RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 FXR1P51114 621 aaKnown RBP eCLIP6.83□□□□□ -1.32
LTBR-212ENST00000543542 VAMP7P51809 220 aa6.83□□□□□ -1.32
LTBR-212ENST00000543542 GUCY2FP51841 1108 aa6.83□□□□□ -1.32
LTBR-212ENST00000543542 PMS1P54277 932 aaKnown RBP6.83□□□□□ -1.32
LTBR-212ENST00000543542 TYRO3Q06418 890 aa6.83□□□□□ -1.32
LTBR-212ENST00000543542 TRPC3Q13507 836 aa6.83□□□□□ -1.32
LTBR-212ENST00000543542 GRIN2CQ14957 1233 aa6.83□□□□□ -1.32
LTBR-212ENST00000543542 PSMD6Q15008 389 aa6.83□□□□□ -1.32
LTBR-212ENST00000543542 NFIL3Q16649 462 aa6.83□□□□□ -1.32
LTBR-212ENST00000543542 PTPROQ16827 1216 aa6.83□□□□□ -1.32
LTBR-212ENST00000543542 DUOXA2Q1HG44 320 aa6.83□□□□□ -1.32
LTBR-212ENST00000543542 XKR4Q5GH76 650 aa6.83□□□□□ -1.32
LTBR-212ENST00000543542 SPATA1Q5VX52 437 aa6.83□□□□□ -1.32
LTBR-212ENST00000543542 KIAA1841Q6NSI8 718 aa6.83□□□□□ -1.32
LTBR-212ENST00000543542 DCLRE1AQ6PJP8 1040 aa6.83□□□□□ -1.32
LTBR-212ENST00000543542 DSTYKQ6XUX3 929 aa6.83□□□□□ -1.32
LTBR-212ENST00000543542 INTS8Q75QN2 995 aaKnown RBP6.83□□□□□ -1.32
LTBR-212ENST00000543542 TMC7Q7Z402 723 aa6.83□□□□□ -1.32
LTBR-212ENST00000543542 SPRED2Q7Z698 418 aa6.83□□□□□ -1.32
LTBR-212ENST00000543542 CEP57Q86XR8 500 aa6.83□□□□□ -1.32
LTBR-212ENST00000543542 NT5DC4Q86YG4 428 aa6.83□□□□□ -1.32
LTBR-212ENST00000543542 WDR49Q8IV35 697 aa6.83□□□□□ -1.32
LTBR-212ENST00000543542 SLC39A11Q8N1S5 342 aa6.83□□□□□ -1.32
LTBR-212ENST00000543542 GSTCDQ8NEC7 633 aa6.83□□□□□ -1.32
LTBR-212ENST00000543542 POF1BQ8WVV4 589 aa6.83□□□□□ -1.32
LTBR-212ENST00000543542 IGSF21Q96ID5 467 aa6.83□□□□□ -1.32
LTBR-212ENST00000543542 ZNF560Q96MR9 790 aa6.83□□□□□ -1.32
LTBR-212ENST00000543542 CEP63Q96MT8 703 aa6.83□□□□□ -1.32
LTBR-212ENST00000543542 CGRRF1Q99675 332 aa6.83□□□□□ -1.32
LTBR-212ENST00000543542 SRRTQ9BXP5 876 aaKnown RBP6.83□□□□□ -1.32
LTBR-212ENST00000543542 GZF1Q9H116 711 aaPredicted RBP6.83□□□□□ -1.32
LTBR-212ENST00000543542 TTYH1Q9H313 450 aaPredicted RBP6.83□□□□□ -1.32
LTBR-212ENST00000543542 DMAC2Q9NW81 257 aa6.83□□□□□ -1.32
LTBR-212ENST00000543542 ADAM28Q9UKQ2 775 aa6.83□□□□□ -1.32
LTBR-212ENST00000543542 AGAP1Q9UPQ3 857 aa6.83□□□□□ -1.32
LTBR-212ENST00000543542 C2CD2Q9Y426 696 aa6.83□□□□□ -1.32
LTBR-212ENST00000543542 SF3B1O75533 1304 aaKnown RBP eCLIP6.82□□□□□ -1.32
LTBR-212ENST00000543542 LRRIQ3A6PVS8 624 aaPredicted RBP6.82□□□□□ -1.32
LTBR-212ENST00000543542 C5orf67F2Z3F1 127 aa6.82□□□□□ -1.32
LTBR-212ENST00000543542 PES1O00541 588 aaKnown RBP6.82□□□□□ -1.32
LTBR-212ENST00000543542 C2CD2LO14523 706 aa6.82□□□□□ -1.32
LTBR-212ENST00000543542 SLC16A3O15427 465 aaKnown RBP6.82□□□□□ -1.32
LTBR-212ENST00000543542 B4GALT3O60512 393 aa6.82□□□□□ -1.32
LTBR-212ENST00000543542 AKAP3O75969 853 aa6.82□□□□□ -1.32
LTBR-212ENST00000543542 KIF4AO95239 1232 aa6.82□□□□□ -1.32
LTBR-212ENST00000543542 GNA14O95837 355 aa6.82□□□□□ -1.32
LTBR-212ENST00000543542 ITGB3P05106 788 aa6.82□□□□□ -1.32
LTBR-212ENST00000543542 ITGB1P05556 798 aa6.82□□□□□ -1.32
LTBR-212ENST00000543542 URODP06132 367 aa6.82□□□□□ -1.32
LTBR-212ENST00000543542 TPM2P07951 284 aa6.82□□□□□ -1.32
LTBR-212ENST00000543542 TRIM49P0CI25 452 aa6.82□□□□□ -1.32
LTBR-212ENST00000543542 TRIM49CP0CI26 452 aa6.82□□□□□ -1.32
LTBR-212ENST00000543542 FOSL2P15408 326 aa6.82□□□□□ -1.32
LTBR-212ENST00000543542 ERCC5P28715 1186 aaPredicted RBP6.82□□□□□ -1.32
LTBR-212ENST00000543542 POLR2BP30876 1174 aaKnown RBP6.82□□□□□ -1.32
LTBR-212ENST00000543542 MTIF2P46199 727 aaKnown RBP6.82□□□□□ -1.32
LTBR-212ENST00000543542 AP3M2P53677 418 aa6.82□□□□□ -1.32
LTBR-212ENST00000543542 WNT7BP56706 349 aa6.82□□□□□ -1.32
LTBR-212ENST00000543542 RBP5P82980 135 aa6.82□□□□□ -1.32
LTBR-212ENST00000543542 PLCB3Q01970 1234 aa6.82□□□□□ -1.32
LTBR-212ENST00000543542 UBE3AQ05086 875 aa6.82□□□□□ -1.32
LTBR-212ENST00000543542 SOX4Q06945 474 aaPredicted RBP6.82□□□□□ -1.32
LTBR-212ENST00000543542 DSC1Q08554 894 aa6.82□□□□□ -1.32
LTBR-212ENST00000543542 ELAVL2Q12926 359 aaKnown RBP6.82□□□□□ -1.32
LTBR-212ENST00000543542 BFSP1Q12934 665 aa6.82□□□□□ -1.32
LTBR-212ENST00000543542 MYO1EQ12965 1108 aa6.82□□□□□ -1.32
LTBR-212ENST00000543542 UPP1Q16831 310 aa6.82□□□□□ -1.32
LTBR-212ENST00000543542 ZSCAN23Q3MJ62 389 aa6.82□□□□□ -1.32
LTBR-212ENST00000543542 SV2CQ496J9 727 aa6.82□□□□□ -1.32
LTBR-212ENST00000543542 ANO6Q4KMQ2 910 aa6.82□□□□□ -1.32
LTBR-212ENST00000543542 ZCWPW2Q504Y3 356 aa6.82□□□□□ -1.32
LTBR-212ENST00000543542 CT47A1Q5JQC4 288 aaPredicted RBP6.82□□□□□ -1.32
LTBR-212ENST00000543542 PLPP4Q5VZY2 271 aa6.82□□□□□ -1.32
LTBR-212ENST00000543542 GPR153Q6NV75 609 aa6.82□□□□□ -1.32
LTBR-212ENST00000543542 TTI2Q6NXR4 508 aa6.82□□□□□ -1.32
LTBR-212ENST00000543542 FUT10Q6P4F1 479 aa6.82□□□□□ -1.32
LTBR-212ENST00000543542 RBM43Q6ZSC3 357 aaKnown RBP6.82□□□□□ -1.32
LTBR-212ENST00000543542 FILIP1Q7Z7B0 1213 aa6.82□□□□□ -1.32
LTBR-212ENST00000543542 FAM114A1Q8IWE2 563 aa6.82□□□□□ -1.32
LTBR-212ENST00000543542 EFCAB13Q8IY85 973 aa6.82□□□□□ -1.32
LTBR-212ENST00000543542 VPS52Q8N1B4 723 aa6.82□□□□□ -1.32
LTBR-212ENST00000543542 CCDC150Q8NCX0 1101 aa6.82□□□□□ -1.32
LTBR-212ENST00000543542 SPPL3Q8TCT6 385 aa6.82□□□□□ -1.32
LTBR-212ENST00000543542 PPM1EQ8WY54 764 aa6.82□□□□□ -1.32
LTBR-212ENST00000543542 MYLIPQ8WY64 445 aa6.82□□□□□ -1.32
LTBR-212ENST00000543542 PPP2R3CQ969Q6 453 aa6.82□□□□□ -1.32
LTBR-212ENST00000543542 MFSD14AQ96MC6 490 aa6.82□□□□□ -1.32
LTBR-212ENST00000543542 FBXL18Q96ME1 805 aa6.82□□□□□ -1.32
LTBR-212ENST00000543542 POP1Q99575 1024 aaKnown RBP6.82□□□□□ -1.32
LTBR-212ENST00000543542 DUSP9Q99956 384 aaKnown RBP6.82□□□□□ -1.32
LTBR-212ENST00000543542 TCF25Q9BQ70 676 aa6.82□□□□□ -1.32
LTBR-212ENST00000543542 PAAF1Q9BRP4 392 aa6.82□□□□□ -1.32
LTBR-212ENST00000543542 MKNK1Q9BUB5 465 aa6.82□□□□□ -1.32
LTBR-212ENST00000543542 MTMR12Q9C0I1 747 aa6.82□□□□□ -1.32
LTBR-212ENST00000543542 LMAN2LQ9H0V9 348 aa6.82□□□□□ -1.32
LTBR-212ENST00000543542 DNAJC25Q9H1X3 360 aa6.82□□□□□ -1.32
LTBR-212ENST00000543542 METTL14Q9HCE5 456 aaKnown RBP6.82□□□□□ -1.32
LTBR-212ENST00000543542 TLR9Q9NR96 1032 aa6.82□□□□□ -1.32
LTBR-212ENST00000543542 INTS13Q9NVM9 706 aa6.82□□□□□ -1.32
LTBR-212ENST00000543542 STK39Q9UEW8 545 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms