RNA–Protein interactions for RNA: ENST00000545046.5

CHFR-224, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,186 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-224ENST00000545046 MTMR12Q9C0I1 747 aa17.81■□□□□ 0.44
CHFR-224ENST00000545046 MINDY3Q9H8M7 445 aa17.81■□□□□ 0.44
CHFR-224ENST00000545046 A0A087WZ62 844 aa17.8■□□□□ 0.44
CHFR-224ENST00000545046 TMEM110-MUSTN1A8MSY1 372 aa17.8■□□□□ 0.44
CHFR-224ENST00000545046 CCDC188H7C350 402 aa17.8■□□□□ 0.44
CHFR-224ENST00000545046 ATMINO43313 823 aaPredicted RBP17.8■□□□□ 0.44
CHFR-224ENST00000545046 CST3P01034 146 aaPredicted RBP17.8■□□□□ 0.44
CHFR-224ENST00000545046 CALCAP01258 141 aa17.8■□□□□ 0.44
CHFR-224ENST00000545046 TMEM191BP0C7N4 346 aa17.8■□□□□ 0.44
CHFR-224ENST00000545046 MESDQ14696 234 aa17.8■□□□□ 0.44
CHFR-224ENST00000545046 CLUL1Q15846 466 aa17.8■□□□□ 0.44
CHFR-224ENST00000545046 DGKDQ16760 1214 aa17.8■□□□□ 0.44
CHFR-224ENST00000545046 FAM187BQ17R55 369 aa17.8■□□□□ 0.44
CHFR-224ENST00000545046 SGSM1Q2NKQ1 1148 aa17.8■□□□□ 0.44
CHFR-224ENST00000545046 CST9Q5W186 159 aa17.8■□□□□ 0.44
CHFR-224ENST00000545046 EEF1DP3Q658K8 133 aa17.8■□□□□ 0.44
CHFR-224ENST00000545046 KLHL7Q8IXQ5 586 aa17.8■□□□□ 0.44
CHFR-224ENST00000545046 LINC01465Q8N7H1 131 aa17.8■□□□□ 0.44
CHFR-224ENST00000545046 TRIM11Q96F44 468 aa17.8■□□□□ 0.44
CHFR-224ENST00000545046 ANKRD36BP1Q96IX9 119 aa17.8■□□□□ 0.44
CHFR-224ENST00000545046 FDXACB1Q9BRP7 624 aaPredicted RBP17.8■□□□□ 0.44
CHFR-224ENST00000545046 CARD9Q9H257 536 aa17.8■□□□□ 0.44
CHFR-224ENST00000545046 IFT122Q9HBG6 1241 aa17.8■□□□□ 0.44
CHFR-224ENST00000545046 CPA4Q9UI42 421 aa17.8■□□□□ 0.44
CHFR-224ENST00000545046 ZNF236Q9UL36 1845 aa17.8■□□□□ 0.44
CHFR-224ENST00000545046 TRPM7Q96QT4 1865 aa17.8■□□□□ 0.44
CHFR-224ENST00000545046 KRIT1O00522 736 aa17.8■□□□□ 0.44
CHFR-224ENST00000545046 IL18RAPO95256 599 aa17.8■□□□□ 0.44
CHFR-224ENST00000545046 TNNC2P02585 160 aa17.8■□□□□ 0.44
CHFR-224ENST00000545046 MMP3P08254 477 aa17.8■□□□□ 0.44
CHFR-224ENST00000545046 UNGP13051 313 aaPredicted RBP17.8■□□□□ 0.44
CHFR-224ENST00000545046 OSTNP61366 133 aa17.8■□□□□ 0.44
CHFR-224ENST00000545046 TNFAIP2Q03169 654 aa17.8■□□□□ 0.44
CHFR-224ENST00000545046 IFNLR1Q8IU57 520 aaPredicted RBP17.8■□□□□ 0.44
CHFR-224ENST00000545046 NAP1L3Q99457 506 aaPredicted RBP17.8■□□□□ 0.44
CHFR-224ENST00000545046 CDT1Q9H211 546 aa17.8■□□□□ 0.44
CHFR-224ENST00000545046 RPF1Q9H9Y2 349 aaKnown RBP17.8■□□□□ 0.44
CHFR-224ENST00000545046 CNOT8Q9UFF9 292 aaKnown RBP17.8■□□□□ 0.44
CHFR-224ENST00000545046 TTC7AQ9ULT0 858 aaPredicted RBP17.8■□□□□ 0.44
CHFR-224ENST00000545046 CNTN6Q9UQ52 1028 aa17.8■□□□□ 0.44
CHFR-224ENST00000545046 ZEB2O60315 1214 aa17.79■□□□□ 0.44
CHFR-224ENST00000545046 ASS1P00966 412 aaKnown RBP17.79■□□□□ 0.44
CHFR-224ENST00000545046 MYBL2P10244 700 aa17.79■□□□□ 0.44
CHFR-224ENST00000545046 TNFRSF8P28908 595 aa17.79■□□□□ 0.44
CHFR-224ENST00000545046 GNA15P30679 374 aa17.79■□□□□ 0.44
CHFR-224ENST00000545046 TFAMQ00059 246 aaKnown RBP17.79■□□□□ 0.44
CHFR-224ENST00000545046 PPFIA1Q13136 1202 aa17.79■□□□□ 0.44
CHFR-224ENST00000545046 TRIM72Q6ZMU5 477 aa17.79■□□□□ 0.44
CHFR-224ENST00000545046 CDR2LQ86X02 465 aaPredicted RBP17.79■□□□□ 0.44
CHFR-224ENST00000545046 RBBP8NLQ8NC74 664 aaPredicted RBP17.79■□□□□ 0.44
CHFR-224ENST00000545046 CHORDC1Q9UHD1 332 aaPredicted RBP17.79■□□□□ 0.44
CHFR-224ENST00000545046 UMODL1Q5DID0 1318 aa17.79■□□□□ 0.44
CHFR-224ENST00000545046 MGAMO43451 1857 aa17.79■□□□□ 0.44
CHFR-224ENST00000545046 B4GALT4O60513 344 aa17.79■□□□□ 0.44
CHFR-224ENST00000545046 HEXIM1O94992 359 aaKnown RBP17.79■□□□□ 0.44
CHFR-224ENST00000545046 VTNP04004 478 aa17.79■□□□□ 0.44
CHFR-224ENST00000545046 HOXC6P09630 235 aa17.79■□□□□ 0.44
CHFR-224ENST00000545046 IQCF3P0C7M6 154 aa17.79■□□□□ 0.44
CHFR-224ENST00000545046 MYBL1P10243 752 aa17.79■□□□□ 0.44
CHFR-224ENST00000545046 NSFP46459 744 aaKnown RBP17.79■□□□□ 0.44
CHFR-224ENST00000545046 MYL6P60660 151 aa17.79■□□□□ 0.44
CHFR-224ENST00000545046 GRIK4Q16099 956 aa17.79■□□□□ 0.44
CHFR-224ENST00000545046 GLIPR1L2Q4G1C9 344 aa17.79■□□□□ 0.44
CHFR-224ENST00000545046 AP1M1Q9BXS5 423 aa17.79■□□□□ 0.44
CHFR-224ENST00000545046 UBXN6Q9BZV1 441 aa17.79■□□□□ 0.44
CHFR-224ENST00000545046 WNT8AQ9H1J5 351 aa17.79■□□□□ 0.44
CHFR-224ENST00000545046 VIPAS39Q9H9C1 493 aa17.79■□□□□ 0.44
CHFR-224ENST00000545046 MCF2P10911 925 aa17.78■□□□□ 0.44
CHFR-224ENST00000545046 HOXD8P13378 290 aaPredicted RBP17.78■□□□□ 0.44
CHFR-224ENST00000545046 COMTP21964 271 aa17.78■□□□□ 0.44
CHFR-224ENST00000545046 EPHB4P54760 987 aa17.78■□□□□ 0.44
CHFR-224ENST00000545046 GSPT2Q8IYD1 628 aaKnown RBP17.78■□□□□ 0.44
CHFR-224ENST00000545046 MCOLN2Q8IZK6 566 aa17.78■□□□□ 0.44
CHFR-224ENST00000545046 AENQ8WTP8 325 aaKnown RBP17.78■□□□□ 0.44
CHFR-224ENST00000545046 NLRP7Q8WX94 980 aa17.78■□□□□ 0.44
CHFR-224ENST00000545046 CPA5Q8WXQ8 436 aa17.78■□□□□ 0.44
CHFR-224ENST00000545046 PPP1R16BQ96T49 567 aa17.78■□□□□ 0.44
CHFR-224ENST00000545046 EPB41L5Q9HCM4 733 aa17.78■□□□□ 0.44
CHFR-224ENST00000545046 THAP12O43422 761 aa17.77■□□□□ 0.44
CHFR-224ENST00000545046 FGGP02679 453 aa17.77■□□□□ 0.44
CHFR-224ENST00000545046 CYP1A1P04798 512 aaPredicted RBP17.77■□□□□ 0.44
CHFR-224ENST00000545046 GLI1P08151 1106 aa17.77■□□□□ 0.44
CHFR-224ENST00000545046 ZNF157P51786 506 aaPredicted RBP17.77■□□□□ 0.44
CHFR-224ENST00000545046 GUCY2DQ02846 1103 aa17.77■□□□□ 0.44
CHFR-224ENST00000545046 PPP1R2P3Q6NXS1 205 aa17.77■□□□□ 0.44
CHFR-224ENST00000545046 CYFIP2Q96F07 1278 aa17.77■□□□□ 0.44
CHFR-224ENST00000545046 RNPC3Q96LT9 517 aaKnown RBP17.77■□□□□ 0.44
CHFR-224ENST00000545046 SCLT1Q96NL6 688 aa17.77■□□□□ 0.44
CHFR-224ENST00000545046 GDF3Q9NR23 364 aa17.77■□□□□ 0.44
CHFR-224ENST00000545046 MANSC4A6NHS7 340 aaPredicted RBP17.77■□□□□ 0.43
CHFR-224ENST00000545046 SPOPO43791 374 aa17.77■□□□□ 0.43
CHFR-224ENST00000545046 CSDE1O75534 798 aaKnown RBP17.77■□□□□ 0.43
CHFR-224ENST00000545046 CENPCQ03188 943 aa17.77■□□□□ 0.43
CHFR-224ENST00000545046 MAP2K5Q13163 448 aa17.77■□□□□ 0.43
CHFR-224ENST00000545046 DCAF12L1Q5VU92 463 aa17.77■□□□□ 0.43
CHFR-224ENST00000545046 NAA35Q5VZE5 725 aa17.77■□□□□ 0.43
CHFR-224ENST00000545046 CEP120Q8N960 986 aa17.77■□□□□ 0.43
CHFR-224ENST00000545046 ZSWIM1Q9BR11 485 aa17.77■□□□□ 0.43
CHFR-224ENST00000545046 NIF3L1Q9GZT8 377 aa17.77■□□□□ 0.43
CHFR-224ENST00000545046 AVENQ9NQS1 362 aaPredicted RBP17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms