RNA–Protein interactions for RNA: ENST00000547374.5

BRF1-210, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 5

Gene BRF1, Length 3,809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-210ENST00000547374 LMO3Q8TAP4 145 aa13.8□□□□□ -0.2
BRF1-210ENST00000547374 PARD3BQ8TEW8 1205 aa13.8□□□□□ -0.2
BRF1-210ENST00000547374 SPDL1Q96EA4 605 aa13.8□□□□□ -0.2
BRF1-210ENST00000547374 MBOAT7Q96N66 472 aa13.8□□□□□ -0.2
BRF1-210ENST00000547374 TBX20Q9UMR3 447 aa13.8□□□□□ -0.2
BRF1-210ENST00000547374 TCF4P15884 667 aa13.79□□□□□ -0.2
BRF1-210ENST00000547374 HOXA10P31260 410 aaPredicted RBP13.79□□□□□ -0.2
BRF1-210ENST00000547374 COPS2P61201 443 aa13.79□□□□□ -0.2
BRF1-210ENST00000547374 TAF11Q15544 211 aa13.79□□□□□ -0.2
BRF1-210ENST00000547374 TKFCQ3LXA3 575 aa13.79□□□□□ -0.2
BRF1-210ENST00000547374 ACAD10Q6JQN1 1059 aa13.79□□□□□ -0.2
BRF1-210ENST00000547374 ZC3H3Q8IXZ2 948 aaKnown RBP13.79□□□□□ -0.2
BRF1-210ENST00000547374 TMEM121Q9BTD3 319 aa13.79□□□□□ -0.2
BRF1-210ENST00000547374 YIPF3Q9GZM5 350 aa13.79□□□□□ -0.2
BRF1-210ENST00000547374 SERPINA10Q9UK55 444 aa13.79□□□□□ -0.2
BRF1-210ENST00000547374 ENO4A6NNW6 628 aa13.79□□□□□ -0.2
BRF1-210ENST00000547374 HOXA7P31268 230 aaPredicted RBP13.79□□□□□ -0.2
BRF1-210ENST00000547374 MAGEA4P43358 317 aa13.79□□□□□ -0.2
BRF1-210ENST00000547374 PKN2Q16513 984 aaKnown RBP13.79□□□□□ -0.2
BRF1-210ENST00000547374 CCDC33Q8N5R6 958 aa13.79□□□□□ -0.2
BRF1-210ENST00000547374 ATL2Q8NHH9 583 aa13.79□□□□□ -0.2
BRF1-210ENST00000547374 SMC6Q96SB8 1091 aa13.79□□□□□ -0.2
BRF1-210ENST00000547374 DMAC2Q9NW81 257 aa13.79□□□□□ -0.2
BRF1-210ENST00000547374 ARL2BPQ9Y2Y0 163 aa13.79□□□□□ -0.2
BRF1-210ENST00000547374 DDX60LQ5H9U9 1706 aaKnown RBP13.79□□□□□ -0.2
BRF1-210ENST00000547374 ANXA13P27216 316 aa13.79□□□□□ -0.2
BRF1-210ENST00000547374 ADSSP30520 456 aa13.79□□□□□ -0.2
BRF1-210ENST00000547374 GNA15P30679 374 aa13.79□□□□□ -0.2
BRF1-210ENST00000547374 NCALDP61601 193 aa13.79□□□□□ -0.2
BRF1-210ENST00000547374 RPL7AP62424 266 aaKnown RBP13.79□□□□□ -0.2
BRF1-210ENST00000547374 WDR78Q5VTH9 848 aa13.79□□□□□ -0.2
BRF1-210ENST00000547374 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.79□□□□□ -0.2
BRF1-210ENST00000547374 QTRT2Q9H974 415 aaKnown RBP13.79□□□□□ -0.2
BRF1-210ENST00000547374 PCYOX1Q9UHG3 505 aa13.79□□□□□ -0.2
BRF1-210ENST00000547374 PHLPP1O60346 1717 aa13.78□□□□□ -0.2
BRF1-210ENST00000547374 PEX10O60683 326 aa13.78□□□□□ -0.2
BRF1-210ENST00000547374 ZBTB48P10074 688 aaPredicted RBP13.78□□□□□ -0.2
BRF1-210ENST00000547374 NRLP54845 237 aa13.78□□□□□ -0.2
BRF1-210ENST00000547374 BASP1P80723 227 aaKnown RBP13.78□□□□□ -0.2
BRF1-210ENST00000547374 PLCB4Q15147 1175 aa13.78□□□□□ -0.2
BRF1-210ENST00000547374 C11orf63Q6NUN7 778 aa13.78□□□□□ -0.2
BRF1-210ENST00000547374 FOXR2Q6PJQ5 311 aa13.78□□□□□ -0.2
BRF1-210ENST00000547374 FAM71AQ8IYT1 594 aa13.78□□□□□ -0.2
BRF1-210ENST00000547374 DTX3LQ8TDB6 740 aa13.78□□□□□ -0.2
BRF1-210ENST00000547374 CRYGNQ8WXF5 182 aa13.78□□□□□ -0.2
BRF1-210ENST00000547374 ART4Q93070 314 aa13.78□□□□□ -0.2
BRF1-210ENST00000547374 TRABDQ9H4I3 376 aa13.78□□□□□ -0.2
BRF1-210ENST00000547374 DNPEPQ9ULA0 475 aa13.78□□□□□ -0.2
BRF1-210ENST00000547374 SUGT1Q9Y2Z0 365 aa13.78□□□□□ -0.2
BRF1-210ENST00000547374 NEU2Q9Y3R4 380 aa13.78□□□□□ -0.2
BRF1-210ENST00000547374 NAV1Q8NEY1 1877 aa13.78□□□□□ -0.2
BRF1-210ENST00000547374 SCN7AQ01118 1682 aa13.78□□□□□ -0.2
BRF1-210ENST00000547374 MARK3P27448 753 aa13.78□□□□□ -0.2
BRF1-210ENST00000547374 CPA2P48052 419 aa13.78□□□□□ -0.2
BRF1-210ENST00000547374 STRN3Q13033 797 aa13.78□□□□□ -0.2
BRF1-210ENST00000547374 XRCC4Q13426 336 aa13.78□□□□□ -0.2
BRF1-210ENST00000547374 BAATQ14032 418 aaPredicted RBP13.78□□□□□ -0.2
BRF1-210ENST00000547374 USP37Q86T82 979 aa13.78□□□□□ -0.2
BRF1-210ENST00000547374 BSNDQ8WZ55 320 aa13.78□□□□□ -0.2
BRF1-210ENST00000547374 RPS6KC1Q96S38 1066 aa13.78□□□□□ -0.2
BRF1-210ENST00000547374 GINM1Q9NU53 330 aa13.78□□□□□ -0.2
BRF1-210ENST00000547374 NOP53Q9NZM5 478 aaKnown RBP13.78□□□□□ -0.2
BRF1-210ENST00000547374 NOCTQ9UK39 431 aaKnown RBP13.78□□□□□ -0.2
BRF1-210ENST00000547374 PLIN4Q96Q06 1357 aa13.78□□□□□ -0.2
BRF1-210ENST00000547374 VIL1P09327 827 aaKnown RBP13.78□□□□□ -0.2
BRF1-210ENST00000547374 WEE2P0C1S8 567 aa13.78□□□□□ -0.2
BRF1-210ENST00000547374 ITIH2P19823 946 aa13.78□□□□□ -0.2
BRF1-210ENST00000547374 MSH2P43246 934 aa13.78□□□□□ -0.2
BRF1-210ENST00000547374 POLGP54098 1239 aaPredicted RBP13.78□□□□□ -0.2
BRF1-210ENST00000547374 SPP2Q13103 211 aa13.78□□□□□ -0.2
BRF1-210ENST00000547374 TATDN1Q6P1N9 297 aa13.78□□□□□ -0.2
BRF1-210ENST00000547374 VSTM1Q6UX27 236 aa13.78□□□□□ -0.2
BRF1-210ENST00000547374 EIF1ADQ8N9N8 165 aaKnown RBP13.78□□□□□ -0.2
BRF1-210ENST00000547374 GMCL1P1Q8NEA9 526 aa13.78□□□□□ -0.2
BRF1-210ENST00000547374 MCEEQ96PE7 176 aa13.78□□□□□ -0.2
BRF1-210ENST00000547374 LRRC37BQ96QE4 947 aa13.78□□□□□ -0.2
BRF1-210ENST00000547374 TRAIPQ9BWF2 469 aa13.78□□□□□ -0.2
BRF1-210ENST00000547374 YY1AP1Q9H869 796 aa13.78□□□□□ -0.2
BRF1-210ENST00000547374 UBN1Q9NPG3 1134 aa13.78□□□□□ -0.2
BRF1-210ENST00000547374 METTL5Q9NRN9 209 aaKnown RBP13.78□□□□□ -0.2
BRF1-210ENST00000547374 IKBKGQ9Y6K9 419 aa13.78□□□□□ -0.2
BRF1-210ENST00000547374 AFF2P51816 1311 aa13.78□□□□□ -0.2
BRF1-210ENST00000547374 CFAP69A5D8W1 941 aa13.77□□□□□ -0.2
BRF1-210ENST00000547374 ASAP2O43150 1006 aa13.77□□□□□ -0.2
BRF1-210ENST00000547374 HLA-DRAP01903 254 aa13.77□□□□□ -0.2
BRF1-210ENST00000547374 ADRA2BP18089 450 aa13.77□□□□□ -0.2
BRF1-210ENST00000547374 TRAF1Q13077 416 aa13.77□□□□□ -0.2
BRF1-210ENST00000547374 C1orf220Q5T0J3 134 aa13.77□□□□□ -0.2
BRF1-210ENST00000547374 TRMT10CQ7L0Y3 403 aaKnown RBP13.77□□□□□ -0.2
BRF1-210ENST00000547374 ANKRD35Q8N283 1001 aa13.77□□□□□ -0.2
BRF1-210ENST00000547374 GRK7Q8WTQ7 553 aa13.77□□□□□ -0.2
BRF1-210ENST00000547374 IMPG2Q9BZV3 1241 aa13.77□□□□□ -0.2
BRF1-210ENST00000547374 A0A1W2PPM1 405 aa13.77□□□□□ -0.21
BRF1-210ENST00000547374 SSTR1P30872 391 aa13.77□□□□□ -0.21
BRF1-210ENST00000547374 PCNX4Q63HM2 1172 aa13.77□□□□□ -0.21
BRF1-210ENST00000547374 SCYL3Q8IZE3 742 aa13.77□□□□□ -0.21
BRF1-210ENST00000547374 CCDC89Q8N998 374 aa13.77□□□□□ -0.21
BRF1-210ENST00000547374 TTC17Q96AE7 1141 aa13.77□□□□□ -0.21
BRF1-210ENST00000547374 TARS2Q9BW92 718 aaKnown RBP13.77□□□□□ -0.21
BRF1-210ENST00000547374 CALN1Q9BXU9 219 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms