RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 JADE1Q6IE81 842 aa12.86□□□□□ -0.35
RAB5C-204ENST00000547517 ARMCX5Q6P1M9 558 aa12.86□□□□□ -0.35
RAB5C-204ENST00000547517 SYCE2Q6PIF2 218 aa12.86□□□□□ -0.35
RAB5C-204ENST00000547517 DCLRE1AQ6PJP8 1040 aa12.86□□□□□ -0.35
RAB5C-204ENST00000547517 PPFIBP1Q86W92 1011 aa12.86□□□□□ -0.35
RAB5C-204ENST00000547517 NOC3LQ8WTT2 800 aaKnown RBP12.86□□□□□ -0.35
RAB5C-204ENST00000547517 SLC22A17Q8WUG5 538 aa12.86□□□□□ -0.35
RAB5C-204ENST00000547517 SAAL1Q96ER3 474 aa12.86□□□□□ -0.35
RAB5C-204ENST00000547517 DDX27Q96GQ7 796 aaKnown RBP12.86□□□□□ -0.35
RAB5C-204ENST00000547517 CBWD1Q9BRT8 395 aa12.86□□□□□ -0.35
RAB5C-204ENST00000547517 FAM213AQ9BRX8 229 aa12.86□□□□□ -0.35
RAB5C-204ENST00000547517 TTPALQ9BTX7 342 aa12.86□□□□□ -0.35
RAB5C-204ENST00000547517 TMEM206Q9H813 350 aa12.86□□□□□ -0.35
RAB5C-204ENST00000547517 USP25Q9UHP3 1055 aa12.86□□□□□ -0.35
RAB5C-204ENST00000547517 UBQLN1Q9UMX0 589 aaKnown RBP12.86□□□□□ -0.35
RAB5C-204ENST00000547517 FAM237AA0A1B0GTK4 181 aa12.85□□□□□ -0.35
RAB5C-204ENST00000547517 EIF3DO15371 548 aaKnown RBP eCLIP12.85□□□□□ -0.35
RAB5C-204ENST00000547517 XPOTO43592 962 aaKnown RBP12.85□□□□□ -0.35
RAB5C-204ENST00000547517 GLUD1P00367 558 aa12.85□□□□□ -0.35
RAB5C-204ENST00000547517 PRR29P0C7W0 189 aa12.85□□□□□ -0.35
RAB5C-204ENST00000547517 TKTP29401 623 aaKnown RBP12.85□□□□□ -0.35
RAB5C-204ENST00000547517 RPL9P32969 192 aaKnown RBP12.85□□□□□ -0.35
RAB5C-204ENST00000547517 CREMQ03060 361 aa12.85□□□□□ -0.35
RAB5C-204ENST00000547517 EHHADHQ08426 723 aa12.85□□□□□ -0.35
RAB5C-204ENST00000547517 TMEM132DQ14C87 1099 aa12.85□□□□□ -0.35
RAB5C-204ENST00000547517 SMAD2Q15796 467 aaKnown RBP12.85□□□□□ -0.35
RAB5C-204ENST00000547517 PSMD5Q16401 504 aa12.85□□□□□ -0.35
RAB5C-204ENST00000547517 RARS2Q5T160 578 aaKnown RBP12.85□□□□□ -0.35
RAB5C-204ENST00000547517 CD300LGQ6UXG3 332 aa12.85□□□□□ -0.35
RAB5C-204ENST00000547517 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.85□□□□□ -0.35
RAB5C-204ENST00000547517 EPM2AIP1Q7L775 607 aaPredicted RBP12.85□□□□□ -0.35
RAB5C-204ENST00000547517 NELFCDQ8IXH7 590 aa12.85□□□□□ -0.35
RAB5C-204ENST00000547517 ZSWIM2Q8NEG5 633 aa12.85□□□□□ -0.35
RAB5C-204ENST00000547517 FBXL18Q96ME1 805 aa12.85□□□□□ -0.35
RAB5C-204ENST00000547517 PCIF1Q9H4Z3 704 aa12.85□□□□□ -0.35
RAB5C-204ENST00000547517 RXFP1Q9HBX9 757 aa12.85□□□□□ -0.35
RAB5C-204ENST00000547517 SLC39A2Q9NP94 309 aa12.85□□□□□ -0.35
RAB5C-204ENST00000547517 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.85□□□□□ -0.35
RAB5C-204ENST00000547517 EXOC1Q9NV70 894 aa12.85□□□□□ -0.35
RAB5C-204ENST00000547517 DZANK1Q9NVP4 752 aa12.85□□□□□ -0.35
RAB5C-204ENST00000547517 CDH22Q9UJ99 828 aa12.85□□□□□ -0.35
RAB5C-204ENST00000547517 NUB1Q9Y5A7 615 aa12.85□□□□□ -0.35
RAB5C-204ENST00000547517 UBE4BO95155 1302 aa12.85□□□□□ -0.35
RAB5C-204ENST00000547517 PLXNA3P51805 1871 aa12.85□□□□□ -0.35
RAB5C-204ENST00000547517 VWA8A3KMH1 1905 aa12.84□□□□□ -0.35
RAB5C-204ENST00000547517 MUC3AQ02505 3323 aa12.84□□□□□ -0.35
RAB5C-204ENST00000547517 PVALEFA0A1B0GWK0 134 aa12.84□□□□□ -0.35
RAB5C-204ENST00000547517 GOLGA8IPA6NC78 632 aa12.84□□□□□ -0.35
RAB5C-204ENST00000547517 GOLGA6L4A6NEF3 574 aa12.84□□□□□ -0.35
RAB5C-204ENST00000547517 GOLGA8JA6NMD2 632 aa12.84□□□□□ -0.35
RAB5C-204ENST00000547517 TNFRSF10AO00220 468 aa12.84□□□□□ -0.35
RAB5C-204ENST00000547517 TRAPPC3O43617 180 aa12.84□□□□□ -0.35
RAB5C-204ENST00000547517 KLRC4O43908 158 aa12.84□□□□□ -0.35
RAB5C-204ENST00000547517 ADRB2P07550 413 aa12.84□□□□□ -0.35
RAB5C-204ENST00000547517 HOXB8P17481 243 aaPredicted RBP12.84□□□□□ -0.35
RAB5C-204ENST00000547517 GARTP22102 1010 aa12.84□□□□□ -0.35
RAB5C-204ENST00000547517 FGFR3P22607 806 aa12.84□□□□□ -0.35
RAB5C-204ENST00000547517 SSTR3P32745 418 aaPredicted RBP12.84□□□□□ -0.35
RAB5C-204ENST00000547517 MCM4P33991 863 aa12.84□□□□□ -0.35
RAB5C-204ENST00000547517 KMT5BQ4FZB7 885 aa12.84□□□□□ -0.35
RAB5C-204ENST00000547517 CRELD2Q6UXH1 353 aaPredicted RBP12.84□□□□□ -0.35
RAB5C-204ENST00000547517 KRBA2Q6ZNG9 492 aa12.84□□□□□ -0.35
RAB5C-204ENST00000547517 PALB2Q86YC2 1186 aa12.84□□□□□ -0.35
RAB5C-204ENST00000547517 CD302Q8IX05 232 aa12.84□□□□□ -0.35
RAB5C-204ENST00000547517 GPR65Q8IYL9 337 aa12.84□□□□□ -0.35
RAB5C-204ENST00000547517 C12orf76Q8N812 135 aaPredicted RBP12.84□□□□□ -0.35
RAB5C-204ENST00000547517 BEST2Q8NFU1 509 aa12.84□□□□□ -0.35
RAB5C-204ENST00000547517 SCFD1Q8WVM8 642 aa12.84□□□□□ -0.35
RAB5C-204ENST00000547517 PIK3R5Q8WYR1 880 aa12.84□□□□□ -0.35
RAB5C-204ENST00000547517 S1PR5Q9H228 398 aa12.84□□□□□ -0.35
RAB5C-204ENST00000547517 SFXN1Q9H9B4 322 aa12.84□□□□□ -0.35
RAB5C-204ENST00000547517 MAN1C1Q9NR34 630 aa12.84□□□□□ -0.35
RAB5C-204ENST00000547517 RBAKQ9NYW8 714 aaPredicted RBP12.84□□□□□ -0.35
RAB5C-204ENST00000547517 CIZ1Q9ULV3 898 aaPredicted RBP12.84□□□□□ -0.35
RAB5C-204ENST00000547517 C5orf42Q9H799 3197 aa12.83□□□□□ -0.35
RAB5C-204ENST00000547517 ANK1P16157 1881 aa12.83□□□□□ -0.36
RAB5C-204ENST00000547517 EXTL3O43909 919 aa12.83□□□□□ -0.36
RAB5C-204ENST00000547517 WEE2P0C1S8 567 aa12.83□□□□□ -0.36
RAB5C-204ENST00000547517 CYP3A5P20815 502 aa12.83□□□□□ -0.36
RAB5C-204ENST00000547517 LRPAP1P30533 357 aa12.83□□□□□ -0.36
RAB5C-204ENST00000547517 HOXD13P35453 343 aa12.83□□□□□ -0.36
RAB5C-204ENST00000547517 WNT7BP56706 349 aa12.83□□□□□ -0.36
RAB5C-204ENST00000547517 ZP2Q05996 745 aa12.83□□□□□ -0.36
RAB5C-204ENST00000547517 ZBTB6Q15916 424 aa12.83□□□□□ -0.36
RAB5C-204ENST00000547517 KANK3Q6NY19 840 aa12.83□□□□□ -0.36
RAB5C-204ENST00000547517 PDXDC1Q6P996 788 aa12.83□□□□□ -0.36
RAB5C-204ENST00000547517 TMC5Q6UXY8 1006 aa12.83□□□□□ -0.36
RAB5C-204ENST00000547517 BRSK2Q8IWQ3 736 aa12.83□□□□□ -0.36
RAB5C-204ENST00000547517 ADHFE1Q8IWW8 467 aa12.83□□□□□ -0.36
RAB5C-204ENST00000547517 EFCAB13Q8IY85 973 aa12.83□□□□□ -0.36
RAB5C-204ENST00000547517 GPD1LQ8N335 351 aa12.83□□□□□ -0.36
RAB5C-204ENST00000547517 LNX1Q8TBB1 728 aaPredicted RBP12.83□□□□□ -0.36
RAB5C-204ENST00000547517 SUSD6Q92537 303 aa12.83□□□□□ -0.36
RAB5C-204ENST00000547517 ASB7Q9H672 318 aa12.83□□□□□ -0.36
RAB5C-204ENST00000547517 FNIP2Q9P278 1114 aa12.83□□□□□ -0.36
RAB5C-204ENST00000547517 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.83□□□□□ -0.36
RAB5C-204ENST00000547517 PPEF2O14830 753 aa12.82□□□□□ -0.36
RAB5C-204ENST00000547517 ADAM12O43184 909 aa12.82□□□□□ -0.36
RAB5C-204ENST00000547517 TGM5O43548 720 aa12.82□□□□□ -0.36
RAB5C-204ENST00000547517 ZNF202O95125 648 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms