RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 PODXLO00592 558 aa22.19■■□□□ 1.14
HMGA2-211ENST00000545998 KIF4AO95239 1232 aa22.19■■□□□ 1.14
HMGA2-211ENST00000545998 IGFBP6P24592 240 aaPredicted RBP22.19■■□□□ 1.14
HMGA2-211ENST00000545998 LRPAP1P30533 357 aa22.19■■□□□ 1.14
HMGA2-211ENST00000545998 GUCY2FP51841 1108 aa22.19■■□□□ 1.14
HMGA2-211ENST00000545998 PSMD6Q15008 389 aa22.19■■□□□ 1.14
HMGA2-211ENST00000545998 SURF1Q15526 300 aa22.19■■□□□ 1.14
HMGA2-211ENST00000545998 DCLRE1AQ6PJP8 1040 aa22.19■■□□□ 1.14
HMGA2-211ENST00000545998 DDX53Q86TM3 631 aaKnown RBP22.19■■□□□ 1.14
HMGA2-211ENST00000545998 ZC3H3Q8IXZ2 948 aaKnown RBP22.19■■□□□ 1.14
HMGA2-211ENST00000545998 BEST2Q8NFU1 509 aa22.19■■□□□ 1.14
HMGA2-211ENST00000545998 NELFBQ8WX92 580 aa22.19■■□□□ 1.14
HMGA2-211ENST00000545998 PUF60Q9UHX1 559 aaKnown RBP22.19■■□□□ 1.14
HMGA2-211ENST00000545998 ADAM28Q9UKQ2 775 aa22.19■■□□□ 1.14
HMGA2-211ENST00000545998 FRMD4BQ9Y2L6 1034 aa22.19■■□□□ 1.14
HMGA2-211ENST00000545998 TMEM189-UBE2V1I3L0A0 370 aa22.18■■□□□ 1.14
HMGA2-211ENST00000545998 AKAP3O75969 853 aa22.18■■□□□ 1.14
HMGA2-211ENST00000545998 PTPROQ16827 1216 aa22.18■■□□□ 1.14
HMGA2-211ENST00000545998 KLHL40Q2TBA0 621 aa22.18■■□□□ 1.14
HMGA2-211ENST00000545998 CEP135Q66GS9 1140 aa22.18■■□□□ 1.14
HMGA2-211ENST00000545998 FOXR2Q6PJQ5 311 aa22.18■■□□□ 1.14
HMGA2-211ENST00000545998 CD300LGQ6UXG3 332 aa22.18■■□□□ 1.14
HMGA2-211ENST00000545998 MLKLQ8NB16 471 aa22.18■■□□□ 1.14
HMGA2-211ENST00000545998 C3orf58Q8NDZ4 430 aa22.18■■□□□ 1.14
HMGA2-211ENST00000545998 MRPL38Q96DV4 380 aaKnown RBP22.18■■□□□ 1.14
HMGA2-211ENST00000545998 GZF1Q9H116 711 aaPredicted RBP22.18■■□□□ 1.14
HMGA2-211ENST00000545998 CTNND2Q9UQB3 1225 aa22.18■■□□□ 1.14
HMGA2-211ENST00000545998 MTCH2Q9Y6C9 303 aa22.18■■□□□ 1.14
HMGA2-211ENST00000545998 PTPRJQ12913 1337 aa22.18■■□□□ 1.14
HMGA2-211ENST00000545998 SCN1AP35498 2009 aa22.18■■□□□ 1.14
HMGA2-211ENST00000545998 MAPK13O15264 365 aa22.17■■□□□ 1.14
HMGA2-211ENST00000545998 B3GAT3O94766 335 aa22.17■■□□□ 1.14
HMGA2-211ENST00000545998 NLRP12P59046 1061 aa22.17■■□□□ 1.14
HMGA2-211ENST00000545998 PAK1Q13153 545 aa22.17■■□□□ 1.14
HMGA2-211ENST00000545998 TTI2Q6NXR4 508 aa22.17■■□□□ 1.14
HMGA2-211ENST00000545998 RNF168Q8IYW5 571 aaPredicted RBP22.17■■□□□ 1.14
HMGA2-211ENST00000545998 HASPINQ8TF76 798 aa22.17■■□□□ 1.14
HMGA2-211ENST00000545998 DUSP9Q99956 384 aaKnown RBP22.17■■□□□ 1.14
HMGA2-211ENST00000545998 TLR9Q9NR96 1032 aa22.17■■□□□ 1.14
HMGA2-211ENST00000545998 STK39Q9UEW8 545 aa22.17■■□□□ 1.14
HMGA2-211ENST00000545998 TULP1O00294 542 aaPredicted RBP22.16■■□□□ 1.14
HMGA2-211ENST00000545998 CETN3O15182 167 aa22.16■■□□□ 1.14
HMGA2-211ENST00000545998 TADA2AO75478 443 aa22.16■■□□□ 1.14
HMGA2-211ENST00000545998 IGFBP4P22692 258 aa22.16■■□□□ 1.14
HMGA2-211ENST00000545998 ERVFC1P60507 584 aa22.16■■□□□ 1.14
HMGA2-211ENST00000545998 TFAMQ00059 246 aaKnown RBP22.16■■□□□ 1.14
HMGA2-211ENST00000545998 FKBP3Q00688 224 aaKnown RBP22.16■■□□□ 1.14
HMGA2-211ENST00000545998 DPCR1Q3MIW9 517 aa22.16■■□□□ 1.14
HMGA2-211ENST00000545998 CAVIN1Q6NZI2 390 aaKnown RBP22.16■■□□□ 1.14
HMGA2-211ENST00000545998 FUT10Q6P4F1 479 aa22.16■■□□□ 1.14
HMGA2-211ENST00000545998 PLEKHO2Q8TD55 490 aa22.16■■□□□ 1.14
HMGA2-211ENST00000545998 CACTINQ8WUQ7 758 aaKnown RBP22.16■■□□□ 1.14
HMGA2-211ENST00000545998 CCDC127Q96BQ5 260 aa22.16■■□□□ 1.14
HMGA2-211ENST00000545998 EEF2KMTQ96G04 330 aa22.16■■□□□ 1.14
HMGA2-211ENST00000545998 INTS13Q9NVM9 706 aa22.16■■□□□ 1.14
HMGA2-211ENST00000545998 DPP3Q9NY33 737 aa22.16■■□□□ 1.14
HMGA2-211ENST00000545998 VWA8A3KMH1 1905 aa22.16■■□□□ 1.14
HMGA2-211ENST00000545998 BICDL2A1A5D9 508 aa22.16■■□□□ 1.14
HMGA2-211ENST00000545998 FSCN2O14926 492 aa22.16■■□□□ 1.14
HMGA2-211ENST00000545998 DLATP10515 647 aaKnown RBP22.16■■□□□ 1.14
HMGA2-211ENST00000545998 FOSL2P15408 326 aa22.16■■□□□ 1.14
HMGA2-211ENST00000545998 IRS1P35568 1242 aa22.16■■□□□ 1.14
HMGA2-211ENST00000545998 PSMC2P35998 433 aaKnown RBP22.16■■□□□ 1.14
HMGA2-211ENST00000545998 LMBRD2Q68DH5 695 aaPredicted RBP22.16■■□□□ 1.14
HMGA2-211ENST00000545998 WDR49Q8IV35 697 aa22.16■■□□□ 1.14
HMGA2-211ENST00000545998 VPS52Q8N1B4 723 aa22.16■■□□□ 1.14
HMGA2-211ENST00000545998 OR5B17Q8NGF7 314 aa22.16■■□□□ 1.14
HMGA2-211ENST00000545998 PARD3BQ8TEW8 1205 aa22.16■■□□□ 1.14
HMGA2-211ENST00000545998 FAM84AQ96KN4 292 aa22.16■■□□□ 1.14
HMGA2-211ENST00000545998 FNBP1Q96RU3 617 aa22.16■■□□□ 1.14
HMGA2-211ENST00000545998 POP1Q99575 1024 aaKnown RBP22.16■■□□□ 1.14
HMGA2-211ENST00000545998 CGRRF1Q99675 332 aa22.16■■□□□ 1.14
HMGA2-211ENST00000545998 GPR62Q9BZJ7 368 aa22.16■■□□□ 1.14
HMGA2-211ENST00000545998 ZBP1Q9H171 429 aa22.16■■□□□ 1.14
HMGA2-211ENST00000545998 ANO9A1A5B4 782 aa22.15■■□□□ 1.14
HMGA2-211ENST00000545998 CSPG5O95196 566 aa22.15■■□□□ 1.14
HMGA2-211ENST00000545998 SOD2P04179 222 aa22.15■■□□□ 1.14
HMGA2-211ENST00000545998 STX17P56962 302 aa22.15■■□□□ 1.14
HMGA2-211ENST00000545998 C9orf57Q5W0N0 161 aa22.15■■□□□ 1.14
HMGA2-211ENST00000545998 TAS1R1Q7RTX1 841 aa22.15■■□□□ 1.14
HMGA2-211ENST00000545998 FAM186BQ8IYM0 893 aa22.15■■□□□ 1.14
HMGA2-211ENST00000545998 C1orf127Q8N9H9 656 aa22.15■■□□□ 1.14
HMGA2-211ENST00000545998 SYAP1Q96A49 352 aaPredicted RBP22.15■■□□□ 1.14
HMGA2-211ENST00000545998 MKNK1Q9BUB5 465 aa22.15■■□□□ 1.14
HMGA2-211ENST00000545998 MTMR12Q9C0I1 747 aa22.15■■□□□ 1.14
HMGA2-211ENST00000545998 RWDD2AQ9UIY3 292 aa22.15■■□□□ 1.14
HMGA2-211ENST00000545998 SF3B1O75533 1304 aaKnown RBP eCLIP22.15■■□□□ 1.14
HMGA2-211ENST00000545998 PIRO00625 290 aa22.14■■□□□ 1.13
HMGA2-211ENST00000545998 PPEF2O14830 753 aa22.14■■□□□ 1.13
HMGA2-211ENST00000545998 CLDN10P78369 228 aa22.14■■□□□ 1.13
HMGA2-211ENST00000545998 DUOXA2Q1HG44 320 aa22.14■■□□□ 1.13
HMGA2-211ENST00000545998 CXorf38Q8TB03 319 aa22.14■■□□□ 1.13
HMGA2-211ENST00000545998 BORCS6Q96GS4 357 aa22.14■■□□□ 1.13
HMGA2-211ENST00000545998 ANKRD36BP1Q96IX9 119 aa22.14■■□□□ 1.13
HMGA2-211ENST00000545998 TCF25Q9BQ70 676 aa22.14■■□□□ 1.13
HMGA2-211ENST00000545998 HERC2P3Q9BVR0 1158 aa22.14■■□□□ 1.13
HMGA2-211ENST00000545998 LRRIQ3A6PVS8 624 aaPredicted RBP22.13■■□□□ 1.13
HMGA2-211ENST00000545998 TMEM191BP0C7N4 346 aa22.13■■□□□ 1.13
HMGA2-211ENST00000545998 MCCD1P59942 119 aaPredicted RBP22.13■■□□□ 1.13
HMGA2-211ENST00000545998 PDE12Q6L8Q7 609 aaKnown RBP22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms