RNA–Protein interactions for RNA: ENST00000543153.1

RFC5-209, Transcript of replication factor C subunit 5, humanhuman

TSL 5

Gene RFC5, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-209ENST00000543153 LRRC2Q9BYS8 371 aa11.49□□□□□ -0.57
RFC5-209ENST00000543153 SMARCAD1Q9H4L7 1026 aa11.49□□□□□ -0.57
RFC5-209ENST00000543153 RWDD3Q9Y3V2 267 aa11.49□□□□□ -0.57
RFC5-209ENST00000543153 ADGRA3Q8IWK6 1321 aa11.49□□□□□ -0.57
RFC5-209ENST00000543153 SIP14410 1827 aa11.49□□□□□ -0.57
RFC5-209ENST00000543153 MYH7BA7E2Y1 1941 aa11.48□□□□□ -0.57
RFC5-209ENST00000543153 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.48□□□□□ -0.57
RFC5-209ENST00000543153 MSTNO14793 375 aa11.48□□□□□ -0.57
RFC5-209ENST00000543153 ATP9AO75110 1047 aa11.48□□□□□ -0.57
RFC5-209ENST00000543153 CHRNA1P02708 482 aa11.48□□□□□ -0.57
RFC5-209ENST00000543153 KCNA2P16389 499 aa11.48□□□□□ -0.57
RFC5-209ENST00000543153 ITGB5P18084 799 aa11.48□□□□□ -0.57
RFC5-209ENST00000543153 NAPAP54920 295 aa11.48□□□□□ -0.57
RFC5-209ENST00000543153 LPIN1Q14693 890 aa11.48□□□□□ -0.57
RFC5-209ENST00000543153 PRAMEF13Q5VWM6 474 aa11.48□□□□□ -0.57
RFC5-209ENST00000543153 UBE3DQ7Z6J8 389 aa11.48□□□□□ -0.57
RFC5-209ENST00000543153 FAM178BQ8IXR5 827 aa11.48□□□□□ -0.57
RFC5-209ENST00000543153 SLFN12Q8IYM2 578 aa11.48□□□□□ -0.57
RFC5-209ENST00000543153 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.48□□□□□ -0.57
RFC5-209ENST00000543153 TNPO1Q92973 898 aaKnown RBP11.48□□□□□ -0.57
RFC5-209ENST00000543153 SHDQ96IW2 340 aa11.48□□□□□ -0.57
RFC5-209ENST00000543153 TM9SF2Q99805 663 aa11.48□□□□□ -0.57
RFC5-209ENST00000543153 MTA3Q9BTC8 594 aa11.48□□□□□ -0.57
RFC5-209ENST00000543153 SLC9A2Q9UBY0 812 aa11.48□□□□□ -0.57
RFC5-209ENST00000543153 NAP1L2Q9ULW6 460 aaPredicted RBP11.48□□□□□ -0.57
RFC5-209ENST00000543153 PCDHA6Q9UN73 950 aa11.48□□□□□ -0.57
RFC5-209ENST00000543153 PCDHA8Q9Y5H6 950 aa11.48□□□□□ -0.57
RFC5-209ENST00000543153 CDY2AQ9Y6F7 541 aa11.48□□□□□ -0.57
RFC5-209ENST00000543153 CHURC1-FNTBB4DL54 471 aa11.47□□□□□ -0.57
RFC5-209ENST00000543153 SLC27A2O14975 620 aa11.47□□□□□ -0.57
RFC5-209ENST00000543153 ITGB2P05107 769 aa11.47□□□□□ -0.57
RFC5-209ENST00000543153 RPLP2P05387 115 aaKnown RBP11.47□□□□□ -0.57
RFC5-209ENST00000543153 LIFRP42702 1097 aa11.47□□□□□ -0.57
RFC5-209ENST00000543153 ADAM17P78536 824 aa11.47□□□□□ -0.57
RFC5-209ENST00000543153 MRPS6P82932 125 aaKnown RBP11.47□□□□□ -0.57
RFC5-209ENST00000543153 TMEM62Q0P6H9 643 aa11.47□□□□□ -0.57
RFC5-209ENST00000543153 CLUL1Q15846 466 aa11.47□□□□□ -0.57
RFC5-209ENST00000543153 ARSHQ5FYA8 562 aa11.47□□□□□ -0.57
RFC5-209ENST00000543153 OVOS1Q6IE37 1185 aa11.47□□□□□ -0.57
RFC5-209ENST00000543153 TSHZ1Q6ZSZ6 1077 aa11.47□□□□□ -0.57
RFC5-209ENST00000543153 TMTC3Q6ZXV5 915 aa11.47□□□□□ -0.57
RFC5-209ENST00000543153 NLRC3Q7RTR2 1065 aa11.47□□□□□ -0.57
RFC5-209ENST00000543153 PHACTR4Q8IZ21 702 aa11.47□□□□□ -0.57
RFC5-209ENST00000543153 PPP2R3CQ969Q6 453 aa11.47□□□□□ -0.57
RFC5-209ENST00000543153 PABPC5Q96DU9 382 aaKnown RBP11.47□□□□□ -0.57
RFC5-209ENST00000543153 C7orf69Q9H7B7 122 aa11.47□□□□□ -0.57
RFC5-209ENST00000543153 CD320Q9NPF0 282 aa11.47□□□□□ -0.57
RFC5-209ENST00000543153 TCEAL9Q9UHQ7 104 aa11.47□□□□□ -0.57
RFC5-209ENST00000543153 GINS2Q9Y248 185 aa11.47□□□□□ -0.57
RFC5-209ENST00000543153 REV3LO60673 3130 aa11.47□□□□□ -0.57
RFC5-209ENST00000543153 BAZ2BQ9UIF8 2168 aaKnown RBP11.47□□□□□ -0.57
RFC5-209ENST00000543153 MICAL3Q7RTP6 2002 aa11.47□□□□□ -0.57
RFC5-209ENST00000543153 GSTTP1A0A1W2PQM5 241 aa11.46□□□□□ -0.57
RFC5-209ENST00000543153 RRN3P2A6NIE6 340 aa11.46□□□□□ -0.57
RFC5-209ENST00000543153 UPK3BL1B0FP48 263 aa11.46□□□□□ -0.57
RFC5-209ENST00000543153 UPK3BL2E5RIL1 263 aa11.46□□□□□ -0.57
RFC5-209ENST00000543153 MAFGO15525 162 aa11.46□□□□□ -0.57
RFC5-209ENST00000543153 NCK2O43639 380 aa11.46□□□□□ -0.57
RFC5-209ENST00000543153 ALADP13716 330 aa11.46□□□□□ -0.57
RFC5-209ENST00000543153 INSRRP14616 1297 aa11.46□□□□□ -0.57
RFC5-209ENST00000543153 CD52P31358 61 aa11.46□□□□□ -0.57
RFC5-209ENST00000543153 BMPR1AP36894 532 aa11.46□□□□□ -0.57
RFC5-209ENST00000543153 ADCY7P51828 1080 aa11.46□□□□□ -0.57
RFC5-209ENST00000543153 DOC2BQ14184 412 aa11.46□□□□□ -0.57
RFC5-209ENST00000543153 PAN2Q504Q3 1202 aaKnown RBP11.46□□□□□ -0.57
RFC5-209ENST00000543153 FBXO47Q5MNV8 452 aa11.46□□□□□ -0.57
RFC5-209ENST00000543153 CDCP2Q5VXM1 449 aa11.46□□□□□ -0.57
RFC5-209ENST00000543153 CREB3L3Q68CJ9 461 aa11.46□□□□□ -0.57
RFC5-209ENST00000543153 RPAINQ86UA6 219 aa11.46□□□□□ -0.57
RFC5-209ENST00000543153 FANCBQ8NB91 859 aa11.46□□□□□ -0.57
RFC5-209ENST00000543153 UBXN4Q92575 508 aa11.46□□□□□ -0.57
RFC5-209ENST00000543153 PGBD1Q96JS3 809 aa11.46□□□□□ -0.57
RFC5-209ENST00000543153 DPH2Q9BQC3 489 aaPredicted RBP11.46□□□□□ -0.57
RFC5-209ENST00000543153 LMAN2LQ9H0V9 348 aa11.46□□□□□ -0.57
RFC5-209ENST00000543153 JADE2Q9NQC1 790 aa11.46□□□□□ -0.57
RFC5-209ENST00000543153 KCNH7Q9NS40 1196 aa11.46□□□□□ -0.57
RFC5-209ENST00000543153 RBM28Q9NW13 759 aaKnown RBP11.46□□□□□ -0.57
RFC5-209ENST00000543153 R3HCC1Q9Y3T6 440 aaKnown RBP11.46□□□□□ -0.57
RFC5-209ENST00000543153 UBIAD1Q9Y5Z9 338 aa11.46□□□□□ -0.57
RFC5-209ENST00000543153 COL4A6Q14031 1691 aa11.46□□□□□ -0.58
RFC5-209ENST00000543153 HMX2A2RU54 273 aa11.45□□□□□ -0.58
RFC5-209ENST00000543153 PI4K2BG5E9Z4 385 aa11.45□□□□□ -0.58
RFC5-209ENST00000543153 DDX39AO00148 427 aaKnown RBP11.45□□□□□ -0.58
RFC5-209ENST00000543153 GRM6O15303 877 aa11.45□□□□□ -0.58
RFC5-209ENST00000543153 RB1P06400 928 aa11.45□□□□□ -0.58
RFC5-209ENST00000543153 STAG3L1P0CL83 205 aa11.45□□□□□ -0.58
RFC5-209ENST00000543153 MGAT3Q09327 533 aa11.45□□□□□ -0.58
RFC5-209ENST00000543153 SPOUT1Q5T280 376 aaKnown RBP11.45□□□□□ -0.58
RFC5-209ENST00000543153 WWC2Q6AWC2 1192 aa11.45□□□□□ -0.58
RFC5-209ENST00000543153 SEZ6L2Q6UXD5 910 aa11.45□□□□□ -0.58
RFC5-209ENST00000543153 LSRQ86X29 649 aaPredicted RBP11.45□□□□□ -0.58
RFC5-209ENST00000543153 NEK9Q8TD19 979 aa11.45□□□□□ -0.58
RFC5-209ENST00000543153 TRAPPC12Q8WVT3 735 aa11.45□□□□□ -0.58
RFC5-209ENST00000543153 ZBTB10Q96DT7 871 aa11.45□□□□□ -0.58
RFC5-209ENST00000543153 CCDC74BQ96LY2 380 aa11.45□□□□□ -0.58
RFC5-209ENST00000543153 FTHL17Q9BXU8 183 aa11.45□□□□□ -0.58
RFC5-209ENST00000543153 LSG1Q9H089 658 aaKnown RBP11.45□□□□□ -0.58
RFC5-209ENST00000543153 TRPV2Q9Y5S1 764 aa11.45□□□□□ -0.58
RFC5-209ENST00000543153 MBLAC1A4D2B0 266 aaPredicted RBP11.44□□□□□ -0.58
RFC5-209ENST00000543153 GOLGA8AA7E2F4 631 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms