RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 TDRD3Q9H7E2 651 aaKnown RBP10.51□□□□□ -0.73
SMARCD1-205ENST00000548573 UBN1Q9NPG3 1134 aa10.51□□□□□ -0.73
SMARCD1-205ENST00000548573 STARD13Q9Y3M8 1113 aa10.51□□□□□ -0.73
SMARCD1-205ENST00000548573 MROH7Q68CQ1 1323 aa10.51□□□□□ -0.73
SMARCD1-205ENST00000548573 FAM47DPA6NHR8 397 aa10.51□□□□□ -0.73
SMARCD1-205ENST00000548573 PSTPIP1O43586 416 aa10.51□□□□□ -0.73
SMARCD1-205ENST00000548573 TOM1O60784 492 aa10.51□□□□□ -0.73
SMARCD1-205ENST00000548573 CNGA1P29973 690 aa10.51□□□□□ -0.73
SMARCD1-205ENST00000548573 MKRN4PQ13434 485 aaPredicted RBP10.51□□□□□ -0.73
SMARCD1-205ENST00000548573 LLGL1Q15334 1064 aa10.51□□□□□ -0.73
SMARCD1-205ENST00000548573 TRIP13Q15645 432 aaPredicted RBP10.51□□□□□ -0.73
SMARCD1-205ENST00000548573 GRIPAP1Q4V328 841 aa10.51□□□□□ -0.73
SMARCD1-205ENST00000548573 TMEM63BQ5T3F8 832 aa10.51□□□□□ -0.73
SMARCD1-205ENST00000548573 CC2D2BQ6DHV5 1058 aa10.51□□□□□ -0.73
SMARCD1-205ENST00000548573 RGS9BPQ6ZS82 235 aa10.51□□□□□ -0.73
SMARCD1-205ENST00000548573 LDHDQ86WU2 507 aa10.51□□□□□ -0.73
SMARCD1-205ENST00000548573 ECHDC2Q86YB7 292 aa10.51□□□□□ -0.73
SMARCD1-205ENST00000548573 C4orf19Q8IY42 314 aa10.51□□□□□ -0.73
SMARCD1-205ENST00000548573 KIF2BQ8N4N8 673 aa10.51□□□□□ -0.73
SMARCD1-205ENST00000548573 MAML1Q92585 1016 aa10.51□□□□□ -0.73
SMARCD1-205ENST00000548573 CNKSR1Q969H4 720 aa10.51□□□□□ -0.73
SMARCD1-205ENST00000548573 ANKRD27Q96NW4 1050 aa10.51□□□□□ -0.73
SMARCD1-205ENST00000548573 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.51□□□□□ -0.73
SMARCD1-205ENST00000548573 AGO4Q9HCK5 861 aaKnown RBP10.51□□□□□ -0.73
SMARCD1-205ENST00000548573 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.51□□□□□ -0.73
SMARCD1-205ENST00000548573 TXLNGQ9NUQ3 528 aa10.51□□□□□ -0.73
SMARCD1-205ENST00000548573 DNAJC17Q9NVM6 304 aaKnown RBP10.51□□□□□ -0.73
SMARCD1-205ENST00000548573 TBX20Q9UMR3 447 aa10.51□□□□□ -0.73
SMARCD1-205ENST00000548573 FOXO6A8MYZ6 492 aa10.5□□□□□ -0.73
SMARCD1-205ENST00000548573 RASA4BC9J798 803 aa10.5□□□□□ -0.73
SMARCD1-205ENST00000548573 RASA4O43374 803 aa10.5□□□□□ -0.73
SMARCD1-205ENST00000548573 ECE2O60344 883 aa10.5□□□□□ -0.73
SMARCD1-205ENST00000548573 PROSCO94903 275 aa10.5□□□□□ -0.73
SMARCD1-205ENST00000548573 ASMTLO95671 621 aa10.5□□□□□ -0.73
SMARCD1-205ENST00000548573 RALAP11233 206 aa10.5□□□□□ -0.73
SMARCD1-205ENST00000548573 RRM1P23921 792 aa10.5□□□□□ -0.73
SMARCD1-205ENST00000548573 PSEN1P49768 467 aa10.5□□□□□ -0.73
SMARCD1-205ENST00000548573 YARSP54577 528 aaKnown RBP10.5□□□□□ -0.73
SMARCD1-205ENST00000548573 AOC3Q16853 763 aa10.5□□□□□ -0.73
SMARCD1-205ENST00000548573 PARP6Q2NL67 630 aa10.5□□□□□ -0.73
SMARCD1-205ENST00000548573 IZUMO3Q5VZ72 239 aa10.5□□□□□ -0.73
SMARCD1-205ENST00000548573 TDRPQ86YL5 185 aa10.5□□□□□ -0.73
SMARCD1-205ENST00000548573 RHOT1Q8IXI2 618 aa10.5□□□□□ -0.73
SMARCD1-205ENST00000548573 ZCCHC9Q8N567 271 aaKnown RBP10.5□□□□□ -0.73
SMARCD1-205ENST00000548573 ANKLE1Q8NAG6 615 aa10.5□□□□□ -0.73
SMARCD1-205ENST00000548573 DHX38Q92620 1227 aaKnown RBP10.5□□□□□ -0.73
SMARCD1-205ENST00000548573 PRCCQ92733 491 aaPredicted RBP10.5□□□□□ -0.73
SMARCD1-205ENST00000548573 MASTLQ96GX5 879 aa10.5□□□□□ -0.73
SMARCD1-205ENST00000548573 CFAP57Q96MR6 1250 aa10.5□□□□□ -0.73
SMARCD1-205ENST00000548573 ADAM22Q9P0K1 906 aa10.5□□□□□ -0.73
SMARCD1-205ENST00000548573 TBK1Q9UHD2 729 aa10.5□□□□□ -0.73
SMARCD1-205ENST00000548573 STK38LQ9Y2H1 464 aa10.5□□□□□ -0.73
SMARCD1-205ENST00000548573 R3HDM2Q9Y2K5 976 aaKnown RBP10.5□□□□□ -0.73
SMARCD1-205ENST00000548573 UBIAD1Q9Y5Z9 338 aa10.5□□□□□ -0.73
SMARCD1-205ENST00000548573 MYPNQ86TC9 1320 aa10.5□□□□□ -0.73
SMARCD1-205ENST00000548573 ASTN2O75129 1339 aaPredicted RBP10.5□□□□□ -0.73
SMARCD1-205ENST00000548573 A8MUI8 341 aa10.49□□□□□ -0.73
SMARCD1-205ENST00000548573 PRPF4O43172 522 aaKnown RBP eCLIP10.49□□□□□ -0.73
SMARCD1-205ENST00000548573 DIAPH2O60879 1101 aa10.49□□□□□ -0.73
SMARCD1-205ENST00000548573 CYP1A1P04798 512 aaPredicted RBP10.49□□□□□ -0.73
SMARCD1-205ENST00000548573 KRT5P13647 590 aa10.49□□□□□ -0.73
SMARCD1-205ENST00000548573 ATP2A2P16615 1042 aaKnown RBP10.49□□□□□ -0.73
SMARCD1-205ENST00000548573 KLRC2P26717 231 aa10.49□□□□□ -0.73
SMARCD1-205ENST00000548573 FOXN2P32314 431 aa10.49□□□□□ -0.73
SMARCD1-205ENST00000548573 MAGEA4P43358 317 aa10.49□□□□□ -0.73
SMARCD1-205ENST00000548573 POLGP54098 1239 aaPredicted RBP10.49□□□□□ -0.73
SMARCD1-205ENST00000548573 WDR4P57081 412 aaKnown RBP10.49□□□□□ -0.73
SMARCD1-205ENST00000548573 BPIFB4P59827 614 aa10.49□□□□□ -0.73
SMARCD1-205ENST00000548573 SETDB1Q15047 1291 aa10.49□□□□□ -0.73
SMARCD1-205ENST00000548573 SV2AQ7L0J3 742 aa10.49□□□□□ -0.73
SMARCD1-205ENST00000548573 KATNAL2Q8IYT4 538 aa10.49□□□□□ -0.73
SMARCD1-205ENST00000548573 TMEM161BQ8NDZ6 487 aa10.49□□□□□ -0.73
SMARCD1-205ENST00000548573 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.49□□□□□ -0.73
SMARCD1-205ENST00000548573 SAAL1Q96ER3 474 aa10.49□□□□□ -0.73
SMARCD1-205ENST00000548573 PWWP2AQ96N64 755 aa10.49□□□□□ -0.73
SMARCD1-205ENST00000548573 ZNF570Q96NI8 536 aa10.49□□□□□ -0.73
SMARCD1-205ENST00000548573 GPRC5CQ9NQ84 441 aa10.49□□□□□ -0.73
SMARCD1-205ENST00000548573 ANKEF1Q9NU02 776 aa10.49□□□□□ -0.73
SMARCD1-205ENST00000548573 TBC1D22BQ9NU19 505 aa10.49□□□□□ -0.73
SMARCD1-205ENST00000548573 SLC5A4Q9NY91 659 aa10.49□□□□□ -0.73
SMARCD1-205ENST00000548573 PKD2L1Q9P0L9 805 aa10.49□□□□□ -0.73
SMARCD1-205ENST00000548573 FEM1BQ9UK73 627 aa10.49□□□□□ -0.73
SMARCD1-205ENST00000548573 PCDHB2Q9Y5E7 798 aa10.49□□□□□ -0.73
SMARCD1-205ENST00000548573 SCN9AQ15858 1988 aa10.49□□□□□ -0.73
SMARCD1-205ENST00000548573 RGPD3A6NKT7 1758 aaPredicted RBP10.49□□□□□ -0.73
SMARCD1-205ENST00000548573 RGPD4Q7Z3J3 1758 aa10.49□□□□□ -0.73
SMARCD1-205ENST00000548573 UMODL1Q5DID0 1318 aa10.49□□□□□ -0.73
SMARCD1-205ENST00000548573 VPS41P49754 854 aa10.49□□□□□ -0.73
SMARCD1-205ENST00000548573 GHRHRQ02643 423 aa10.49□□□□□ -0.73
SMARCD1-205ENST00000548573 CYP24A1Q07973 514 aa10.49□□□□□ -0.73
SMARCD1-205ENST00000548573 TKFCQ3LXA3 575 aa10.49□□□□□ -0.73
SMARCD1-205ENST00000548573 SPDYAQ5MJ70 313 aa10.49□□□□□ -0.73
SMARCD1-205ENST00000548573 PCNX4Q63HM2 1172 aa10.49□□□□□ -0.73
SMARCD1-205ENST00000548573 BZW1Q7L1Q6 419 aaKnown RBP10.49□□□□□ -0.73
SMARCD1-205ENST00000548573 ANKS1BQ7Z6G8 1248 aa10.49□□□□□ -0.73
SMARCD1-205ENST00000548573 TRABD2AQ86V40 505 aa10.49□□□□□ -0.73
SMARCD1-205ENST00000548573 ERICH1Q86X53 443 aa10.49□□□□□ -0.73
SMARCD1-205ENST00000548573 OGFOD1Q8N543 542 aa10.49□□□□□ -0.73
SMARCD1-205ENST00000548573 DENND1AQ8TEH3 1009 aa10.49□□□□□ -0.73
SMARCD1-205ENST00000548573 FAXDC2Q96IV6 333 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms