RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 SCYL3Q8IZE3 742 aa13.89□□□□□ -0.19
CPSF7-223ENST00000544669 ZNF280CQ8ND82 737 aa13.89□□□□□ -0.19
CPSF7-223ENST00000544669 DNERQ8NFT8 737 aa13.89□□□□□ -0.19
CPSF7-223ENST00000544669 ZNF317Q96PQ6 595 aaPredicted RBP13.89□□□□□ -0.19
CPSF7-223ENST00000544669 FAM213AQ9BRX8 229 aa13.89□□□□□ -0.19
CPSF7-223ENST00000544669 ZNF518BQ9C0D4 1074 aa13.89□□□□□ -0.19
CPSF7-223ENST00000544669 ACAD9Q9H845 621 aa13.89□□□□□ -0.19
CPSF7-223ENST00000544669 HOXC10Q9NYD6 342 aa13.89□□□□□ -0.19
CPSF7-223ENST00000544669 ANAPC5Q9UJX4 755 aa13.89□□□□□ -0.19
CPSF7-223ENST00000544669 AGO2Q9UKV8 859 aaKnown RBP13.89□□□□□ -0.19
CPSF7-223ENST00000544669 ADAMTS5Q9UNA0 930 aa13.89□□□□□ -0.19
CPSF7-223ENST00000544669 CLDN3O15551 220 aa13.88□□□□□ -0.19
CPSF7-223ENST00000544669 DNAJC8O75937 253 aaPredicted RBP13.88□□□□□ -0.19
CPSF7-223ENST00000544669 LSM8O95777 96 aaKnown RBP13.88□□□□□ -0.19
CPSF7-223ENST00000544669 C4BPAP04003 597 aaKnown RBP13.88□□□□□ -0.19
CPSF7-223ENST00000544669 SHBGP04278 402 aa13.88□□□□□ -0.19
CPSF7-223ENST00000544669 DSG3P32926 999 aa13.88□□□□□ -0.19
CPSF7-223ENST00000544669 ICAM3P32942 547 aa13.88□□□□□ -0.19
CPSF7-223ENST00000544669 COPB2P35606 906 aa13.88□□□□□ -0.19
CPSF7-223ENST00000544669 PIK3CAP42336 1068 aa13.88□□□□□ -0.19
CPSF7-223ENST00000544669 POLGP54098 1239 aaPredicted RBP13.88□□□□□ -0.19
CPSF7-223ENST00000544669 MCL1Q07820 350 aa13.88□□□□□ -0.19
CPSF7-223ENST00000544669 MTMR2Q13614 643 aa13.88□□□□□ -0.19
CPSF7-223ENST00000544669 AUHQ13825 339 aaKnown RBP13.88□□□□□ -0.19
CPSF7-223ENST00000544669 ZNF568Q3ZCX4 644 aa13.88□□□□□ -0.19
CPSF7-223ENST00000544669 DRICH1Q6PGQ1 229 aaPredicted RBP13.88□□□□□ -0.19
CPSF7-223ENST00000544669 ABHD15Q6UXT9 468 aa13.88□□□□□ -0.19
CPSF7-223ENST00000544669 ARHGEF18Q6ZSZ5 1173 aa13.88□□□□□ -0.19
CPSF7-223ENST00000544669 CCDC13Q8IYE1 715 aa13.88□□□□□ -0.19
CPSF7-223ENST00000544669 ABRAQ8N0Z2 381 aa13.88□□□□□ -0.19
CPSF7-223ENST00000544669 DEPTORQ8TB45 409 aa13.88□□□□□ -0.19
CPSF7-223ENST00000544669 MAGEC3Q8TD91 643 aa13.88□□□□□ -0.19
CPSF7-223ENST00000544669 ATXN2LQ8WWM7 1075 aaKnown RBP13.88□□□□□ -0.19
CPSF7-223ENST00000544669 SLC7A3Q8WY07 619 aa13.88□□□□□ -0.19
CPSF7-223ENST00000544669 GRAMD1AQ96CP6 724 aa13.88□□□□□ -0.19
CPSF7-223ENST00000544669 TEPSINQ96N21 525 aa13.88□□□□□ -0.19
CPSF7-223ENST00000544669 TTC25Q96NG3 672 aa13.88□□□□□ -0.19
CPSF7-223ENST00000544669 TEX13BQ9BXU2 312 aa13.88□□□□□ -0.19
CPSF7-223ENST00000544669 FRMD8P1Q9BZ68 369 aaPredicted RBP13.88□□□□□ -0.19
CPSF7-223ENST00000544669 DCLK3Q9C098 648 aa13.88□□□□□ -0.19
CPSF7-223ENST00000544669 POLR3FQ9H1D9 316 aaPredicted RBP13.88□□□□□ -0.19
CPSF7-223ENST00000544669 NRBP2Q9NSY0 501 aa13.88□□□□□ -0.19
CPSF7-223ENST00000544669 SEPT9Q9UHD8 586 aaPredicted RBP13.88□□□□□ -0.19
CPSF7-223ENST00000544669 PTPN22Q9Y2R2 807 aa13.88□□□□□ -0.19
CPSF7-223ENST00000544669 CFAP73A6NFT4 308 aa13.87□□□□□ -0.19
CPSF7-223ENST00000544669 CCT8L1PA6NM43 557 aa13.87□□□□□ -0.19
CPSF7-223ENST00000544669 K7ERI5 159 aa13.87□□□□□ -0.19
CPSF7-223ENST00000544669 CHUKO15111 745 aa13.87□□□□□ -0.19
CPSF7-223ENST00000544669 STBD1O95210 358 aa13.87□□□□□ -0.19
CPSF7-223ENST00000544669 CALB1P05937 261 aa13.87□□□□□ -0.19
CPSF7-223ENST00000544669 ABHD2P08910 425 aa13.87□□□□□ -0.19
CPSF7-223ENST00000544669 SUPT20HL2P0C7V6 817 aa13.87□□□□□ -0.19
CPSF7-223ENST00000544669 RXRBP28702 533 aa13.87□□□□□ -0.19
CPSF7-223ENST00000544669 ADCY8P40145 1251 aa13.87□□□□□ -0.19
CPSF7-223ENST00000544669 MNAT1P51948 309 aa13.87□□□□□ -0.19
CPSF7-223ENST00000544669 GTF2A1P52655 376 aaPredicted RBP13.87□□□□□ -0.19
CPSF7-223ENST00000544669 EFNA5P52803 228 aa13.87□□□□□ -0.19
CPSF7-223ENST00000544669 ACTR2P61160 394 aa13.87□□□□□ -0.19
CPSF7-223ENST00000544669 TGFB2P61812 414 aa13.87□□□□□ -0.19
CPSF7-223ENST00000544669 YWHAEP62258 255 aaKnown RBP13.87□□□□□ -0.19
CPSF7-223ENST00000544669 PRKCEQ02156 737 aa13.87□□□□□ -0.19
CPSF7-223ENST00000544669 CUL2Q13617 745 aa13.87□□□□□ -0.19
CPSF7-223ENST00000544669 SUPT20HL1Q3ZLR7 823 aa13.87□□□□□ -0.19
CPSF7-223ENST00000544669 ANKRD20A8PQ5CZ79 823 aa13.87□□□□□ -0.19
CPSF7-223ENST00000544669 SLC39A4Q6P5W5 647 aa13.87□□□□□ -0.19
CPSF7-223ENST00000544669 RHBDF2Q6PJF5 856 aa13.87□□□□□ -0.19
CPSF7-223ENST00000544669 PPP1R21Q6ZMI0 780 aa13.87□□□□□ -0.19
CPSF7-223ENST00000544669 DYDC1Q8WWB3 177 aa13.87□□□□□ -0.19
CPSF7-223ENST00000544669 ADAM22Q9P0K1 906 aa13.87□□□□□ -0.19
CPSF7-223ENST00000544669 ZNF112Q9UJU3 913 aa13.87□□□□□ -0.19
CPSF7-223ENST00000544669 CDH16O75309 829 aa13.87□□□□□ -0.19
CPSF7-223ENST00000544669 TJP3O95049 919 aa13.87□□□□□ -0.19
CPSF7-223ENST00000544669 HLA-DRAP01903 254 aa13.87□□□□□ -0.19
CPSF7-223ENST00000544669 STXBP2Q15833 593 aa13.87□□□□□ -0.19
CPSF7-223ENST00000544669 SNRNP48Q6IEG0 339 aaKnown RBP13.87□□□□□ -0.19
CPSF7-223ENST00000544669 PLEKHA7Q6IQ23 1121 aa13.87□□□□□ -0.19
CPSF7-223ENST00000544669 ZPBP2Q6X784 338 aa13.87□□□□□ -0.19
CPSF7-223ENST00000544669 MON1BQ7L1V2 547 aa13.87□□□□□ -0.19
CPSF7-223ENST00000544669 ANKRD35Q8N283 1001 aa13.87□□□□□ -0.19
CPSF7-223ENST00000544669 CHST13Q8NET6 341 aa13.87□□□□□ -0.19
CPSF7-223ENST00000544669 CCT6BQ92526 530 aa13.87□□□□□ -0.19
CPSF7-223ENST00000544669 FAXDC2Q96IV6 333 aa13.87□□□□□ -0.19
CPSF7-223ENST00000544669 CFAP57Q96MR6 1250 aa13.87□□□□□ -0.19
CPSF7-223ENST00000544669 POP1Q99575 1024 aaKnown RBP13.87□□□□□ -0.19
CPSF7-223ENST00000544669 CGRRF1Q99675 332 aa13.87□□□□□ -0.19
CPSF7-223ENST00000544669 NIFKQ9BYG3 293 aaKnown RBP13.87□□□□□ -0.19
CPSF7-223ENST00000544669 PORCNQ9H237 461 aa13.87□□□□□ -0.19
CPSF7-223ENST00000544669 CDC42EP4Q9H3Q1 356 aaKnown RBP13.87□□□□□ -0.19
CPSF7-223ENST00000544669 UBN1Q9NPG3 1134 aa13.87□□□□□ -0.19
CPSF7-223ENST00000544669 KLC4Q9NSK0 619 aa13.87□□□□□ -0.19
CPSF7-223ENST00000544669 DDX56Q9NY93 547 aaKnown RBP13.87□□□□□ -0.19
CPSF7-223ENST00000544669 PIM2Q9P1W9 311 aa13.87□□□□□ -0.19
CPSF7-223ENST00000544669 A0A1B0GUA9 196 aa13.86□□□□□ -0.19
CPSF7-223ENST00000544669 SMAPO00193 183 aa13.86□□□□□ -0.19
CPSF7-223ENST00000544669 O00370 1275 aa13.86□□□□□ -0.19
CPSF7-223ENST00000544669 ATMINO43313 823 aaPredicted RBP13.86□□□□□ -0.19
CPSF7-223ENST00000544669 GAS2O43903 313 aaKnown RBP13.86□□□□□ -0.19
CPSF7-223ENST00000544669 ATG7O95352 703 aa13.86□□□□□ -0.19
CPSF7-223ENST00000544669 RRM1P23921 792 aa13.86□□□□□ -0.19
CPSF7-223ENST00000544669 XRCC4Q13426 336 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms