RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 ITGA8P53708 1063 aa10.4□□□□□ -0.74
TRAF1-203ENST00000546084 CDH8P55286 799 aa10.4□□□□□ -0.74
TRAF1-203ENST00000546084 OVGP1Q12889 678 aa10.4□□□□□ -0.74
TRAF1-203ENST00000546084 P3H1Q32P28 736 aa10.4□□□□□ -0.74
TRAF1-203ENST00000546084 PREPLQ4J6C6 727 aaPredicted RBP10.4□□□□□ -0.74
TRAF1-203ENST00000546084 UBAP2Q5T6F2 1119 aaKnown RBP10.4□□□□□ -0.74
TRAF1-203ENST00000546084 IZUMO3Q5VZ72 239 aa10.4□□□□□ -0.74
TRAF1-203ENST00000546084 C1orf228Q6PIY5 440 aa10.4□□□□□ -0.74
TRAF1-203ENST00000546084 FMNL3Q8IVF7 1028 aa10.4□□□□□ -0.74
TRAF1-203ENST00000546084 UBA3Q8TBC4 463 aa10.4□□□□□ -0.74
TRAF1-203ENST00000546084 HSD17B14Q9BPX1 270 aa10.4□□□□□ -0.74
TRAF1-203ENST00000546084 FAM167BQ9BTA0 163 aa10.4□□□□□ -0.74
TRAF1-203ENST00000546084 TRIM6Q9C030 488 aaPredicted RBP10.4□□□□□ -0.74
TRAF1-203ENST00000546084 STMN4Q9H169 189 aaPredicted RBP10.4□□□□□ -0.74
TRAF1-203ENST00000546084 HACL1Q9UJ83 578 aa10.4□□□□□ -0.74
TRAF1-203ENST00000546084 TBX20Q9UMR3 447 aa10.4□□□□□ -0.74
TRAF1-203ENST00000546084 SLIT2O94813 1529 aa10.4□□□□□ -0.75
TRAF1-203ENST00000546084 H0YGN5 161 aa10.4□□□□□ -0.75
TRAF1-203ENST00000546084 O00370 1275 aa10.4□□□□□ -0.75
TRAF1-203ENST00000546084 PSAPP07602 524 aa10.4□□□□□ -0.75
TRAF1-203ENST00000546084 RARAP10276 462 aa10.4□□□□□ -0.75
TRAF1-203ENST00000546084 HIRAP54198 1017 aaPredicted RBP10.4□□□□□ -0.75
TRAF1-203ENST00000546084 ZRSR2Q15696 482 aaKnown RBP10.4□□□□□ -0.75
TRAF1-203ENST00000546084 EML3Q32P44 896 aa10.4□□□□□ -0.75
TRAF1-203ENST00000546084 ZBTB41Q5SVQ8 909 aa10.4□□□□□ -0.75
TRAF1-203ENST00000546084 C6orf89Q6UWU4 347 aa10.4□□□□□ -0.75
TRAF1-203ENST00000546084 MOB2Q70IA6 237 aa10.4□□□□□ -0.75
TRAF1-203ENST00000546084 LRRC57Q8N9N7 239 aa10.4□□□□□ -0.75
TRAF1-203ENST00000546084 C1orf131Q8NDD1 294 aaKnown RBP10.4□□□□□ -0.75
TRAF1-203ENST00000546084 HIPK4Q8NE63 616 aa10.4□□□□□ -0.75
TRAF1-203ENST00000546084 AGR3Q8TD06 166 aa10.4□□□□□ -0.75
TRAF1-203ENST00000546084 IWS1Q96ST2 819 aa10.4□□□□□ -0.75
TRAF1-203ENST00000546084 PCDHB18PQ96TA0 734 aa10.4□□□□□ -0.75
TRAF1-203ENST00000546084 PABPC3Q9H361 631 aaKnown RBP10.4□□□□□ -0.75
TRAF1-203ENST00000546084 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.4□□□□□ -0.75
TRAF1-203ENST00000546084 TRAF3IP3Q9Y228 551 aa10.4□□□□□ -0.75
TRAF1-203ENST00000546084 INPP5FQ9Y2H2 1132 aa10.4□□□□□ -0.75
TRAF1-203ENST00000546084 NFS1Q9Y697 457 aa10.4□□□□□ -0.75
TRAF1-203ENST00000546084 NUP98P52948 1817 aa10.39□□□□□ -0.75
TRAF1-203ENST00000546084 DRD4P21917 467 aa10.39□□□□□ -0.75
TRAF1-203ENST00000546084 PSMA2P25787 234 aa10.39□□□□□ -0.75
TRAF1-203ENST00000546084 SMARCA1P28370 1054 aa10.39□□□□□ -0.75
TRAF1-203ENST00000546084 ARSEP51690 589 aa10.39□□□□□ -0.75
TRAF1-203ENST00000546084 DALRD3Q5D0E6 543 aaKnown RBP10.39□□□□□ -0.75
TRAF1-203ENST00000546084 IL31Q6EBC2 164 aa10.39□□□□□ -0.75
TRAF1-203ENST00000546084 TRPM8Q7Z2W7 1104 aa10.39□□□□□ -0.75
TRAF1-203ENST00000546084 TTC17Q96AE7 1141 aa10.39□□□□□ -0.75
TRAF1-203ENST00000546084 VTI1AQ96AJ9 217 aa10.39□□□□□ -0.75
TRAF1-203ENST00000546084 STAMBPL1Q96FJ0 436 aa10.39□□□□□ -0.75
TRAF1-203ENST00000546084 POLR3CQ9BUI4 534 aaPredicted RBP10.39□□□□□ -0.75
TRAF1-203ENST00000546084 FAM129AQ9BZQ8 928 aa10.39□□□□□ -0.75
TRAF1-203ENST00000546084 GGA3Q9NZ52 723 aa10.39□□□□□ -0.75
TRAF1-203ENST00000546084 SLC9A2Q9UBY0 812 aa10.39□□□□□ -0.75
TRAF1-203ENST00000546084 MARCOQ9UEW3 520 aaPredicted RBP10.39□□□□□ -0.75
TRAF1-203ENST00000546084 VAV3Q9UKW4 847 aa10.39□□□□□ -0.75
TRAF1-203ENST00000546084 ZNRF3Q9ULT6 936 aa10.39□□□□□ -0.75
TRAF1-203ENST00000546084 ATXN2Q99700 1313 aaKnown RBP10.39□□□□□ -0.75
TRAF1-203ENST00000546084 ALS2Q96Q42 1657 aa10.39□□□□□ -0.75
TRAF1-203ENST00000546084 TMEM120BA0PK00 339 aa10.39□□□□□ -0.75
TRAF1-203ENST00000546084 PSMD10O75832 226 aa10.39□□□□□ -0.75
TRAF1-203ENST00000546084 TMEM253P0C7T8 217 aa10.39□□□□□ -0.75
TRAF1-203ENST00000546084 GTF2H1P32780 548 aa10.39□□□□□ -0.75
TRAF1-203ENST00000546084 NLRP11P59045 1033 aaKnown RBP10.39□□□□□ -0.75
TRAF1-203ENST00000546084 SETDB1Q15047 1291 aa10.39□□□□□ -0.75
TRAF1-203ENST00000546084 C6orf118Q5T5N4 469 aa10.39□□□□□ -0.75
TRAF1-203ENST00000546084 ERICH1Q86X53 443 aa10.39□□□□□ -0.75
TRAF1-203ENST00000546084 NSUN6Q8TEA1 469 aaKnown RBP10.39□□□□□ -0.75
TRAF1-203ENST00000546084 NSMCE1Q8WV22 266 aa10.39□□□□□ -0.75
TRAF1-203ENST00000546084 MTMR12Q9C0I1 747 aa10.39□□□□□ -0.75
TRAF1-203ENST00000546084 C12orf65Q9H3J6 166 aaKnown RBP10.39□□□□□ -0.75
TRAF1-203ENST00000546084 DONSONQ9NYP3 566 aa10.39□□□□□ -0.75
TRAF1-203ENST00000546084 TMEM59LQ9UK28 342 aa10.39□□□□□ -0.75
TRAF1-203ENST00000546084 CSADQ9Y600 493 aa10.39□□□□□ -0.75
TRAF1-203ENST00000546084 COL18A1P39060 1754 aa10.39□□□□□ -0.75
TRAF1-203ENST00000546084 RTN2O75298 545 aa10.38□□□□□ -0.75
TRAF1-203ENST00000546084 CSPG5O95196 566 aa10.38□□□□□ -0.75
TRAF1-203ENST00000546084 GGPS1O95749 300 aa10.38□□□□□ -0.75
TRAF1-203ENST00000546084 SNHG28P0DPA3 235 aa10.38□□□□□ -0.75
TRAF1-203ENST00000546084 MAN1A1P33908 653 aa10.38□□□□□ -0.75
TRAF1-203ENST00000546084 PDIA2Q13087 525 aaKnown RBP10.38□□□□□ -0.75
TRAF1-203ENST00000546084 MAPK7Q13164 816 aa10.38□□□□□ -0.75
TRAF1-203ENST00000546084 DNAJC3Q13217 504 aa10.38□□□□□ -0.75
TRAF1-203ENST00000546084 GLRA4Q5JXX5 417 aa10.38□□□□□ -0.75
TRAF1-203ENST00000546084 KCTD6Q8NC69 237 aa10.38□□□□□ -0.75
TRAF1-203ENST00000546084 SLC17A8Q8NDX2 589 aa10.38□□□□□ -0.75
TRAF1-203ENST00000546084 LENG9Q96B70 501 aa10.38□□□□□ -0.75
TRAF1-203ENST00000546084 TMEM121Q9BTD3 319 aa10.38□□□□□ -0.75
TRAF1-203ENST00000546084 SLC13A1Q9BZW2 595 aa10.38□□□□□ -0.75
TRAF1-203ENST00000546084 ATP6V0A4Q9HBG4 840 aa10.38□□□□□ -0.75
TRAF1-203ENST00000546084 FAM49BQ9NUQ9 324 aa10.38□□□□□ -0.75
TRAF1-203ENST00000546084 KLHL14Q9P2G3 628 aa10.38□□□□□ -0.75
TRAF1-203ENST00000546084 CICQ96RK0 1608 aaPredicted RBP10.38□□□□□ -0.75
TRAF1-203ENST00000546084 SYNGAP1Q96PV0 1343 aa10.38□□□□□ -0.75
TRAF1-203ENST00000546084 PAX7P23759 505 aa10.38□□□□□ -0.75
TRAF1-203ENST00000546084 CLCN3P51790 818 aa10.38□□□□□ -0.75
TRAF1-203ENST00000546084 KRT81Q14533 505 aa10.38□□□□□ -0.75
TRAF1-203ENST00000546084 PPP2R5EQ16537 467 aa10.38□□□□□ -0.75
TRAF1-203ENST00000546084 ZNF568Q3ZCX4 644 aa10.38□□□□□ -0.75
TRAF1-203ENST00000546084 ACCSLQ4AC99 568 aa10.38□□□□□ -0.75
TRAF1-203ENST00000546084 ERMARDQ5T6L9 678 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms