RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 N4BP1O75113 896 aaKnown RBP7.34□□□□□ -1.23
SCAF11-211ENST00000547950 ZMYND10O75800 440 aa7.34□□□□□ -1.23
SCAF11-211ENST00000547950 MCF2P10911 925 aa7.34□□□□□ -1.23
SCAF11-211ENST00000547950 PLS3P13797 630 aa7.34□□□□□ -1.23
SCAF11-211ENST00000547950 GUCY2CP25092 1073 aa7.34□□□□□ -1.23
SCAF11-211ENST00000547950 UBA7P41226 1012 aa7.34□□□□□ -1.23
SCAF11-211ENST00000547950 GRM5P41594 1212 aa7.34□□□□□ -1.23
SCAF11-211ENST00000547950 MATR3P43243 847 aaKnown RBP eCLIP7.34□□□□□ -1.23
SCAF11-211ENST00000547950 BRCC3P46736 316 aa7.34□□□□□ -1.23
SCAF11-211ENST00000547950 NTHL1P78549 312 aa7.34□□□□□ -1.23
SCAF11-211ENST00000547950 PLCB2Q00722 1185 aa7.34□□□□□ -1.23
SCAF11-211ENST00000547950 SOX4Q06945 474 aaPredicted RBP7.34□□□□□ -1.23
SCAF11-211ENST00000547950 UPP1Q16831 310 aa7.34□□□□□ -1.23
SCAF11-211ENST00000547950 SEZ6Q53EL9 994 aa7.34□□□□□ -1.23
SCAF11-211ENST00000547950 ARSHQ5FYA8 562 aa7.34□□□□□ -1.23
SCAF11-211ENST00000547950 PPM1LQ5SGD2 360 aa7.34□□□□□ -1.23
SCAF11-211ENST00000547950 HYIQ5T013 277 aa7.34□□□□□ -1.23
SCAF11-211ENST00000547950 LIN9Q5TKA1 542 aa7.34□□□□□ -1.23
SCAF11-211ENST00000547950 ARL6IP4Q66PJ3 421 aaKnown RBP7.34□□□□□ -1.23
SCAF11-211ENST00000547950 MPZL3Q6UWV2 235 aa7.34□□□□□ -1.23
SCAF11-211ENST00000547950 ALKAL1Q6UXT8 129 aa7.34□□□□□ -1.23
SCAF11-211ENST00000547950 GET4Q7L5D6 327 aaPredicted RBP7.34□□□□□ -1.23
SCAF11-211ENST00000547950 GRASPQ7Z6J2 395 aaPredicted RBP7.34□□□□□ -1.23
SCAF11-211ENST00000547950 GPR65Q8IYL9 337 aa7.34□□□□□ -1.23
SCAF11-211ENST00000547950 RASSF8Q8NHQ8 419 aa7.34□□□□□ -1.23
SCAF11-211ENST00000547950 SPIRE2Q8WWL2 714 aa7.34□□□□□ -1.23
SCAF11-211ENST00000547950 PIK3R5Q8WYR1 880 aa7.34□□□□□ -1.23
SCAF11-211ENST00000547950 STAMQ92783 540 aa7.34□□□□□ -1.23
SCAF11-211ENST00000547950 ATOH1Q92858 354 aaPredicted RBP7.34□□□□□ -1.23
SCAF11-211ENST00000547950 C18orf25Q96B23 403 aaPredicted RBP7.34□□□□□ -1.23
SCAF11-211ENST00000547950 BICD1Q96G01 975 aa7.34□□□□□ -1.23
SCAF11-211ENST00000547950 UROC1Q96N76 676 aa7.34□□□□□ -1.23
SCAF11-211ENST00000547950 ZMAT2Q96NC0 199 aaKnown RBP7.34□□□□□ -1.23
SCAF11-211ENST00000547950 TBC1D32Q96NH3 1257 aa7.34□□□□□ -1.23
SCAF11-211ENST00000547950 PPP1R10Q96QC0 940 aaKnown RBP7.34□□□□□ -1.23
SCAF11-211ENST00000547950 MYADMQ96S97 322 aa7.34□□□□□ -1.23
SCAF11-211ENST00000547950 PHOX2BQ99453 314 aa7.34□□□□□ -1.23
SCAF11-211ENST00000547950 PRRX2Q99811 253 aa7.34□□□□□ -1.23
SCAF11-211ENST00000547950 NTPCRQ9BSD7 190 aaKnown RBP7.34□□□□□ -1.23
SCAF11-211ENST00000547950 TMUB1Q9BVT8 246 aa7.34□□□□□ -1.23
SCAF11-211ENST00000547950 TIPINQ9BVW5 301 aa7.34□□□□□ -1.23
SCAF11-211ENST00000547950 ZHX3Q9H4I2 956 aa7.34□□□□□ -1.23
SCAF11-211ENST00000547950 TOPORSQ9NS56 1045 aaPredicted RBP7.34□□□□□ -1.23
SCAF11-211ENST00000547950 ZDHHC7Q9NXF8 308 aa7.34□□□□□ -1.23
SCAF11-211ENST00000547950 ARHGAP28Q9P2N2 729 aa7.34□□□□□ -1.23
SCAF11-211ENST00000547950 ANKFY1Q9P2R3 1169 aa7.34□□□□□ -1.23
SCAF11-211ENST00000547950 C5orf42Q9H799 3197 aa7.34□□□□□ -1.23
SCAF11-211ENST00000547950 CLUHO75153 1309 aa7.33□□□□□ -1.24
SCAF11-211ENST00000547950 PHLPP2Q6ZVD8 1323 aa7.33□□□□□ -1.24
SCAF11-211ENST00000547950 VPS37CA5D8V6 355 aaPredicted RBP7.33□□□□□ -1.24
SCAF11-211ENST00000547950 RNF223E7ERA6 249 aa7.33□□□□□ -1.24
SCAF11-211ENST00000547950 H0Y858 1186 aa7.33□□□□□ -1.24
SCAF11-211ENST00000547950 PODXLO00592 558 aa7.33□□□□□ -1.24
SCAF11-211ENST00000547950 CCL16O15467 120 aa7.33□□□□□ -1.24
SCAF11-211ENST00000547950 CLDN3O15551 220 aa7.33□□□□□ -1.24
SCAF11-211ENST00000547950 ACTN4O43707 911 aaKnown RBP7.33□□□□□ -1.24
SCAF11-211ENST00000547950 NARSO43776 548 aaKnown RBP7.33□□□□□ -1.24
SCAF11-211ENST00000547950 TOM1L1O75674 476 aa7.33□□□□□ -1.24
SCAF11-211ENST00000547950 C1RP00736 705 aa7.33□□□□□ -1.24
SCAF11-211ENST00000547950 KRT18P05783 430 aaKnown RBP7.33□□□□□ -1.24
SCAF11-211ENST00000547950 C8AP07357 584 aa7.33□□□□□ -1.24
SCAF11-211ENST00000547950 MAPTP10636 758 aaKnown RBP7.33□□□□□ -1.24
SCAF11-211ENST00000547950 LAMP2P13473 410 aa7.33□□□□□ -1.24
SCAF11-211ENST00000547950 FGFR3P22607 806 aa7.33□□□□□ -1.24
SCAF11-211ENST00000547950 FSHRP23945 695 aa7.33□□□□□ -1.24
SCAF11-211ENST00000547950 TKTP29401 623 aaKnown RBP7.33□□□□□ -1.24
SCAF11-211ENST00000547950 SLC12A3P55017 1021 aa7.33□□□□□ -1.24
SCAF11-211ENST00000547950 ARPP19P56211 112 aa7.33□□□□□ -1.24
SCAF11-211ENST00000547950 GRIN1Q05586 938 aa7.33□□□□□ -1.24
SCAF11-211ENST00000547950 SPAG1Q07617 926 aa7.33□□□□□ -1.24
SCAF11-211ENST00000547950 TCF15Q12870 199 aa7.33□□□□□ -1.24
SCAF11-211ENST00000547950 RAB33AQ14088 237 aa7.33□□□□□ -1.24
SCAF11-211ENST00000547950 SF3A1Q15459 793 aaKnown RBP7.33□□□□□ -1.24
SCAF11-211ENST00000547950 AXDND1Q5T1B0 1012 aaPredicted RBP7.33□□□□□ -1.24
SCAF11-211ENST00000547950 PDXDC1Q6P996 788 aa7.33□□□□□ -1.24
SCAF11-211ENST00000547950 CD300LGQ6UXG3 332 aa7.33□□□□□ -1.24
SCAF11-211ENST00000547950 RSPO2Q6UXX9 243 aaPredicted RBP7.33□□□□□ -1.24
SCAF11-211ENST00000547950 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.33□□□□□ -1.24
SCAF11-211ENST00000547950 SLC44A3Q8N4M1 653 aa7.33□□□□□ -1.24
SCAF11-211ENST00000547950 KCTD17Q8N5Z5 321 aa7.33□□□□□ -1.24
SCAF11-211ENST00000547950 MYCT1Q8N699 235 aa7.33□□□□□ -1.24
SCAF11-211ENST00000547950 TMEM105Q8N8V8 129 aa7.33□□□□□ -1.24
SCAF11-211ENST00000547950 C3orf58Q8NDZ4 430 aa7.33□□□□□ -1.24
SCAF11-211ENST00000547950 TMEM161BQ8NDZ6 487 aa7.33□□□□□ -1.24
SCAF11-211ENST00000547950 SLC7A14Q8TBB6 771 aa7.33□□□□□ -1.24
SCAF11-211ENST00000547950 CALML4Q96GE6 196 aa7.33□□□□□ -1.24
SCAF11-211ENST00000547950 AK8Q96MA6 479 aa7.33□□□□□ -1.24
SCAF11-211ENST00000547950 RHOBTB2Q9BYZ6 727 aa7.33□□□□□ -1.24
SCAF11-211ENST00000547950 SLC38A7Q9NVC3 462 aa7.33□□□□□ -1.24
SCAF11-211ENST00000547950 FAM86C1Q9NVL1 165 aa7.33□□□□□ -1.24
SCAF11-211ENST00000547950 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.33□□□□□ -1.24
SCAF11-211ENST00000547950 IGSF9Q9P2J2 1179 aa7.33□□□□□ -1.24
SCAF11-211ENST00000547950 LARSQ9P2J5 1176 aaKnown RBP7.33□□□□□ -1.24
SCAF11-211ENST00000547950 DAXXQ9UER7 740 aaPredicted RBP7.33□□□□□ -1.24
SCAF11-211ENST00000547950 NUB1Q9Y5A7 615 aa7.33□□□□□ -1.24
SCAF11-211ENST00000547950 CDY1Q9Y6F8 540 aa7.33□□□□□ -1.24
SCAF11-211ENST00000547950 H0YCG3 227 aa7.32□□□□□ -1.24
SCAF11-211ENST00000547950 TMEM189-UBE2V1I3L0A0 370 aa7.32□□□□□ -1.24
SCAF11-211ENST00000547950 TULP1O00294 542 aaPredicted RBP7.32□□□□□ -1.24
SCAF11-211ENST00000547950 ABLIM1O14639 778 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms