RNA–Protein interactions for RNA: ENST00000543988.1

OTUB1-212, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 1 (best) BASIC

Gene OTUB1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-212ENST00000543988 PCIF1Q9H4Z3 704 aa23.68■■□□□ 1.38
OTUB1-212ENST00000543988 UBQLN1Q9UMX0 589 aaKnown RBP23.68■■□□□ 1.38
OTUB1-212ENST00000543988 HCFC2Q9Y5Z7 792 aa23.68■■□□□ 1.38
OTUB1-212ENST00000543988 GOLGA8IPA6NC78 632 aa23.67■■□□□ 1.38
OTUB1-212ENST00000543988 GOLGA8JA6NMD2 632 aa23.67■■□□□ 1.38
OTUB1-212ENST00000543988 I3L4J1 428 aa23.67■■□□□ 1.38
OTUB1-212ENST00000543988 TGFB1I1O43294 461 aa23.67■■□□□ 1.38
OTUB1-212ENST00000543988 BMP1P13497 986 aa23.67■■□□□ 1.38
OTUB1-212ENST00000543988 RPL9P32969 192 aaKnown RBP23.67■■□□□ 1.38
OTUB1-212ENST00000543988 ELAVL2Q12926 359 aaKnown RBP23.67■■□□□ 1.38
OTUB1-212ENST00000543988 SNW1Q13573 536 aaKnown RBP23.67■■□□□ 1.38
OTUB1-212ENST00000543988 CD302Q8IX05 232 aa23.67■■□□□ 1.38
OTUB1-212ENST00000543988 EMILIN2Q9BXX0 1053 aa23.67■■□□□ 1.38
OTUB1-212ENST00000543988 AGPAT3Q9NRZ7 376 aa23.67■■□□□ 1.38
OTUB1-212ENST00000543988 TEX28O15482 410 aa23.66■■□□□ 1.38
OTUB1-212ENST00000543988 EXTL3O43909 919 aa23.66■■□□□ 1.38
OTUB1-212ENST00000543988 BRCC3P46736 316 aa23.66■■□□□ 1.38
OTUB1-212ENST00000543988 WNT7BP56706 349 aa23.66■■□□□ 1.38
OTUB1-212ENST00000543988 POU5F1Q01860 360 aaKnown RBP23.66■■□□□ 1.38
OTUB1-212ENST00000543988 TMEM132DQ14C87 1099 aa23.66■■□□□ 1.38
OTUB1-212ENST00000543988 PTCRAQ6ISU1 281 aaPredicted RBP23.66■■□□□ 1.38
OTUB1-212ENST00000543988 TMEM184AQ6ZMB5 413 aa23.66■■□□□ 1.38
OTUB1-212ENST00000543988 BRSK2Q8IWQ3 736 aa23.66■■□□□ 1.38
OTUB1-212ENST00000543988 TSPAN18Q96SJ8 248 aa23.66■■□□□ 1.38
OTUB1-212ENST00000543988 TTPALQ9BTX7 342 aa23.66■■□□□ 1.38
OTUB1-212ENST00000543988 ASB7Q9H672 318 aa23.66■■□□□ 1.38
OTUB1-212ENST00000543988 RXFP1Q9HBX9 757 aa23.66■■□□□ 1.38
OTUB1-212ENST00000543988 CD207Q9UJ71 328 aa23.66■■□□□ 1.38
OTUB1-212ENST00000543988 SSX2IPQ9Y2D8 614 aa23.66■■□□□ 1.38
OTUB1-212ENST00000543988 GADD45BO75293 160 aaPredicted RBP23.65■■□□□ 1.38
OTUB1-212ENST00000543988 SRGAP2BP0DMP2 458 aa23.65■■□□□ 1.38
OTUB1-212ENST00000543988 EPCAMP16422 314 aa23.65■■□□□ 1.38
OTUB1-212ENST00000543988 CYP3A5P20815 502 aa23.65■■□□□ 1.38
OTUB1-212ENST00000543988 LRPAP1P30533 357 aa23.65■■□□□ 1.38
OTUB1-212ENST00000543988 PRSS55Q6UWB4 352 aaPredicted RBP23.65■■□□□ 1.38
OTUB1-212ENST00000543988 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.65■■□□□ 1.38
OTUB1-212ENST00000543988 GPR65Q8IYL9 337 aa23.65■■□□□ 1.38
OTUB1-212ENST00000543988 NOC3LQ8WTT2 800 aaKnown RBP23.65■■□□□ 1.38
OTUB1-212ENST00000543988 SLC22A17Q8WUG5 538 aa23.65■■□□□ 1.38
OTUB1-212ENST00000543988 RBAKQ9NYW8 714 aaPredicted RBP23.65■■□□□ 1.38
OTUB1-212ENST00000543988 HSPBP1Q9NZL4 362 aa23.65■■□□□ 1.38
OTUB1-212ENST00000543988 DERAQ9Y315 318 aa23.65■■□□□ 1.38
OTUB1-212ENST00000543988 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.65■■□□□ 1.38
OTUB1-212ENST00000543988 CITO14578 2027 aa23.65■■□□□ 1.38
OTUB1-212ENST00000543988 VCANP13611 3396 aa23.65■■□□□ 1.38
OTUB1-212ENST00000543988 XPOTO43592 962 aaKnown RBP23.64■■□□□ 1.37
OTUB1-212ENST00000543988 IL18RAPO95256 599 aa23.64■■□□□ 1.37
OTUB1-212ENST00000543988 RPL17P18621 184 aaKnown RBP23.64■■□□□ 1.37
OTUB1-212ENST00000543988 FGFR3P22607 806 aa23.64■■□□□ 1.37
OTUB1-212ENST00000543988 KLRC2P26717 231 aa23.64■■□□□ 1.37
OTUB1-212ENST00000543988 PSMD2Q13200 908 aa23.64■■□□□ 1.37
OTUB1-212ENST00000543988 KNOP1Q1ED39 458 aaKnown RBP23.64■■□□□ 1.37
OTUB1-212ENST00000543988 SPATA1Q5VX52 437 aa23.64■■□□□ 1.37
OTUB1-212ENST00000543988 ANKRD54Q6NXT1 300 aa23.64■■□□□ 1.37
OTUB1-212ENST00000543988 KANK3Q6NY19 840 aa23.64■■□□□ 1.37
OTUB1-212ENST00000543988 HS2ST1Q7LGA3 356 aa23.64■■□□□ 1.37
OTUB1-212ENST00000543988 CEP57Q86XR8 500 aa23.64■■□□□ 1.37
OTUB1-212ENST00000543988 EFCAB13Q8IY85 973 aa23.64■■□□□ 1.37
OTUB1-212ENST00000543988 GPD1LQ8N335 351 aa23.64■■□□□ 1.37
OTUB1-212ENST00000543988 SMRP1Q8NCR6 262 aa23.64■■□□□ 1.37
OTUB1-212ENST00000543988 BEST2Q8NFU1 509 aa23.64■■□□□ 1.37
OTUB1-212ENST00000543988 ADAMTS19Q8TE59 1207 aa23.64■■□□□ 1.37
OTUB1-212ENST00000543988 PIK3R5Q8WYR1 880 aa23.64■■□□□ 1.37
OTUB1-212ENST00000543988 CASP10Q92851 521 aa23.64■■□□□ 1.37
OTUB1-212ENST00000543988 C2CD2Q9Y426 696 aa23.64■■□□□ 1.37
OTUB1-212ENST00000543988 CUL9Q8IWT3 2517 aa23.63■■□□□ 1.37
OTUB1-212ENST00000543988 GRXCR2A6NFK2 248 aa23.63■■□□□ 1.37
OTUB1-212ENST00000543988 PPEF2O14830 753 aa23.63■■□□□ 1.37
OTUB1-212ENST00000543988 KIAA0391O15091 583 aaKnown RBP23.63■■□□□ 1.37
OTUB1-212ENST00000543988 TRAPPC3O43617 180 aa23.63■■□□□ 1.37
OTUB1-212ENST00000543988 RHOBTB3O94955 611 aa23.63■■□□□ 1.37
OTUB1-212ENST00000543988 LDHAP00338 332 aaKnown RBP23.63■■□□□ 1.37
OTUB1-212ENST00000543988 ADH1AP07327 375 aa23.63■■□□□ 1.37
OTUB1-212ENST00000543988 IL9P15248 144 aa23.63■■□□□ 1.37
OTUB1-212ENST00000543988 TKTP29401 623 aaKnown RBP23.63■■□□□ 1.37
OTUB1-212ENST00000543988 CLCN4P51793 760 aa23.63■■□□□ 1.37
OTUB1-212ENST00000543988 SMAD4Q13485 552 aaKnown RBP23.63■■□□□ 1.37
OTUB1-212ENST00000543988 PNOCQ13519 176 aa23.63■■□□□ 1.37
OTUB1-212ENST00000543988 PUS10Q3MIT2 529 aaKnown RBP23.63■■□□□ 1.37
OTUB1-212ENST00000543988 PPFIBP1Q86W92 1011 aa23.63■■□□□ 1.37
OTUB1-212ENST00000543988 CBWD2Q8IUF1 395 aa23.63■■□□□ 1.37
OTUB1-212ENST00000543988 CCDC34Q96HJ3 373 aa23.63■■□□□ 1.37
OTUB1-212ENST00000543988 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.63■■□□□ 1.374e-9■■■■■ 37.2
OTUB1-212ENST00000543988 NUB1Q9Y5A7 615 aa23.63■■□□□ 1.37
OTUB1-212ENST00000543988 TRIP11Q15643 1979 aa23.62■■□□□ 1.37
OTUB1-212ENST00000543988 CLIC2O15247 247 aa23.62■■□□□ 1.37
OTUB1-212ENST00000543988 CYP2J2P51589 502 aa23.62■■□□□ 1.37
OTUB1-212ENST00000543988 CREMQ03060 361 aa23.62■■□□□ 1.37
OTUB1-212ENST00000543988 PSMD5Q16401 504 aa23.62■■□□□ 1.37
OTUB1-212ENST00000543988 SYCE2Q6PIF2 218 aa23.62■■□□□ 1.37
OTUB1-212ENST00000543988 LNX1Q8TBB1 728 aaPredicted RBP23.62■■□□□ 1.37
OTUB1-212ENST00000543988 CCDC47Q96A33 483 aaKnown RBP23.62■■□□□ 1.37
OTUB1-212ENST00000543988 FAM84AQ96KN4 292 aa23.62■■□□□ 1.37
OTUB1-212ENST00000543988 NECAB3Q96P71 396 aaPredicted RBP23.62■■□□□ 1.37
OTUB1-212ENST00000543988 COL25A1Q9BXS0 654 aaPredicted RBP23.62■■□□□ 1.37
OTUB1-212ENST00000543988 FNIP2Q9P278 1114 aa23.62■■□□□ 1.37
OTUB1-212ENST00000543988 TULP1O00294 542 aaPredicted RBP23.61■■□□□ 1.37
OTUB1-212ENST00000543988 MBTPS2O43462 519 aa23.61■■□□□ 1.37
OTUB1-212ENST00000543988 MCM4P33991 863 aa23.61■■□□□ 1.37
OTUB1-212ENST00000543988 SNRPFP62306 86 aaKnown RBP23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms