RNA–Protein interactions for RNA: ENST00000543543.5

HMBS-217, Transcript of hydroxymethylbilane synthase, humanhuman

TSL 5

Gene HMBS, Length 1,796 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBS-217ENST00000543543 H2AFVQ71UI9 128 aa11.8□□□□□ -0.52
HMBS-217ENST00000543543 RNF180Q86T96 592 aa11.8□□□□□ -0.52
HMBS-217ENST00000543543 SLC35F6Q8N357 371 aa11.8□□□□□ -0.52
HMBS-217ENST00000543543 RAET1EQ8TD07 263 aa11.8□□□□□ -0.52
HMBS-217ENST00000543543 TSEN34Q9BSV6 310 aaKnown RBP11.8□□□□□ -0.52
HMBS-217ENST00000543543 SEZ6LQ9BYH1 1024 aa11.8□□□□□ -0.52
HMBS-217ENST00000543543 CNTN6Q9UQ52 1028 aa11.8□□□□□ -0.52
HMBS-217ENST00000543543 TRIP12Q14669 1992 aaPredicted RBP11.8□□□□□ -0.52
HMBS-217ENST00000543543 CITO14578 2027 aa11.8□□□□□ -0.52
HMBS-217ENST00000543543 MROH7Q68CQ1 1323 aa11.8□□□□□ -0.52
HMBS-217ENST00000543543 RCCD1A6NED2 376 aa11.79□□□□□ -0.52
HMBS-217ENST00000543543 DDX3XO00571 662 aaKnown RBP eCLIP11.79□□□□□ -0.529e-8■■□□□ 13.3
HMBS-217ENST00000543543 URI1O94763 535 aaPredicted RBP11.79□□□□□ -0.52
HMBS-217ENST00000543543 SLU7O95391 586 aaKnown RBP11.79□□□□□ -0.52
HMBS-217ENST00000543543 PDE6CP51160 858 aa11.79□□□□□ -0.52
HMBS-217ENST00000543543 NOP14P78316 857 aaKnown RBP11.79□□□□□ -0.52
HMBS-217ENST00000543543 CUL2Q13617 745 aa11.79□□□□□ -0.52
HMBS-217ENST00000543543 SNX17Q15036 470 aa11.79□□□□□ -0.52
HMBS-217ENST00000543543 TTC39CQ8N584 583 aa11.79□□□□□ -0.52
HMBS-217ENST00000543543 OR5B17Q8NGF7 314 aa11.79□□□□□ -0.52
HMBS-217ENST00000543543 SH3TC2Q8TF17 1288 aa11.79□□□□□ -0.52
HMBS-217ENST00000543543 DNAJB3Q8WWF6 145 aa11.79□□□□□ -0.52
HMBS-217ENST00000543543 VRTNQ9H8Y1 702 aa11.79□□□□□ -0.52
HMBS-217ENST00000543543 DDX20Q9UHI6 824 aaKnown RBP11.79□□□□□ -0.52
HMBS-217ENST00000543543 JRKLQ9Y4A0 524 aa11.79□□□□□ -0.52
HMBS-217ENST00000543543 PCDHB2Q9Y5E7 798 aa11.79□□□□□ -0.52
HMBS-217ENST00000543543 PTPRJQ12913 1337 aa11.79□□□□□ -0.52
HMBS-217ENST00000543543 RALGAPA2Q2PPJ7 1873 aa11.79□□□□□ -0.52
HMBS-217ENST00000543543 LRRN2O75325 713 aa11.79□□□□□ -0.52
HMBS-217ENST00000543543 STAU1O95793 577 aaKnown RBP11.79□□□□□ -0.52
HMBS-217ENST00000543543 PRLRP16471 622 aa11.79□□□□□ -0.52
HMBS-217ENST00000543543 WNT7BP56706 349 aa11.79□□□□□ -0.52
HMBS-217ENST00000543543 CHMP4BP1P59074 171 aa11.79□□□□□ -0.52
HMBS-217ENST00000543543 TCEAL1Q15170 157 aa11.79□□□□□ -0.52
HMBS-217ENST00000543543 NBPF20Q3BBV1 942 aa11.79□□□□□ -0.52
HMBS-217ENST00000543543 CCSAPQ6IQ19 270 aaPredicted RBP11.79□□□□□ -0.52
HMBS-217ENST00000543543 RUFY4Q6ZNE9 571 aa11.79□□□□□ -0.52
HMBS-217ENST00000543543 FAM43BQ6ZT52 329 aaPredicted RBP11.79□□□□□ -0.52
HMBS-217ENST00000543543 EPS8L1Q8TE68 723 aa11.79□□□□□ -0.52
HMBS-217ENST00000543543 TATDN2Q93075 761 aa11.79□□□□□ -0.52
HMBS-217ENST00000543543 ZNF668Q96K58 619 aaPredicted RBP11.79□□□□□ -0.52
HMBS-217ENST00000543543 CELF4Q9BZC1 486 aaKnown RBP11.79□□□□□ -0.52
HMBS-217ENST00000543543 IRX2Q9BZI1 471 aaPredicted RBP11.79□□□□□ -0.52
HMBS-217ENST00000543543 NIF3L1Q9GZT8 377 aa11.79□□□□□ -0.52
HMBS-217ENST00000543543 CDC23Q9UJX2 597 aa11.79□□□□□ -0.52
HMBS-217ENST00000543543 MRFAP1Q9Y605 127 aa11.79□□□□□ -0.52
HMBS-217ENST00000543543 A0A0U1RQJ8 604 aa11.78□□□□□ -0.52
HMBS-217ENST00000543543 ANKRD62A6NC57 917 aa11.78□□□□□ -0.52
HMBS-217ENST00000543543 MYADML2A6NDP7 307 aa11.78□□□□□ -0.52
HMBS-217ENST00000543543 MOXD2PA6NHM9 499 aa11.78□□□□□ -0.52
HMBS-217ENST00000543543 CAND2O75155 1236 aa11.78□□□□□ -0.52
HMBS-217ENST00000543543 RTN2O75298 545 aa11.78□□□□□ -0.52
HMBS-217ENST00000543543 PGK1P00558 417 aa11.78□□□□□ -0.52
HMBS-217ENST00000543543 TMEM253P0C7T8 217 aa11.78□□□□□ -0.52
HMBS-217ENST00000543543 CXCL8P10145 99 aa11.78□□□□□ -0.52
HMBS-217ENST00000543543 P4HA1P13674 534 aa11.78□□□□□ -0.52
HMBS-217ENST00000543543 EN2P19622 333 aaPredicted RBP11.78□□□□□ -0.52
HMBS-217ENST00000543543 HOXA11P31270 313 aaPredicted RBP11.78□□□□□ -0.52
HMBS-217ENST00000543543 USP8P40818 1118 aa11.78□□□□□ -0.52
HMBS-217ENST00000543543 YARSP54577 528 aaKnown RBP11.78□□□□□ -0.52
HMBS-217ENST00000543543 MRPS6P82932 125 aaKnown RBP11.78□□□□□ -0.52
HMBS-217ENST00000543543 TFAMQ00059 246 aaKnown RBP11.78□□□□□ -0.52
HMBS-217ENST00000543543 CDR2Q01850 454 aa11.78□□□□□ -0.52
HMBS-217ENST00000543543 WHAMMP3Q1A5X7 153 aa11.78□□□□□ -0.52
HMBS-217ENST00000543543 SEZ6Q53EL9 994 aa11.78□□□□□ -0.52
HMBS-217ENST00000543543 PAPD7Q5XG87 772 aaKnown RBP11.78□□□□□ -0.52
HMBS-217ENST00000543543 LMBRD2Q68DH5 695 aaPredicted RBP11.78□□□□□ -0.52
HMBS-217ENST00000543543 CXCL17Q6UXB2 119 aa11.78□□□□□ -0.52
HMBS-217ENST00000543543 TRIM72Q6ZMU5 477 aa11.78□□□□□ -0.52
HMBS-217ENST00000543543 SERINC5Q86VE9 423 aa11.78□□□□□ -0.52
HMBS-217ENST00000543543 GLYCTKQ8IVS8 523 aa11.78□□□□□ -0.52
HMBS-217ENST00000543543 U2AF1L4Q8WU68 220 aaKnown RBP11.78□□□□□ -0.52
HMBS-217ENST00000543543 ATRIPQ8WXE1 791 aa11.78□□□□□ -0.52
HMBS-217ENST00000543543 FAM212AQ96EL1 285 aa11.78□□□□□ -0.52
HMBS-217ENST00000543543 CPB2Q96IY4 423 aa11.78□□□□□ -0.52
HMBS-217ENST00000543543 OSMRQ99650 979 aa11.78□□□□□ -0.52
HMBS-217ENST00000543543 MTMR12Q9C0I1 747 aa11.78□□□□□ -0.52
HMBS-217ENST00000543543 ISCUQ9H1K1 167 aa11.78□□□□□ -0.52
HMBS-217ENST00000543543 NOCTQ9UK39 431 aaKnown RBP11.78□□□□□ -0.52
HMBS-217ENST00000543543 ITGA11Q9UKX5 1188 aa11.78□□□□□ -0.52
HMBS-217ENST00000543543 TRPV2Q9Y5S1 764 aa11.78□□□□□ -0.52
HMBS-217ENST00000543543 MYH10P35580 1976 aa11.77□□□□□ -0.52
HMBS-217ENST00000543543 MACROD2A1Z1Q3 448 aa11.77□□□□□ -0.52
HMBS-217ENST00000543543 LACTBL1A8MY62 500 aa11.77□□□□□ -0.52
HMBS-217ENST00000543543 CYP26A1O43174 497 aa11.77□□□□□ -0.52
HMBS-217ENST00000543543 XPOTO43592 962 aaKnown RBP11.77□□□□□ -0.52
HMBS-217ENST00000543543 ASGR1P07306 291 aa11.77□□□□□ -0.52
HMBS-217ENST00000543543 ELNP15502 786 aa11.77□□□□□ -0.52
HMBS-217ENST00000543543 CYP11B1P15538 503 aa11.77□□□□□ -0.52
HMBS-217ENST00000543543 CCND3P30281 292 aaPredicted RBP11.77□□□□□ -0.52
HMBS-217ENST00000543543 HIC1Q14526 733 aa11.77□□□□□ -0.52
HMBS-217ENST00000543543 TMEM132DQ14C87 1099 aa11.77□□□□□ -0.52
HMBS-217ENST00000543543 KCNA10Q16322 511 aa11.77□□□□□ -0.52
HMBS-217ENST00000543543 CEP112Q8N8E3 955 aa11.77□□□□□ -0.52
HMBS-217ENST00000543543 LNX1Q8TBB1 728 aaPredicted RBP11.77□□□□□ -0.52
HMBS-217ENST00000543543 CTNNBL1Q8WYA6 563 aaPredicted RBP11.77□□□□□ -0.52
HMBS-217ENST00000543543 CHST12Q9NRB3 414 aa11.77□□□□□ -0.52
HMBS-217ENST00000543543 OGFRQ9NZT2 677 aa11.77□□□□□ -0.52
HMBS-217ENST00000543543 TRIM10Q9UDY6 481 aa11.77□□□□□ -0.52
HMBS-217ENST00000543543 PCDHGC5Q9Y5F6 944 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms