RNA–Protein interactions for RNA: ENST00000546325.1

IFI35-208, Transcript of interferon induced protein 35, human

TSL 5

Gene IFI35, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IFI35-208	ENST00000546325	MUT	P22033	750 aa		13.79	□□□□□ -0.2
IFI35-208	ENST00000546325	FGFR3	P22607	806 aa		13.79	□□□□□ -0.2
IFI35-208	ENST00000546325	CMA1	P23946	247 aa		13.79	□□□□□ -0.2
IFI35-208	ENST00000546325	IGFBP6	P24592	240 aa	Predicted RBP	13.79	□□□□□ -0.2
IFI35-208	ENST00000546325	TKT	P29401	623 aa	Known RBP	13.79	□□□□□ -0.2
IFI35-208	ENST00000546325	HOXA9	P31269	272 aa		13.79	□□□□□ -0.2
IFI35-208	ENST00000546325	FXR2	P51116	673 aa	Known RBP eCLIP	13.79	□□□□□ -0.2
IFI35-208	ENST00000546325	CLCNKB	P51801	687 aa		13.79	□□□□□ -0.2
IFI35-208	ENST00000546325	YARS	P54577	528 aa	Known RBP	13.79	□□□□□ -0.2
IFI35-208	ENST00000546325	PEX3	P56589	373 aa		13.79	□□□□□ -0.2
IFI35-208	ENST00000546325	OSTN	P61366	133 aa		13.79	□□□□□ -0.2
IFI35-208	ENST00000546325	ZNF568	Q3ZCX4	644 aa		13.79	□□□□□ -0.2
IFI35-208	ENST00000546325	FAM173B	Q6P4H8	233 aa		13.79	□□□□□ -0.2
IFI35-208	ENST00000546325	PARM1	Q6UWI2	310 aa		13.79	□□□□□ -0.2
IFI35-208	ENST00000546325	MTSS1L	Q765P7	747 aa		13.79	□□□□□ -0.2
IFI35-208	ENST00000546325	ING5	Q8WYH8	240 aa		13.79	□□□□□ -0.2
IFI35-208	ENST00000546325	FGF13	Q92913	245 aa		13.79	□□□□□ -0.2
IFI35-208	ENST00000546325	PPP1R10	Q96QC0	940 aa	Known RBP	13.79	□□□□□ -0.2
IFI35-208	ENST00000546325	CCDC94	Q9BW85	323 aa	Predicted RBP	13.79	□□□□□ -0.2
IFI35-208	ENST00000546325	RAB34	Q9BZG1	259 aa		13.79	□□□□□ -0.2
IFI35-208	ENST00000546325	FOXQ1	Q9C009	403 aa		13.79	□□□□□ -0.2
IFI35-208	ENST00000546325	SLC2A4RG	Q9NR83	387 aa		13.79	□□□□□ -0.2
IFI35-208	ENST00000546325	HCFC1R1	Q9NWW0	138 aa		13.79	□□□□□ -0.2
IFI35-208	ENST00000546325	MTRR	Q9UBK8	725 aa		13.79	□□□□□ -0.2
IFI35-208	ENST00000546325	SIT1	Q9Y3P8	196 aa		13.79	□□□□□ -0.2
IFI35-208	ENST00000546325	CDY1	Q9Y6F8	540 aa		13.79	□□□□□ -0.2
IFI35-208	ENST00000546325		R4GN57	208 aa		13.79	□□□□□ -0.2
IFI35-208	ENST00000546325	TCHH	Q07283	1943 aa		13.78	□□□□□ -0.2
IFI35-208	ENST00000546325	TMEM189-UBE2V1	I3L0A0	370 aa		13.78	□□□□□ -0.2
IFI35-208	ENST00000546325	TRAPPC3	O43617	180 aa		13.78	□□□□□ -0.2
IFI35-208	ENST00000546325	CAVIN2	O95810	425 aa		13.78	□□□□□ -0.2
IFI35-208	ENST00000546325	HARS	P12081	509 aa	Known RBP	13.78	□□□□□ -0.2
IFI35-208	ENST00000546325	BRCC3	P46736	316 aa		13.78	□□□□□ -0.2
IFI35-208	ENST00000546325	GPC5	P78333	572 aa		13.78	□□□□□ -0.2
IFI35-208	ENST00000546325	DMP1	Q13316	513 aa	Predicted RBP	13.78	□□□□□ -0.2
IFI35-208	ENST00000546325	RAB33A	Q14088	237 aa		13.78	□□□□□ -0.2
IFI35-208	ENST00000546325	ZSCAN23	Q3MJ62	389 aa		13.78	□□□□□ -0.2
IFI35-208	ENST00000546325	PABPC1L	Q4VXU2	614 aa	Known RBP	13.78	□□□□□ -0.2
IFI35-208	ENST00000546325	PHLDB3	Q6NSJ2	640 aa		13.78	□□□□□ -0.2
IFI35-208	ENST00000546325	CEP120	Q8N960	986 aa		13.78	□□□□□ -0.2
IFI35-208	ENST00000546325	KRI1	Q8N9T8	703 aa	Known RBP	13.78	□□□□□ -0.2
IFI35-208	ENST00000546325	DDX27	Q96GQ7	796 aa	Known RBP	13.78	□□□□□ -0.2
IFI35-208	ENST00000546325	SHD	Q96IW2	340 aa		13.78	□□□□□ -0.2
IFI35-208	ENST00000546325	UROC1	Q96N76	676 aa		13.78	□□□□□ -0.2
IFI35-208	ENST00000546325	KXD1	Q9BQD3	176 aa		13.78	□□□□□ -0.2
IFI35-208	ENST00000546325	CDT1	Q9H211	546 aa		13.78	□□□□□ -0.2
IFI35-208	ENST00000546325	TOPORS	Q9NS56	1045 aa	Predicted RBP	13.78	□□□□□ -0.2
IFI35-208	ENST00000546325	HOOK1	Q9UJC3	728 aa	Known RBP	13.78	□□□□□ -0.2
IFI35-208	ENST00000546325	TNFSF13B	Q9Y275	285 aa		13.78	□□□□□ -0.2
IFI35-208	ENST00000546325	PHLPP2	Q6ZVD8	1323 aa		13.78	□□□□□ -0.2
IFI35-208	ENST00000546325	COL4A3	Q01955	1670 aa		13.78	□□□□□ -0.2
IFI35-208	ENST00000546325	HIP1R	O75146	1068 aa		13.77	□□□□□ -0.21
IFI35-208	ENST00000546325	GADD45B	O75293	160 aa	Predicted RBP	13.77	□□□□□ -0.21
IFI35-208	ENST00000546325	GRM5	P41594	1212 aa		13.77	□□□□□ -0.21
IFI35-208	ENST00000546325	FAM160A1	Q05DH4	1040 aa		13.77	□□□□□ -0.21
IFI35-208	ENST00000546325	PTGDR	Q13258	359 aa		13.77	□□□□□ -0.21
IFI35-208	ENST00000546325	SNW1	Q13573	536 aa	Known RBP	13.77	□□□□□ -0.21
IFI35-208	ENST00000546325	ZRSR1	Q15695	479 aa	Known RBP	13.77	□□□□□ -0.21
IFI35-208	ENST00000546325	ARL6IP4	Q66PJ3	421 aa	Known RBP	13.77	□□□□□ -0.21
IFI35-208	ENST00000546325	RSPO2	Q6UXX9	243 aa	Predicted RBP	13.77	□□□□□ -0.21
IFI35-208	ENST00000546325	ANKS3	Q6ZW76	656 aa		13.77	□□□□□ -0.21
IFI35-208	ENST00000546325	NPAS3	Q8IXF0	933 aa		13.77	□□□□□ -0.21
IFI35-208	ENST00000546325	C4orf32	Q8N8J7	132 aa		13.77	□□□□□ -0.21
IFI35-208	ENST00000546325	C3orf58	Q8NDZ4	430 aa		13.77	□□□□□ -0.21
IFI35-208	ENST00000546325	PJA1	Q8NG27	643 aa		13.77	□□□□□ -0.21
IFI35-208	ENST00000546325	HINFP	Q9BQA5	517 aa		13.77	□□□□□ -0.21
IFI35-208	ENST00000546325	TCHP	Q9BT92	498 aa		13.77	□□□□□ -0.21
IFI35-208	ENST00000546325	TARS2	Q9BW92	718 aa	Known RBP	13.77	□□□□□ -0.21
IFI35-208	ENST00000546325	MRPL4	Q9BYD3	311 aa	Known RBP	13.77	□□□□□ -0.21
IFI35-208	ENST00000546325	GZF1	Q9H116	711 aa	Predicted RBP	13.77	□□□□□ -0.21
IFI35-208	ENST00000546325	NUP62CL	Q9H1M0	184 aa		13.77	□□□□□ -0.21
IFI35-208	ENST00000546325	KMT5A	Q9NQR1	393 aa		13.77	□□□□□ -0.21
IFI35-208	ENST00000546325	FAM13B	Q9NYF5	915 aa		13.77	□□□□□ -0.21
IFI35-208	ENST00000546325	DNMT3B	Q9UBC3	853 aa	Known RBP	13.77	□□□□□ -0.21
IFI35-208	ENST00000546325	PCDHA7	Q9UN72	937 aa		13.77	□□□□□ -0.21
IFI35-208	ENST00000546325	DNM3	Q9UQ16	869 aa		13.77	□□□□□ -0.21
IFI35-208	ENST00000546325	MRPS23	Q9Y3D9	190 aa	Known RBP	13.77	□□□□□ -0.21
IFI35-208	ENST00000546325	CLIC4	Q9Y696	253 aa		13.77	□□□□□ -0.21
IFI35-208	ENST00000546325	STK24	Q9Y6E0	443 aa		13.77	□□□□□ -0.21
IFI35-208	ENST00000546325	PATJ	Q8NI35	1801 aa		13.76	□□□□□ -0.21
IFI35-208	ENST00000546325	SMIM28	A0A1B0GU29	152 aa		13.76	□□□□□ -0.21
IFI35-208	ENST00000546325	PP2D1	A8MPX8	630 aa		13.76	□□□□□ -0.21
IFI35-208	ENST00000546325		E9PMD0	336 aa		13.76	□□□□□ -0.21
IFI35-208	ENST00000546325	PRRG1	O14668	218 aa		13.76	□□□□□ -0.21
IFI35-208	ENST00000546325	KIN	O60870	393 aa	Known RBP	13.76	□□□□□ -0.21
IFI35-208	ENST00000546325	LRRN2	O75325	713 aa		13.76	□□□□□ -0.21
IFI35-208	ENST00000546325	LMNA	P02545	664 aa	Known RBP	13.76	□□□□□ -0.21
IFI35-208	ENST00000546325	ELF1	P32519	619 aa		13.76	□□□□□ -0.21
IFI35-208	ENST00000546325	NPTX2	P47972	431 aa		13.76	□□□□□ -0.21
IFI35-208	ENST00000546325	ARPP19	P56211	112 aa		13.76	□□□□□ -0.21
IFI35-208	ENST00000546325	CEBPZ	Q03701	1054 aa	Known RBP	13.76	□□□□□ -0.21
IFI35-208	ENST00000546325	SOX4	Q06945	474 aa	Predicted RBP	13.76	□□□□□ -0.21
IFI35-208	ENST00000546325	UBXN2B	Q14CS0	331 aa		13.76	□□□□□ -0.21
IFI35-208	ENST00000546325	MLF2	Q15773	248 aa	Predicted RBP	13.76	□□□□□ -0.21
IFI35-208	ENST00000546325	UPP1	Q16831	310 aa		13.76	□□□□□ -0.21
IFI35-208	ENST00000546325	UVSSA	Q2YD98	709 aa		13.76	□□□□□ -0.21
IFI35-208	ENST00000546325	KRT79	Q5XKE5	535 aa		13.76	□□□□□ -0.21
IFI35-208	ENST00000546325	LRSAM1	Q6UWE0	723 aa		13.76	□□□□□ -0.21
IFI35-208	ENST00000546325	C1orf210	Q8IVY1	113 aa		13.76	□□□□□ -0.21
IFI35-208	ENST00000546325	ELOA2	Q8IYF1	753 aa	Predicted RBP	13.76	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms