RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 CPSF3Q9UKF6 684 aaKnown RBP10.3□□□□□ -0.76
YBX3-215ENST00000544504 MTUS1Q9ULD2 1270 aa10.3□□□□□ -0.76
YBX3-215ENST00000544504 PADI3Q9ULW8 664 aa10.3□□□□□ -0.76
YBX3-215ENST00000544504 COL4A4P53420 1690 aaPredicted RBP10.3□□□□□ -0.76
YBX3-215ENST00000544504 ITIH6Q6UXX5 1313 aa10.3□□□□□ -0.76
YBX3-215ENST00000544504 C19orf67A6NJJ6 358 aa10.29□□□□□ -0.76
YBX3-215ENST00000544504 TTLL13PA6NNM8 815 aa10.29□□□□□ -0.76
YBX3-215ENST00000544504 AP5Z1O43299 807 aa10.29□□□□□ -0.76
YBX3-215ENST00000544504 XPOTO43592 962 aaKnown RBP10.29□□□□□ -0.76
YBX3-215ENST00000544504 FAM189A1O60320 539 aa10.29□□□□□ -0.76
YBX3-215ENST00000544504 NPTXRO95502 500 aa10.29□□□□□ -0.76
YBX3-215ENST00000544504 ADRB2P07550 413 aa10.29□□□□□ -0.76
YBX3-215ENST00000544504 TNNI1P19237 187 aa10.29□□□□□ -0.76
YBX3-215ENST00000544504 FGFR4P22455 802 aa10.29□□□□□ -0.76
YBX3-215ENST00000544504 FMO5P49326 533 aa10.29□□□□□ -0.76
YBX3-215ENST00000544504 GSDMDP57764 484 aa10.29□□□□□ -0.76
YBX3-215ENST00000544504 CLDN10P78369 228 aa10.29□□□□□ -0.76
YBX3-215ENST00000544504 MYL7Q01449 175 aa10.29□□□□□ -0.76
YBX3-215ENST00000544504 CRELD2Q6UXH1 353 aaPredicted RBP10.29□□□□□ -0.76
YBX3-215ENST00000544504 PPFIBP1Q86W92 1011 aa10.29□□□□□ -0.76
YBX3-215ENST00000544504 WDR49Q8IV35 697 aa10.29□□□□□ -0.76
YBX3-215ENST00000544504 FMNL3Q8IVF7 1028 aa10.29□□□□□ -0.76
YBX3-215ENST00000544504 VSTM4Q8IW00 320 aa10.29□□□□□ -0.76
YBX3-215ENST00000544504 ADHFE1Q8IWW8 467 aa10.29□□□□□ -0.76
YBX3-215ENST00000544504 RSPH1Q8WYR4 309 aa10.29□□□□□ -0.76
YBX3-215ENST00000544504 SEPT8Q92599 483 aa10.29□□□□□ -0.76
YBX3-215ENST00000544504 CCDC127Q96BQ5 260 aa10.29□□□□□ -0.76
YBX3-215ENST00000544504 PGBD4Q96DM1 585 aa10.29□□□□□ -0.76
YBX3-215ENST00000544504 PDLIM2Q96JY6 352 aa10.29□□□□□ -0.76
YBX3-215ENST00000544504 PCMTD1Q96MG8 357 aaPredicted RBP10.29□□□□□ -0.76
YBX3-215ENST00000544504 CGRRF1Q99675 332 aa10.29□□□□□ -0.76
YBX3-215ENST00000544504 IFIH1Q9BYX4 1025 aaKnown RBP10.29□□□□□ -0.76
YBX3-215ENST00000544504 HAPLN2Q9GZV7 340 aa10.29□□□□□ -0.76
YBX3-215ENST00000544504 TMEM8AQ9HCN3 771 aa10.29□□□□□ -0.76
YBX3-215ENST00000544504 UBN1Q9NPG3 1134 aa10.29□□□□□ -0.76
YBX3-215ENST00000544504 C1orf112Q9NSG2 853 aa10.29□□□□□ -0.76
YBX3-215ENST00000544504 USP20Q9Y2K6 914 aa10.29□□□□□ -0.76
YBX3-215ENST00000544504 DERAQ9Y315 318 aa10.29□□□□□ -0.76
YBX3-215ENST00000544504 DCHS1Q96JQ0 3298 aa10.29□□□□□ -0.76
YBX3-215ENST00000544504 LINC01553A4QN01 128 aa10.28□□□□□ -0.76
YBX3-215ENST00000544504 H3BQ06 376 aaPredicted RBP10.28□□□□□ -0.76
YBX3-215ENST00000544504 NRDCO43847 1150 aa10.28□□□□□ -0.76
YBX3-215ENST00000544504 ZNF623O75123 536 aa10.28□□□□□ -0.76
YBX3-215ENST00000544504 GJB5O95377 273 aa10.28□□□□□ -0.76
YBX3-215ENST00000544504 TNNC2P02585 160 aa10.28□□□□□ -0.76
YBX3-215ENST00000544504 PTMAP06454 111 aaKnown RBP10.28□□□□□ -0.76
YBX3-215ENST00000544504 DLATP10515 647 aaKnown RBP10.28□□□□□ -0.76
YBX3-215ENST00000544504 RFX1P22670 979 aa10.28□□□□□ -0.76
YBX3-215ENST00000544504 CD52P31358 61 aa10.28□□□□□ -0.76
YBX3-215ENST00000544504 MXI1P50539 228 aa10.28□□□□□ -0.76
YBX3-215ENST00000544504 ENOX2Q16206 610 aaKnown RBP10.28□□□□□ -0.76
YBX3-215ENST00000544504 PTPROQ16827 1216 aa10.28□□□□□ -0.76
YBX3-215ENST00000544504 EXOC3L4Q17RC7 722 aa10.28□□□□□ -0.76
YBX3-215ENST00000544504 DUOXA2Q1HG44 320 aa10.28□□□□□ -0.76
YBX3-215ENST00000544504 FIGNQ5HY92 759 aa10.28□□□□□ -0.76
YBX3-215ENST00000544504 KRT39Q6A163 491 aa10.28□□□□□ -0.76
YBX3-215ENST00000544504 SMYD5Q6GMV2 418 aa10.28□□□□□ -0.76
YBX3-215ENST00000544504 TRAF7Q6Q0C0 670 aa10.28□□□□□ -0.76
YBX3-215ENST00000544504 CCDC150Q8NCX0 1101 aa10.28□□□□□ -0.76
YBX3-215ENST00000544504 PRSS33Q8NF86 280 aa10.28□□□□□ -0.76
YBX3-215ENST00000544504 NEK11Q8NG66 645 aa10.28□□□□□ -0.76
YBX3-215ENST00000544504 MRPL38Q96DV4 380 aaKnown RBP10.28□□□□□ -0.76
YBX3-215ENST00000544504 ANKRD36BP1Q96IX9 119 aa10.28□□□□□ -0.76
YBX3-215ENST00000544504 FAM81BQ96LP2 452 aa10.28□□□□□ -0.76
YBX3-215ENST00000544504 PPP1R9BQ96SB3 815 aa10.28□□□□□ -0.76
YBX3-215ENST00000544504 EDEM3Q9BZQ6 932 aa10.28□□□□□ -0.76
YBX3-215ENST00000544504 AGO3Q9H9G7 860 aaKnown RBP10.28□□□□□ -0.76
YBX3-215ENST00000544504 FAM105AQ9NUU6 356 aa10.28□□□□□ -0.76
YBX3-215ENST00000544504 R3HCC1Q9Y3T6 440 aaKnown RBP10.28□□□□□ -0.76
YBX3-215ENST00000544504 C2CD2Q9Y426 696 aa10.28□□□□□ -0.76
YBX3-215ENST00000544504 A0A0U1RQF3 1178 aa10.27□□□□□ -0.77
YBX3-215ENST00000544504 TTC26A0AVF1 554 aa10.27□□□□□ -0.77
YBX3-215ENST00000544504 LRRIQ3A6PVS8 624 aaPredicted RBP10.27□□□□□ -0.77
YBX3-215ENST00000544504 TEX33O43247 280 aa10.27□□□□□ -0.77
YBX3-215ENST00000544504 EFCAB14O75071 495 aa10.27□□□□□ -0.77
YBX3-215ENST00000544504 ZC3H11AO75152 810 aaKnown RBP eCLIP10.27□□□□□ -0.77
YBX3-215ENST00000544504 PHACTR2O75167 634 aa10.27□□□□□ -0.77
YBX3-215ENST00000544504 EOMESO95936 686 aa10.27□□□□□ -0.77
YBX3-215ENST00000544504 TMEM191BP0C7N4 346 aa10.27□□□□□ -0.77
YBX3-215ENST00000544504 TRIM49P0CI25 452 aa10.27□□□□□ -0.77
YBX3-215ENST00000544504 TRIM49CP0CI26 452 aa10.27□□□□□ -0.77
YBX3-215ENST00000544504 ITGA4P13612 1032 aa10.27□□□□□ -0.77
YBX3-215ENST00000544504 TRIM21P19474 475 aaKnown RBP10.27□□□□□ -0.77
YBX3-215ENST00000544504 PBX1P40424 430 aa10.27□□□□□ -0.77
YBX3-215ENST00000544504 DSC3Q14574 896 aa10.27□□□□□ -0.77
YBX3-215ENST00000544504 SYCP1Q15431 976 aa10.27□□□□□ -0.77
YBX3-215ENST00000544504 TIGD5Q53EQ6 642 aa10.27□□□□□ -0.77
YBX3-215ENST00000544504 PLEKHG4Q58EX7 1191 aa10.27□□□□□ -0.77
YBX3-215ENST00000544504 UBXN11Q5T124 520 aa10.27□□□□□ -0.77
YBX3-215ENST00000544504 SLC24A5Q71RS6 500 aa10.27□□□□□ -0.77
YBX3-215ENST00000544504 TMC6Q7Z403 805 aa10.27□□□□□ -0.77
YBX3-215ENST00000544504 BMP8AQ7Z5Y6 402 aa10.27□□□□□ -0.77
YBX3-215ENST00000544504 TMCO2Q7Z6W1 182 aaPredicted RBP10.27□□□□□ -0.77
YBX3-215ENST00000544504 MRPL10Q7Z7H8 261 aaKnown RBP10.27□□□□□ -0.77
YBX3-215ENST00000544504 CDR2LQ86X02 465 aaPredicted RBP10.27□□□□□ -0.77
YBX3-215ENST00000544504 FBXL13Q8NEE6 735 aa10.27□□□□□ -0.77
YBX3-215ENST00000544504 ZNF397Q8NF99 534 aaPredicted RBP10.27□□□□□ -0.77
YBX3-215ENST00000544504 PABPC5Q96DU9 382 aaKnown RBP10.27□□□□□ -0.77
YBX3-215ENST00000544504 POP1Q99575 1024 aaKnown RBP10.27□□□□□ -0.77
YBX3-215ENST00000544504 ADAM2Q99965 735 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms