RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 MKNK1Q9BUB5 465 aa16.04■□□□□ 0.16
CHFR-223ENST00000544268 ISCUQ9H1K1 167 aa16.04■□□□□ 0.16
CHFR-223ENST00000544268 SUCLA2Q9P2R7 463 aaPredicted RBP16.04■□□□□ 0.16
CHFR-223ENST00000544268 MYH9P35579 1960 aaKnown RBP16.04■□□□□ 0.16
CHFR-223ENST00000544268 EME2A4GXA9 379 aaPredicted RBP16.04■□□□□ 0.16
CHFR-223ENST00000544268 DCDC2CA8MYV0 355 aa16.04■□□□□ 0.16
CHFR-223ENST00000544268 ATG7O95352 703 aa16.04■□□□□ 0.16
CHFR-223ENST00000544268 GGPS1O95749 300 aa16.04■□□□□ 0.16
CHFR-223ENST00000544268 PRKCEQ02156 737 aa16.04■□□□□ 0.16
CHFR-223ENST00000544268 ZNF792Q3KQV3 632 aa16.04■□□□□ 0.16
CHFR-223ENST00000544268 ACCSLQ4AC99 568 aa16.04■□□□□ 0.16
CHFR-223ENST00000544268 CTNNBL1Q8WYA6 563 aaPredicted RBP16.04■□□□□ 0.16
CHFR-223ENST00000544268 RFFLQ8WZ73 363 aa16.04■□□□□ 0.16
CHFR-223ENST00000544268 SEMA4DQ92854 862 aa16.04■□□□□ 0.16
CHFR-223ENST00000544268 NOD2Q9HC29 1040 aa16.04■□□□□ 0.16
CHFR-223ENST00000544268 HSPBP1Q9NZL4 362 aa16.04■□□□□ 0.16
CHFR-223ENST00000544268 SEL1LQ9UBV2 794 aa16.04■□□□□ 0.16
CHFR-223ENST00000544268 IVNS1ABPQ9Y6Y0 642 aa16.04■□□□□ 0.16
CHFR-223ENST00000544268 PLXNA1Q9UIW2 1896 aa16.03■□□□□ 0.16
CHFR-223ENST00000544268 TRAPPC3O43617 180 aa16.03■□□□□ 0.16
CHFR-223ENST00000544268 ADSSP30520 456 aa16.03■□□□□ 0.16
CHFR-223ENST00000544268 VAMP7P51809 220 aa16.03■□□□□ 0.16
CHFR-223ENST00000544268 ELF3P78545 371 aaPredicted RBP16.03■□□□□ 0.16
CHFR-223ENST00000544268 SLMAPQ14BN4 828 aa16.03■□□□□ 0.16
CHFR-223ENST00000544268 NFIL3Q16649 462 aa16.03■□□□□ 0.16
CHFR-223ENST00000544268 GPR142Q7Z601 462 aa16.03■□□□□ 0.16
CHFR-223ENST00000544268 ZDHHC14Q8IZN3 488 aa16.03■□□□□ 0.16
CHFR-223ENST00000544268 SEC16BQ96JE7 1060 aa16.03■□□□□ 0.16
CHFR-223ENST00000544268 KDM4CQ9H3R0 1056 aa16.03■□□□□ 0.16
CHFR-223ENST00000544268 CPA4Q9UI42 421 aa16.03■□□□□ 0.16
CHFR-223ENST00000544268 AMFRQ9UKV5 643 aa16.03■□□□□ 0.16
CHFR-223ENST00000544268 GSTTP1A0A1W2PQM5 241 aa16.03■□□□□ 0.16
CHFR-223ENST00000544268 C5orf60A6NFR6 353 aa16.03■□□□□ 0.16
CHFR-223ENST00000544268 MANSC4A6NHS7 340 aaPredicted RBP16.03■□□□□ 0.16
CHFR-223ENST00000544268 STRNO43815 780 aa16.03■□□□□ 0.16
CHFR-223ENST00000544268 FTLP02792 175 aaPredicted RBP16.03■□□□□ 0.16
CHFR-223ENST00000544268 TMEM63BQ5T3F8 832 aa16.03■□□□□ 0.16
CHFR-223ENST00000544268 FAM102BQ5T8I3 360 aa16.03■□□□□ 0.16
CHFR-223ENST00000544268 ARMCX2Q7L311 632 aa16.03■□□□□ 0.16
CHFR-223ENST00000544268 HAUS6Q7Z4H7 955 aa16.03■□□□□ 0.16
CHFR-223ENST00000544268 SLC47A2Q86VL8 602 aa16.03■□□□□ 0.16
CHFR-223ENST00000544268 RPUSD2Q8IZ73 545 aaKnown RBP16.03■□□□□ 0.16
CHFR-223ENST00000544268 RASGEF1CQ8N431 466 aa16.03■□□□□ 0.16
CHFR-223ENST00000544268 MICAL1Q8TDZ2 1067 aa16.03■□□□□ 0.16
CHFR-223ENST00000544268 NSMCE1Q8WV22 266 aa16.03■□□□□ 0.16
CHFR-223ENST00000544268 CEP170P1Q96L14 293 aa16.03■□□□□ 0.16
CHFR-223ENST00000544268 AGPAT1Q99943 283 aa16.03■□□□□ 0.16
CHFR-223ENST00000544268 PDGFCQ9NRA1 345 aa16.03■□□□□ 0.16
CHFR-223ENST00000544268 IRAK4Q9NWZ3 460 aa16.03■□□□□ 0.16
CHFR-223ENST00000544268 ASB14A6NK59 587 aa16.02■□□□□ 0.16
CHFR-223ENST00000544268 TMEM253P0C7T8 217 aa16.02■□□□□ 0.16
CHFR-223ENST00000544268 ATP4AP20648 1035 aa16.02■□□□□ 0.16
CHFR-223ENST00000544268 RBBP5Q15291 538 aaKnown RBP16.02■□□□□ 0.16
CHFR-223ENST00000544268 IFI16Q16666 785 aaKnown RBP16.02■□□□□ 0.16
CHFR-223ENST00000544268 METTL7BQ6UX53 244 aa16.02■□□□□ 0.16
CHFR-223ENST00000544268 OTUD6AQ7L8S5 288 aa16.02■□□□□ 0.16
CHFR-223ENST00000544268 CACNA2D3Q8IZS8 1091 aa16.02■□□□□ 0.16
CHFR-223ENST00000544268 ABRAQ8N0Z2 381 aa16.02■□□□□ 0.16
CHFR-223ENST00000544268 DHX38Q92620 1227 aaKnown RBP16.02■□□□□ 0.16
CHFR-223ENST00000544268 KREMEN1Q96MU8 473 aa16.02■□□□□ 0.16
CHFR-223ENST00000544268 TMEM117Q9H0C3 514 aa16.02■□□□□ 0.16
CHFR-223ENST00000544268 ZNF302Q9NR11 478 aa16.02■□□□□ 0.16
CHFR-223ENST00000544268 SEPT9Q9UHD8 586 aaPredicted RBP16.02■□□□□ 0.16
CHFR-223ENST00000544268 MAFBQ9Y5Q3 323 aaPredicted RBP16.02■□□□□ 0.16
CHFR-223ENST00000544268 A0A0A6YYK5 440 aaPredicted RBP16.02■□□□□ 0.15
CHFR-223ENST00000544268 TCRBV7S2A1N4TA0A589 114 aa16.02■□□□□ 0.15
CHFR-223ENST00000544268 H0YGN5 161 aa16.02■□□□□ 0.15
CHFR-223ENST00000544268 CYP26A1O43174 497 aa16.02■□□□□ 0.15
CHFR-223ENST00000544268 DKC1O60832 514 aaKnown RBP eCLIP16.02■□□□□ 0.15
CHFR-223ENST00000544268 SLC10A3P09131 477 aa16.02■□□□□ 0.15
CHFR-223ENST00000544268 HSPA9P38646 679 aaKnown RBP16.02■□□□□ 0.15
CHFR-223ENST00000544268 EPC2Q52LR7 807 aa16.02■□□□□ 0.15
CHFR-223ENST00000544268 CCDC62Q6P9F0 684 aa16.02■□□□□ 0.15
CHFR-223ENST00000544268 PHLDB2Q86SQ0 1253 aa16.02■□□□□ 0.15
CHFR-223ENST00000544268 NOP9Q86U38 636 aaKnown RBP16.02■□□□□ 0.15
CHFR-223ENST00000544268 UBLCP1Q8WVY7 318 aaPredicted RBP16.02■□□□□ 0.15
CHFR-223ENST00000544268 BSNDQ8WZ55 320 aa16.02■□□□□ 0.15
CHFR-223ENST00000544268 PCYT2Q99447 389 aa16.02■□□□□ 0.15
CHFR-223ENST00000544268 TMBIM4Q9HC24 238 aa16.02■□□□□ 0.15
CHFR-223ENST00000544268 NFS1Q9Y697 457 aa16.02■□□□□ 0.15
CHFR-223ENST00000544268 NCANO14594 1321 aa16.01■□□□□ 0.15
CHFR-223ENST00000544268 IGKV6D-21A0A0A0MT36 114 aa16.01■□□□□ 0.15
CHFR-223ENST00000544268 CCDC169A6NNP5 214 aa16.01■□□□□ 0.15
CHFR-223ENST00000544268 PLS3P13797 630 aa16.01■□□□□ 0.15
CHFR-223ENST00000544268 CHRNB2P17787 502 aa16.01■□□□□ 0.15
CHFR-223ENST00000544268 POU5F1Q01860 360 aaKnown RBP16.01■□□□□ 0.15
CHFR-223ENST00000544268 BZW1Q7L1Q6 419 aaKnown RBP16.01■□□□□ 0.15
CHFR-223ENST00000544268 CCT6BQ92526 530 aa16.01■□□□□ 0.15
CHFR-223ENST00000544268 COPS5Q92905 334 aa16.01■□□□□ 0.15
CHFR-223ENST00000544268 HVCN1Q96D96 273 aa16.01■□□□□ 0.15
CHFR-223ENST00000544268 LARSQ9P2J5 1176 aaKnown RBP16.01■□□□□ 0.15
CHFR-223ENST00000544268 TRPC6Q9Y210 931 aa16.01■□□□□ 0.15
CHFR-223ENST00000544268 ALG6Q9Y672 507 aa16.01■□□□□ 0.15
CHFR-223ENST00000544268 ADGRA2Q96PE1 1338 aa16.01■□□□□ 0.15
CHFR-223ENST00000544268 CES2O00748 559 aa16■□□□□ 0.15
CHFR-223ENST00000544268 SNUPNO95149 360 aaKnown RBP16■□□□□ 0.15
CHFR-223ENST00000544268 KRT13P13646 458 aa16■□□□□ 0.15
CHFR-223ENST00000544268 RIPK1Q13546 671 aa16■□□□□ 0.15
CHFR-223ENST00000544268 GRB14Q14449 540 aa16■□□□□ 0.15
CHFR-223ENST00000544268 KIF22Q14807 665 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms