RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 C1orf228Q6PIY5 440 aa5.23□□□□□ -1.57
SCAF11-210ENST00000547654 KCNK18Q7Z418 384 aa5.23□□□□□ -1.57
SCAF11-210ENST00000547654 SMAP1Q8IYB5 467 aaPredicted RBP5.23□□□□□ -1.57
SCAF11-210ENST00000547654 CPXCR1Q8N123 301 aa5.23□□□□□ -1.57
SCAF11-210ENST00000547654 SUPT20HQ8NEM7 779 aa5.23□□□□□ -1.57
SCAF11-210ENST00000547654 GAB3Q8WWW8 586 aa5.23□□□□□ -1.57
SCAF11-210ENST00000547654 GJA10Q969M2 543 aa5.23□□□□□ -1.57
SCAF11-210ENST00000547654 HIST1H2AHQ96KK5 128 aa5.23□□□□□ -1.57
SCAF11-210ENST00000547654 BBC3Q96PG8 261 aaPredicted RBP5.23□□□□□ -1.57
SCAF11-210ENST00000547654 UIMC1Q96RL1 719 aa5.23□□□□□ -1.57
SCAF11-210ENST00000547654 HIST1H2AJQ99878 128 aa5.23□□□□□ -1.57
SCAF11-210ENST00000547654 CPPED1Q9BRF8 314 aaPredicted RBP5.23□□□□□ -1.57
SCAF11-210ENST00000547654 LSM14BQ9BX40 385 aaKnown RBP5.23□□□□□ -1.57
SCAF11-210ENST00000547654 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.23□□□□□ -1.57
SCAF11-210ENST00000547654 CPEB1Q9BZB8 566 aaKnown RBP5.23□□□□□ -1.57
SCAF11-210ENST00000547654 PLCB1Q9NQ66 1216 aa5.23□□□□□ -1.57
SCAF11-210ENST00000547654 ANLNQ9NQW6 1124 aa5.23□□□□□ -1.57
SCAF11-210ENST00000547654 KDM1AO60341 852 aa5.22□□□□□ -1.57
SCAF11-210ENST00000547654 OFD1O75665 1012 aa5.22□□□□□ -1.57
SCAF11-210ENST00000547654 ALDH1A2O94788 518 aa5.22□□□□□ -1.57
SCAF11-210ENST00000547654 APOL3O95236 402 aa5.22□□□□□ -1.57
SCAF11-210ENST00000547654 MYL3P08590 195 aa5.22□□□□□ -1.57
SCAF11-210ENST00000547654 CLEC2LP0C7M8 214 aa5.22□□□□□ -1.57
SCAF11-210ENST00000547654 TAP1Q03518 808 aa5.22□□□□□ -1.57
SCAF11-210ENST00000547654 STK3Q13188 491 aa5.22□□□□□ -1.57
SCAF11-210ENST00000547654 MRPL49Q13405 166 aaKnown RBP5.22□□□□□ -1.57
SCAF11-210ENST00000547654 ACAP2Q15057 778 aa5.22□□□□□ -1.57
SCAF11-210ENST00000547654 MAN2A1Q16706 1144 aa5.22□□□□□ -1.57
SCAF11-210ENST00000547654 OLFML1Q6UWY5 402 aa5.22□□□□□ -1.57
SCAF11-210ENST00000547654 CLEC4GQ6UXB4 293 aa5.22□□□□□ -1.57
SCAF11-210ENST00000547654 BTNL9Q6UXG8 535 aa5.22□□□□□ -1.57
SCAF11-210ENST00000547654 CATIPQ7Z7H3 387 aa5.22□□□□□ -1.57
SCAF11-210ENST00000547654 ACRBPQ8NEB7 543 aa5.22□□□□□ -1.57
SCAF11-210ENST00000547654 LMBR1Q8WVP7 490 aa5.22□□□□□ -1.57
SCAF11-210ENST00000547654 SCLT1Q96NL6 688 aa5.22□□□□□ -1.57
SCAF11-210ENST00000547654 ANO3Q9BYT9 981 aa5.22□□□□□ -1.57
SCAF11-210ENST00000547654 NLRC4Q9NPP4 1024 aa5.22□□□□□ -1.57
SCAF11-210ENST00000547654 CASS4Q9NQ75 786 aa5.22□□□□□ -1.57
SCAF11-210ENST00000547654 PHTF1Q9UMS5 762 aa5.22□□□□□ -1.57
SCAF11-210ENST00000547654 LZTS1Q9Y250 596 aa5.22□□□□□ -1.57
SCAF11-210ENST00000547654 CDY2AQ9Y6F7 541 aa5.22□□□□□ -1.57
SCAF11-210ENST00000547654 CENPVL1A0A0U1RR11 272 aa5.21□□□□□ -1.58
SCAF11-210ENST00000547654 KLHL33A6NCF5 533 aa5.21□□□□□ -1.58
SCAF11-210ENST00000547654 HOXA3O43365 443 aaPredicted RBP5.21□□□□□ -1.58
SCAF11-210ENST00000547654 SCAND1P57086 179 aa5.21□□□□□ -1.58
SCAF11-210ENST00000547654 ZNF280AP59817 542 aaPredicted RBP5.21□□□□□ -1.58
SCAF11-210ENST00000547654 CHAF1AQ13111 956 aaPredicted RBP5.21□□□□□ -1.58
SCAF11-210ENST00000547654 UBE3CQ15386 1083 aa5.21□□□□□ -1.58
SCAF11-210ENST00000547654 FSCN1Q16658 493 aaKnown RBP5.21□□□□□ -1.58
SCAF11-210ENST00000547654 C19orf54Q5BKX5 351 aa5.21□□□□□ -1.58
SCAF11-210ENST00000547654 ABHD15Q6UXT9 468 aa5.21□□□□□ -1.58
SCAF11-210ENST00000547654 Q6YL49 198 aa5.21□□□□□ -1.58
SCAF11-210ENST00000547654 TOGARAM2Q6ZUX3 1019 aa5.21□□□□□ -1.58
SCAF11-210ENST00000547654 RD3Q7Z3Z2 195 aa5.21□□□□□ -1.58
SCAF11-210ENST00000547654 NME8Q8N427 588 aa5.21□□□□□ -1.58
SCAF11-210ENST00000547654 GLB1L3Q8NCI6 653 aaPredicted RBP5.21□□□□□ -1.58
SCAF11-210ENST00000547654 OR52N2Q8NGI0 321 aa5.21□□□□□ -1.58
SCAF11-210ENST00000547654 NTN5Q8WTR8 489 aaPredicted RBP5.21□□□□□ -1.58
SCAF11-210ENST00000547654 TSPEARQ8WU66 669 aa5.21□□□□□ -1.58
SCAF11-210ENST00000547654 RSAD2Q8WXG1 361 aa5.21□□□□□ -1.58
SCAF11-210ENST00000547654 HOXB13Q92826 284 aaPredicted RBP5.21□□□□□ -1.58
SCAF11-210ENST00000547654 SLC46A2Q9BY10 475 aa5.21□□□□□ -1.58
SCAF11-210ENST00000547654 TMX4Q9H1E5 349 aaPredicted RBP5.21□□□□□ -1.58
SCAF11-210ENST00000547654 KCNH6Q9H252 994 aa5.21□□□□□ -1.58
SCAF11-210ENST00000547654 ZNF768Q9H5H4 540 aaKnown RBP5.21□□□□□ -1.58
SCAF11-210ENST00000547654 FAM204AQ9H8W3 233 aa5.21□□□□□ -1.58
SCAF11-210ENST00000547654 DDX20Q9UHI6 824 aaKnown RBP5.21□□□□□ -1.58
SCAF11-210ENST00000547654 CTNND1O60716 968 aaKnown RBP5.2□□□□□ -1.58
SCAF11-210ENST00000547654 HSP90AA1P07900 732 aaKnown RBP5.2□□□□□ -1.58
SCAF11-210ENST00000547654 ZNF37AP17032 561 aaPredicted RBP5.2□□□□□ -1.58
SCAF11-210ENST00000547654 AVPR1BP47901 424 aa5.2□□□□□ -1.58
SCAF11-210ENST00000547654 AK2P54819 239 aa5.2□□□□□ -1.58
SCAF11-210ENST00000547654 CT83Q5H943 113 aa5.2□□□□□ -1.58
SCAF11-210ENST00000547654 RRP12Q5JTH9 1297 aaKnown RBP5.2□□□□□ -1.58
SCAF11-210ENST00000547654 METTL24Q5JXM2 366 aa5.2□□□□□ -1.58
SCAF11-210ENST00000547654 METRNLQ641Q3 311 aa5.2□□□□□ -1.58
SCAF11-210ENST00000547654 CCDC70Q6NSX1 233 aa5.2□□□□□ -1.58
SCAF11-210ENST00000547654 SRLQ86TD4 932 aa5.2□□□□□ -1.58
SCAF11-210ENST00000547654 ZNF354CQ86Y25 554 aa5.2□□□□□ -1.58
SCAF11-210ENST00000547654 FAM186BQ8IYM0 893 aa5.2□□□□□ -1.58
SCAF11-210ENST00000547654 PARD3BQ8TEW8 1205 aa5.2□□□□□ -1.58
SCAF11-210ENST00000547654 RUNDC1Q96C34 613 aa5.2□□□□□ -1.58
SCAF11-210ENST00000547654 MYEOVQ96EZ4 313 aa5.2□□□□□ -1.58
SCAF11-210ENST00000547654 PDCD2LQ9BRP1 358 aa5.2□□□□□ -1.58
SCAF11-210ENST00000547654 HERPUD2Q9BSE4 406 aa5.2□□□□□ -1.58
SCAF11-210ENST00000547654 KCTD10Q9H3F6 313 aa5.2□□□□□ -1.58
SCAF11-210ENST00000547654 DDX21Q9NR30 783 aaKnown RBP eCLIP5.2□□□□□ -1.58
SCAF11-210ENST00000547654 KLHL11Q9NVR0 708 aa5.2□□□□□ -1.58
SCAF11-210ENST00000547654 DKK2Q9UBU2 259 aa5.2□□□□□ -1.58
SCAF11-210ENST00000547654 SWAP70Q9UH65 585 aa5.2□□□□□ -1.58
SCAF11-210ENST00000547654 FBXO9Q9UK97 447 aaPredicted RBP5.2□□□□□ -1.58
SCAF11-210ENST00000547654 HDAC5Q9UQL6 1122 aa5.2□□□□□ -1.58
SCAF11-210ENST00000547654 DMTF1Q9Y222 760 aa5.2□□□□□ -1.58
SCAF11-210ENST00000547654 LAS1LQ9Y4W2 734 aaKnown RBP5.2□□□□□ -1.58
SCAF11-210ENST00000547654 TRIM75PA6NK02 468 aa5.19□□□□□ -1.58
SCAF11-210ENST00000547654 GOLGA8AA7E2F4 631 aa5.19□□□□□ -1.58
SCAF11-210ENST00000547654 AP1G1O43747 822 aa5.19□□□□□ -1.58
SCAF11-210ENST00000547654 SERPINB3P29508 390 aa5.19□□□□□ -1.58
SCAF11-210ENST00000547654 WNT3AP56704 352 aa5.19□□□□□ -1.58
SCAF11-210ENST00000547654 KRTAP10-9P60411 292 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms