RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 KIF22Q14807 665 aa12.89□□□□□ -0.35
NPC1L1-204ENST00000546276 STXBP2Q15833 593 aa12.89□□□□□ -0.35
NPC1L1-204ENST00000546276 PRPF38AQ8NAV1 312 aaKnown RBP12.89□□□□□ -0.35
NPC1L1-204ENST00000546276 DUSP9Q99956 384 aaKnown RBP12.89□□□□□ -0.35
NPC1L1-204ENST00000546276 ZNF200P98182 395 aaPredicted RBP12.89□□□□□ -0.35
NPC1L1-204ENST00000546276 TNFAIP2Q03169 654 aa12.89□□□□□ -0.35
NPC1L1-204ENST00000546276 KIF19Q2TAC6 998 aa12.89□□□□□ -0.35
NPC1L1-204ENST00000546276 MDH1BQ5I0G3 518 aa12.89□□□□□ -0.35
NPC1L1-204ENST00000546276 KIAA0895Q8NCT3 520 aa12.89□□□□□ -0.35
NPC1L1-204ENST00000546276 MTBPQ96DY7 904 aa12.89□□□□□ -0.35
NPC1L1-204ENST00000546276 PPP1R16BQ96T49 567 aa12.89□□□□□ -0.35
NPC1L1-204ENST00000546276 MRPL4Q9BYD3 311 aaKnown RBP12.89□□□□□ -0.35
NPC1L1-204ENST00000546276 ZNF408Q9H9D4 720 aa12.89□□□□□ -0.35
NPC1L1-204ENST00000546276 AGPAT3Q9NRZ7 376 aa12.89□□□□□ -0.35
NPC1L1-204ENST00000546276 RNF146Q9NTX7 359 aa12.89□□□□□ -0.35
NPC1L1-204ENST00000546276 GTSE1Q9NYZ3 720 aa12.89□□□□□ -0.35
NPC1L1-204ENST00000546276 CHORDC1Q9UHD1 332 aaPredicted RBP12.89□□□□□ -0.35
NPC1L1-204ENST00000546276 FAM153BP0C7A2 387 aa12.88□□□□□ -0.35
NPC1L1-204ENST00000546276 BMP6P22004 513 aa12.88□□□□□ -0.35
NPC1L1-204ENST00000546276 MORF4L2Q15014 288 aa12.88□□□□□ -0.35
NPC1L1-204ENST00000546276 DUOXA2Q1HG44 320 aa12.88□□□□□ -0.35
NPC1L1-204ENST00000546276 FAM153CQ494X1 144 aa12.88□□□□□ -0.35
NPC1L1-204ENST00000546276 CATSPER1Q8NEC5 780 aa12.88□□□□□ -0.35
NPC1L1-204ENST00000546276 PSPC1Q8WXF1 523 aaKnown RBP12.88□□□□□ -0.35
NPC1L1-204ENST00000546276 NSL1Q96IY1 281 aa12.88□□□□□ -0.35
NPC1L1-204ENST00000546276 TMEM8AQ9HCN3 771 aa12.88□□□□□ -0.35
NPC1L1-204ENST00000546276 GDF3Q9NR23 364 aa12.88□□□□□ -0.35
NPC1L1-204ENST00000546276 ADA2Q9NZK5 511 aa12.88□□□□□ -0.35
NPC1L1-204ENST00000546276 FAM153AQ9UHL3 310 aa12.88□□□□□ -0.35
NPC1L1-204ENST00000546276 ABL1P00519 1130 aa12.88□□□□□ -0.35
NPC1L1-204ENST00000546276 VHLP40337 213 aa12.88□□□□□ -0.35
NPC1L1-204ENST00000546276 DAB2IPQ5VWQ8 1189 aa12.88□□□□□ -0.35
NPC1L1-204ENST00000546276 CCNYL1Q8N7R7 359 aa12.88□□□□□ -0.35
NPC1L1-204ENST00000546276 DTNBP1Q96EV8 351 aa12.88□□□□□ -0.35
NPC1L1-204ENST00000546276 MAGEB18Q96M61 343 aa12.88□□□□□ -0.35
NPC1L1-204ENST00000546276 BFARQ9NZS9 450 aa12.88□□□□□ -0.35
NPC1L1-204ENST00000546276 XPO7Q9UIA9 1087 aaKnown RBP12.88□□□□□ -0.35
NPC1L1-204ENST00000546276 ANGPTL3Q9Y5C1 460 aa12.88□□□□□ -0.35
NPC1L1-204ENST00000546276 B2RBV5 119 aa12.88□□□□□ -0.35
NPC1L1-204ENST00000546276 SYF2O95926 243 aaKnown RBP12.88□□□□□ -0.35
NPC1L1-204ENST00000546276 RALAP11233 206 aa12.88□□□□□ -0.35
NPC1L1-204ENST00000546276 ADRA2BP18089 450 aa12.88□□□□□ -0.35
NPC1L1-204ENST00000546276 PAMP19021 973 aa12.88□□□□□ -0.35
NPC1L1-204ENST00000546276 TARSP26639 723 aaKnown RBP12.88□□□□□ -0.35
NPC1L1-204ENST00000546276 SNRPFP62306 86 aaKnown RBP12.88□□□□□ -0.35
NPC1L1-204ENST00000546276 STX3Q13277 289 aa12.88□□□□□ -0.35
NPC1L1-204ENST00000546276 PTK7Q13308 1070 aa12.88□□□□□ -0.35
NPC1L1-204ENST00000546276 PIGHQ14442 188 aaPredicted RBP12.88□□□□□ -0.35
NPC1L1-204ENST00000546276 RBBP8NLQ8NC74 664 aaPredicted RBP12.88□□□□□ -0.35
NPC1L1-204ENST00000546276 SHPRHQ149N8 1683 aa12.88□□□□□ -0.35
NPC1L1-204ENST00000546276 FOXN3O00409 490 aaPredicted RBP12.88□□□□□ -0.35
NPC1L1-204ENST00000546276 APOL1O14791 398 aa12.88□□□□□ -0.35
NPC1L1-204ENST00000546276 PJA2O43164 708 aa12.88□□□□□ -0.35
NPC1L1-204ENST00000546276 ECE2O60344 883 aa12.88□□□□□ -0.35
NPC1L1-204ENST00000546276 RPS6KA5O75582 802 aa12.88□□□□□ -0.35
NPC1L1-204ENST00000546276 CHEK2O96017 543 aa12.88□□□□□ -0.35
NPC1L1-204ENST00000546276 RANBP1P43487 201 aa12.88□□□□□ -0.35
NPC1L1-204ENST00000546276 PPP4CP60510 307 aa12.88□□□□□ -0.35
NPC1L1-204ENST00000546276 C3orf62Q6ZUJ4 267 aa12.88□□□□□ -0.35
NPC1L1-204ENST00000546276 MANSC1Q9H8J5 431 aa12.88□□□□□ -0.35
NPC1L1-204ENST00000546276 DLGAP2Q9P1A6 1054 aa12.88□□□□□ -0.35
NPC1L1-204ENST00000546276 WHRNQ9P202 907 aa12.88□□□□□ -0.35
NPC1L1-204ENST00000546276 HERC5Q9UII4 1024 aaKnown RBP12.88□□□□□ -0.35
NPC1L1-204ENST00000546276 A0A0U1RQJ8 604 aa12.87□□□□□ -0.35
NPC1L1-204ENST00000546276 SMAPO00193 183 aa12.87□□□□□ -0.35
NPC1L1-204ENST00000546276 CES2O00748 559 aa12.87□□□□□ -0.35
NPC1L1-204ENST00000546276 SPAG6O75602 509 aa12.87□□□□□ -0.35
NPC1L1-204ENST00000546276 ERVK-9P63128 1117 aa12.87□□□□□ -0.35
NPC1L1-204ENST00000546276 NKX1-1Q15270 411 aaPredicted RBP12.87□□□□□ -0.35
NPC1L1-204ENST00000546276 RYBPQ8N488 228 aaPredicted RBP12.87□□□□□ -0.35
NPC1L1-204ENST00000546276 TSEN2Q8NCE0 465 aaKnown RBP12.87□□□□□ -0.35
NPC1L1-204ENST00000546276 ARHGEF26Q96DR7 871 aa12.87□□□□□ -0.35
NPC1L1-204ENST00000546276 SH2D3AQ9BRG2 576 aa12.87□□□□□ -0.35
NPC1L1-204ENST00000546276 THTPAQ9BU02 230 aa12.87□□□□□ -0.35
NPC1L1-204ENST00000546276 AIPL1Q9NZN9 384 aa12.87□□□□□ -0.35
NPC1L1-204ENST00000546276 ZC3H7BQ9UGR2 993 aaKnown RBP12.87□□□□□ -0.35
NPC1L1-204ENST00000546276 PHTF1Q9UMS5 762 aa12.87□□□□□ -0.35
NPC1L1-204ENST00000546276 ZFXP17010 805 aaPredicted RBP12.87□□□□□ -0.35
NPC1L1-204ENST00000546276 ZNF844Q08AG5 666 aa12.87□□□□□ -0.35
NPC1L1-204ENST00000546276 SLC12A1Q13621 1099 aa12.87□□□□□ -0.35
NPC1L1-204ENST00000546276 PDCD2Q16342 344 aaPredicted RBP12.87□□□□□ -0.35
NPC1L1-204ENST00000546276 RC3H1Q5TC82 1133 aaKnown RBP12.87□□□□□ -0.35
NPC1L1-204ENST00000546276 ZNF677Q86XU0 584 aa12.87□□□□□ -0.35
NPC1L1-204ENST00000546276 MCEEQ96PE7 176 aa12.87□□□□□ -0.35
NPC1L1-204ENST00000546276 KLF6Q99612 283 aaPredicted RBP12.87□□□□□ -0.35
NPC1L1-204ENST00000546276 C2orf40Q9H1Z8 148 aa12.87□□□□□ -0.35
NPC1L1-204ENST00000546276 MED24O75448 989 aa12.87□□□□□ -0.35
NPC1L1-204ENST00000546276 ATP6V1G2O95670 118 aa12.87□□□□□ -0.35
NPC1L1-204ENST00000546276 PTENP60484 403 aa12.87□□□□□ -0.35
NPC1L1-204ENST00000546276 NFIXQ14938 502 aa12.87□□□□□ -0.35
NPC1L1-204ENST00000546276 SNRNP48Q6IEG0 339 aaKnown RBP12.87□□□□□ -0.35
NPC1L1-204ENST00000546276 LCA5Q86VQ0 697 aa12.87□□□□□ -0.35
NPC1L1-204ENST00000546276 TTC39CQ8N584 583 aa12.87□□□□□ -0.35
NPC1L1-204ENST00000546276 TBC1D16Q8TBP0 767 aa12.87□□□□□ -0.35
NPC1L1-204ENST00000546276 SCFD1Q8WVM8 642 aa12.87□□□□□ -0.35
NPC1L1-204ENST00000546276 SCG3Q8WXD2 468 aaKnown RBP12.87□□□□□ -0.35
NPC1L1-204ENST00000546276 RUSC1Q9BVN2 902 aa12.87□□□□□ -0.35
NPC1L1-204ENST00000546276 MARCOQ9UEW3 520 aaPredicted RBP12.87□□□□□ -0.35
NPC1L1-204ENST00000546276 CHMP2BQ9UQN3 213 aa12.87□□□□□ -0.35
NPC1L1-204ENST00000546276 GPR75-ASB3A0A0A6YYF3 556 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms