQ9ULA0 475 aa13.15□□□□□ -0.3
SLC38A1-206ENST00000549049 UMODL1Q5DID0 1318 aa13.15□□□□□ -0.3
SLC38A1-206ENST00000549049 COL24A1Q17RW2 1714 aa13.15□□□□□ -0.3
SLC38A1-206ENST00000549049 ENTPD3O75355 529 aa13.14□□□□□ -0.31
SLC38A1-206ENST00000549049 LIG4P49917 911 aa13.14□□□□□ -0.31
SLC38A1-206ENST00000549049 WDR4P57081 412 aaKnown RBP13.14□□□□□ -0.31
SLC38A1-206ENST00000549049 GAD2Q05329 585 aa13.14□□□□□ -0.31
SLC38A1-206ENST00000549049 CYP1B1Q16678 543 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms