RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 ATP6V1DQ9Y5K8 247 aa17.18■□□□□ 0.34
DDX54-205ENST00000548786 TTC26A0AVF1 554 aa17.17■□□□□ 0.34
DDX54-205ENST00000548786 GLUD1P00367 558 aa17.17■□□□□ 0.34
DDX54-205ENST00000548786 HOXB8P17481 243 aaPredicted RBP17.17■□□□□ 0.34
DDX54-205ENST00000548786 TKTP29401 623 aaKnown RBP17.17■□□□□ 0.34
DDX54-205ENST00000548786 ADSSP30520 456 aa17.17■□□□□ 0.34
DDX54-205ENST00000548786 CUL4BQ13620 913 aa17.17■□□□□ 0.34
DDX54-205ENST00000548786 ZSWIM2Q8NEG5 633 aa17.17■□□□□ 0.34
DDX54-205ENST00000548786 RXFP1Q9HBX9 757 aa17.17■□□□□ 0.34
DDX54-205ENST00000548786 DZANK1Q9NVP4 752 aa17.17■□□□□ 0.34
DDX54-205ENST00000548786 CPSF3Q9UKF6 684 aaKnown RBP17.17■□□□□ 0.34
DDX54-205ENST00000548786 EXOC7Q9UPT5 735 aa17.17■□□□□ 0.34
DDX54-205ENST00000548786 NUB1Q9Y5A7 615 aa17.17■□□□□ 0.34
DDX54-205ENST00000548786 VWA8A3KMH1 1905 aa17.17■□□□□ 0.34
DDX54-205ENST00000548786 TCHHQ07283 1943 aa17.17■□□□□ 0.34
DDX54-205ENST00000548786 GOLGA8IPA6NC78 632 aa17.16■□□□□ 0.34
DDX54-205ENST00000548786 GOLGA8JA6NMD2 632 aa17.16■□□□□ 0.34
DDX54-205ENST00000548786 ADAM12O43184 909 aa17.16■□□□□ 0.34
DDX54-205ENST00000548786 ACTN4O43707 911 aaKnown RBP17.16■□□□□ 0.34
DDX54-205ENST00000548786 NFICP08651 508 aa17.16■□□□□ 0.34
DDX54-205ENST00000548786 ELAVL2Q12926 359 aaKnown RBP17.16■□□□□ 0.34
DDX54-205ENST00000548786 CBX2Q14781 532 aaPredicted RBP17.16■□□□□ 0.34
DDX54-205ENST00000548786 KYAT1Q16773 422 aa17.16■□□□□ 0.34
DDX54-205ENST00000548786 JADE1Q6IE81 842 aa17.16■□□□□ 0.34
DDX54-205ENST00000548786 SLFN12LQ6IEE8 588 aa17.16■□□□□ 0.34
DDX54-205ENST00000548786 CES5AQ6NT32 575 aa17.16■□□□□ 0.34
DDX54-205ENST00000548786 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.16■□□□□ 0.34
DDX54-205ENST00000548786 LNX1Q8TBB1 728 aaPredicted RBP17.16■□□□□ 0.34
DDX54-205ENST00000548786 SUSD6Q92537 303 aa17.16■□□□□ 0.34
DDX54-205ENST00000548786 DDX27Q96GQ7 796 aaKnown RBP17.16■□□□□ 0.34
DDX54-205ENST00000548786 C7orf25Q9BPX7 421 aa17.16■□□□□ 0.34
DDX54-205ENST00000548786 FAM213AQ9BRX8 229 aa17.16■□□□□ 0.34
DDX54-205ENST00000548786 PCIF1Q9H4Z3 704 aa17.16■□□□□ 0.34
DDX54-205ENST00000548786 PLEKHA5Q9HAU0 1116 aa17.16■□□□□ 0.34
DDX54-205ENST00000548786 MAGEF1Q9HAY2 307 aa17.16■□□□□ 0.34
DDX54-205ENST00000548786 PRKAG3Q9UGI9 489 aa17.16■□□□□ 0.34
DDX54-205ENST00000548786 TMEM189-UBE2V1I3L0A0 370 aa17.15■□□□□ 0.34
DDX54-205ENST00000548786 TGM5O43548 720 aa17.15■□□□□ 0.34
DDX54-205ENST00000548786 CMA1P23946 247 aa17.15■□□□□ 0.34
DDX54-205ENST00000548786 MCM4P33991 863 aa17.15■□□□□ 0.34
DDX54-205ENST00000548786 NDUFA8P51970 172 aa17.15■□□□□ 0.34
DDX54-205ENST00000548786 FAM26FQ5R3K3 315 aa17.15■□□□□ 0.34
DDX54-205ENST00000548786 NELFCDQ8IXH7 590 aa17.15■□□□□ 0.34
DDX54-205ENST00000548786 FSIP1Q8NA03 581 aa17.15■□□□□ 0.34
DDX54-205ENST00000548786 PIK3R5Q8WYR1 880 aa17.15■□□□□ 0.34
DDX54-205ENST00000548786 CBWD1Q9BRT8 395 aa17.15■□□□□ 0.34
DDX54-205ENST00000548786 SCAND2PQ9GZW5 306 aaPredicted RBP17.15■□□□□ 0.34
DDX54-205ENST00000548786 ADAM7Q9H2U9 754 aa17.15■□□□□ 0.34
DDX54-205ENST00000548786 POMKQ9H5K3 350 aa17.15■□□□□ 0.34
DDX54-205ENST00000548786 SFXN1Q9H9B4 322 aa17.15■□□□□ 0.34
DDX54-205ENST00000548786 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.15■□□□□ 0.34
DDX54-205ENST00000548786 STYXL1Q9Y6J8 313 aa17.15■□□□□ 0.34
DDX54-205ENST00000548786 PPEF2O14830 753 aa17.14■□□□□ 0.33
DDX54-205ENST00000548786 TRAPPC3O43617 180 aa17.14■□□□□ 0.33
DDX54-205ENST00000548786 RFPL2O75678 378 aa17.14■□□□□ 0.33
DDX54-205ENST00000548786 FGFR3P22607 806 aa17.14■□□□□ 0.33
DDX54-205ENST00000548786 RPL9P32969 192 aaKnown RBP17.14■□□□□ 0.33
DDX54-205ENST00000548786 ITIH3Q06033 890 aa17.14■□□□□ 0.33
DDX54-205ENST00000548786 ALCAMQ13740 583 aa17.14■□□□□ 0.33
DDX54-205ENST00000548786 TMEM132DQ14C87 1099 aa17.14■□□□□ 0.33
DDX54-205ENST00000548786 UNC13DQ70J99 1090 aa17.14■□□□□ 0.33
DDX54-205ENST00000548786 PAGE5Q96GU1 130 aa17.14■□□□□ 0.33
DDX54-205ENST00000548786 FAM84AQ96KN4 292 aa17.14■□□□□ 0.33
DDX54-205ENST00000548786 POP1Q99575 1024 aaKnown RBP17.14■□□□□ 0.33
DDX54-205ENST00000548786 CLSTN3Q9BQT9 956 aa17.14■□□□□ 0.33
DDX54-205ENST00000548786 PHF7Q9BWX1 381 aaPredicted RBP17.14■□□□□ 0.33
DDX54-205ENST00000548786 GOLPH3LQ9H4A5 285 aa17.14■□□□□ 0.33
DDX54-205ENST00000548786 EPHX3Q9H6B9 360 aa17.14■□□□□ 0.33
DDX54-205ENST00000548786 SLC39A2Q9NP94 309 aa17.14■□□□□ 0.33
DDX54-205ENST00000548786 FNIP2Q9P278 1114 aa17.14■□□□□ 0.33
DDX54-205ENST00000548786 UBQLN1Q9UMX0 589 aaKnown RBP17.14■□□□□ 0.33
DDX54-205ENST00000548786 C19orf67A6NJJ6 358 aa17.13■□□□□ 0.33
DDX54-205ENST00000548786 SLFN14P0C7P3 912 aa17.13■□□□□ 0.33
DDX54-205ENST00000548786 OR1D2P34982 312 aa17.13■□□□□ 0.33
DDX54-205ENST00000548786 SYKP43405 635 aa17.13■□□□□ 0.33
DDX54-205ENST00000548786 ARPP19P56211 112 aa17.13■□□□□ 0.33
DDX54-205ENST00000548786 WNT7BP56706 349 aa17.13■□□□□ 0.33
DDX54-205ENST00000548786 CREMQ03060 361 aa17.13■□□□□ 0.33
DDX54-205ENST00000548786 POSTNQ15063 836 aa17.13■□□□□ 0.33
DDX54-205ENST00000548786 ZBTB6Q15916 424 aa17.13■□□□□ 0.33
DDX54-205ENST00000548786 ARMCX5Q6P1M9 558 aa17.13■□□□□ 0.33
DDX54-205ENST00000548786 CRELD2Q6UXH1 353 aaPredicted RBP17.13■□□□□ 0.33
DDX54-205ENST00000548786 RSPO2Q6UXX9 243 aaPredicted RBP17.13■□□□□ 0.33
DDX54-205ENST00000548786 STXBP4Q6ZWJ1 553 aa17.13■□□□□ 0.33
DDX54-205ENST00000548786 PYM1Q9BRP8 204 aaKnown RBP17.13■□□□□ 0.33
DDX54-205ENST00000548786 TMEM206Q9H813 350 aa17.13■□□□□ 0.33
DDX54-205ENST00000548786 HPSEQ9Y251 543 aa17.13■□□□□ 0.33
DDX54-205ENST00000548786 CDY1Q9Y6F8 540 aa17.13■□□□□ 0.33
DDX54-205ENST00000548786 ANK1P16157 1881 aa17.12■□□□□ 0.33
DDX54-205ENST00000548786 CCDC195A0A1B0GUA6 201 aa17.12■□□□□ 0.33
DDX54-205ENST00000548786 PRR29P0C7W0 189 aa17.12■□□□□ 0.33
DDX54-205ENST00000548786 HOXD13P35453 343 aa17.12■□□□□ 0.33
DDX54-205ENST00000548786 NUCB2P80303 420 aa17.12■□□□□ 0.33
DDX54-205ENST00000548786 VARS2Q5ST30 1063 aaKnown RBP17.12■□□□□ 0.33
DDX54-205ENST00000548786 CNNM4Q6P4Q7 775 aa17.12■□□□□ 0.33
DDX54-205ENST00000548786 KREMEN2Q8NCW0 462 aa17.12■□□□□ 0.33
DDX54-205ENST00000548786 BEST2Q8NFU1 509 aa17.12■□□□□ 0.33
DDX54-205ENST00000548786 RIPOR3Q96MK2 946 aa17.12■□□□□ 0.33
DDX54-205ENST00000548786 MTRRQ9UBK8 725 aa17.12■□□□□ 0.33
DDX54-205ENST00000548786 MUTYHQ9UIF7 546 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms