RNA–Protein interactions for RNA: ENST00000543115.5

PTPN6-220, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 4

Gene PTPN6, Length 650 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-220ENST00000543115 ZPBP2Q6X784 338 aa13.18□□□□□ -0.3
PTPN6-220ENST00000543115 REEP2Q9BRK0 252 aa13.18□□□□□ -0.3
PTPN6-220ENST00000543115 IRF2BPLQ9H1B7 796 aa13.18□□□□□ -0.3
PTPN6-220ENST00000543115 KCND2Q9NZV8 630 aa13.18□□□□□ -0.3
PTPN6-220ENST00000543115 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.18□□□□□ -0.3
PTPN6-220ENST00000543115 CLDN3O15551 220 aa13.17□□□□□ -0.3
PTPN6-220ENST00000543115 GFRA3O60609 400 aa13.17□□□□□ -0.3
PTPN6-220ENST00000543115 XYLBO75191 536 aa13.17□□□□□ -0.3
PTPN6-220ENST00000543115 POU2F2P09086 479 aa13.17□□□□□ -0.3
PTPN6-220ENST00000543115 CXCL8P10145 99 aa13.17□□□□□ -0.3
PTPN6-220ENST00000543115 RPL9P32969 192 aaKnown RBP13.17□□□□□ -0.3
PTPN6-220ENST00000543115 TNFSF9P41273 254 aa13.17□□□□□ -0.3
PTPN6-220ENST00000543115 MRPL58Q14197 206 aaKnown RBP13.17□□□□□ -0.3
PTPN6-220ENST00000543115 DHX8Q14562 1220 aaKnown RBP13.17□□□□□ -0.3
PTPN6-220ENST00000543115 KARSQ15046 597 aaKnown RBP13.17□□□□□ -0.3
PTPN6-220ENST00000543115 UVSSAQ2YD98 709 aa13.17□□□□□ -0.3
PTPN6-220ENST00000543115 ZBTB41Q5SVQ8 909 aa13.17□□□□□ -0.3
PTPN6-220ENST00000543115 HAUS6Q7Z4H7 955 aa13.17□□□□□ -0.3
PTPN6-220ENST00000543115 GPBP1Q86WP2 473 aa13.17□□□□□ -0.3
PTPN6-220ENST00000543115 CCDC105Q8IYK2 499 aa13.17□□□□□ -0.3
PTPN6-220ENST00000543115 AK8Q96MA6 479 aa13.17□□□□□ -0.3
PTPN6-220ENST00000543115 LARSQ9P2J5 1176 aaKnown RBP13.17□□□□□ -0.3
PTPN6-220ENST00000543115 ODF2LQ9ULJ1 636 aa13.17□□□□□ -0.3
PTPN6-220ENST00000543115 NUB1Q9Y5A7 615 aa13.17□□□□□ -0.3
PTPN6-220ENST00000543115 ZFP37Q9Y6Q3 630 aaPredicted RBP13.17□□□□□ -0.3
PTPN6-220ENST00000543115 TTC26A0AVF1 554 aa13.16□□□□□ -0.3
PTPN6-220ENST00000543115 PROB1E7EW31 1015 aa13.16□□□□□ -0.3
PTPN6-220ENST00000543115 SYN3O14994 580 aa13.16□□□□□ -0.3
PTPN6-220ENST00000543115 ABLIM3O94929 683 aa13.16□□□□□ -0.3
PTPN6-220ENST00000543115 SEC24AO95486 1093 aa13.16□□□□□ -0.3
PTPN6-220ENST00000543115 PLCG1P19174 1290 aa13.16□□□□□ -0.3
PTPN6-220ENST00000543115 UBA7P41226 1012 aa13.16□□□□□ -0.3
PTPN6-220ENST00000543115 ARPP19P56211 112 aa13.16□□□□□ -0.3
PTPN6-220ENST00000543115 GPC5P78333 572 aa13.16□□□□□ -0.3
PTPN6-220ENST00000543115 MCM6Q14566 821 aa13.16□□□□□ -0.3
PTPN6-220ENST00000543115 SF3A1Q15459 793 aaKnown RBP13.16□□□□□ -0.3
PTPN6-220ENST00000543115 SLC5A9Q2M3M2 681 aa13.16□□□□□ -0.3
PTPN6-220ENST00000543115 PABPC1LQ4VXU2 614 aaKnown RBP13.16□□□□□ -0.3
PTPN6-220ENST00000543115 ASCL5Q7RTU5 278 aa13.16□□□□□ -0.3
PTPN6-220ENST00000543115 NPAS3Q8IXF0 933 aa13.16□□□□□ -0.3
PTPN6-220ENST00000543115 DTWD2Q8NBA8 298 aa13.16□□□□□ -0.3
PTPN6-220ENST00000543115 ZNF461Q8TAF7 563 aa13.16□□□□□ -0.3
PTPN6-220ENST00000543115 ING5Q8WYH8 240 aa13.16□□□□□ -0.3
PTPN6-220ENST00000543115 KCNN1Q92952 543 aa13.16□□□□□ -0.3
PTPN6-220ENST00000543115 SUSD3Q96L08 255 aa13.16□□□□□ -0.3
PTPN6-220ENST00000543115 FIZ1Q96SL8 496 aa13.16□□□□□ -0.3
PTPN6-220ENST00000543115 RTP3Q9BQQ7 232 aa13.16□□□□□ -0.3
PTPN6-220ENST00000543115 TBC1D17Q9HA65 648 aa13.16□□□□□ -0.3
PTPN6-220ENST00000543115 ARHGEF3Q9NR81 526 aa13.16□□□□□ -0.3
PTPN6-220ENST00000543115 SLC2A4RGQ9NR83 387 aa13.16□□□□□ -0.3
PTPN6-220ENST00000543115 KCNG1Q9UIX4 513 aa13.16□□□□□ -0.3
PTPN6-220ENST00000543115 FBXL5Q9UKA1 691 aa13.16□□□□□ -0.3
PTPN6-220ENST00000543115 DOCK8Q8NF50 2099 aa13.16□□□□□ -0.3
PTPN6-220ENST00000543115 COL4A3Q01955 1670 aa13.15□□□□□ -0.3
PTPN6-220ENST00000543115 STK25O00506 426 aa13.15□□□□□ -0.3
PTPN6-220ENST00000543115 NRG2O14511 850 aaPredicted RBP13.15□□□□□ -0.3
PTPN6-220ENST00000543115 SLC26A4O43511 780 aa13.15□□□□□ -0.3
PTPN6-220ENST00000543115 FAM189A1O60320 539 aa13.15□□□□□ -0.3
PTPN6-220ENST00000543115 RHOP08100 348 aa13.15□□□□□ -0.3
PTPN6-220ENST00000543115 ATF2P15336 505 aa13.15□□□□□ -0.3
PTPN6-220ENST00000543115 MCM4P33991 863 aa13.15□□□□□ -0.3
PTPN6-220ENST00000543115 NBL1P41271 181 aa13.15□□□□□ -0.3
PTPN6-220ENST00000543115 MATR3P43243 847 aaKnown RBP eCLIP13.15□□□□□ -0.3
PTPN6-220ENST00000543115 ZNF131P52739 623 aa13.15□□□□□ -0.3
PTPN6-220ENST00000543115 CUL4AQ13619 759 aa13.15□□□□□ -0.3
PTPN6-220ENST00000543115 ZBTB6Q15916 424 aa13.15□□□□□ -0.3
PTPN6-220ENST00000543115 SLC39A4Q6P5W5 647 aa13.15□□□□□ -0.3
PTPN6-220ENST00000543115 USP49Q70CQ1 688 aa13.15□□□□□ -0.3
PTPN6-220ENST00000543115 RTL10Q7L3V2 364 aa13.15□□□□□ -0.3
PTPN6-220ENST00000543115 BRAPQ7Z569 592 aa13.15□□□□□ -0.3
PTPN6-220ENST00000543115 RAD54LQ92698 747 aa13.15□□□□□ -0.3
PTPN6-220ENST00000543115 DDX12PQ92771 950 aa13.15□□□□□ -0.3
PTPN6-220ENST00000543115 BICD1Q96G01 975 aa13.15□□□□□ -0.3
PTPN6-220ENST00000543115 CALML4Q96GE6 196 aa13.15□□□□□ -0.3
PTPN6-220ENST00000543115 TBX20Q9UMR3 447 aa13.15□□□□□ -0.3
PTPN6-220ENST00000543115 CACNA1HO95180 2353 aa13.15□□□□□ -0.3
PTPN6-220ENST00000543115 TRIP11Q15643 1979 aa13.14□□□□□ -0.31
PTPN6-220ENST00000543115 ARHGEF37A1IGU5 675 aa13.14□□□□□ -0.31
PTPN6-220ENST00000543115 VPS37CA5D8V6 355 aaPredicted RBP13.14□□□□□ -0.31
PTPN6-220ENST00000543115 LACTBL1A8MY62 500 aa13.14□□□□□ -0.31
PTPN6-220ENST00000543115 H0YCG3 227 aa13.14□□□□□ -0.31
PTPN6-220ENST00000543115 H7C4K7 107 aa13.14□□□□□ -0.31
PTPN6-220ENST00000543115 K7ENM7 598 aa13.14□□□□□ -0.31
PTPN6-220ENST00000543115 TRAK2O60296 914 aa13.14□□□□□ -0.31
PTPN6-220ENST00000543115 FAM13AO94988 1023 aa13.14□□□□□ -0.31
PTPN6-220ENST00000543115 PIGRP01833 764 aa13.14□□□□□ -0.31
PTPN6-220ENST00000543115 DCNP07585 359 aaKnown RBP13.14□□□□□ -0.31
PTPN6-220ENST00000543115 CLTAP09496 248 aa13.14□□□□□ -0.31
PTPN6-220ENST00000543115 LRPAP1P30533 357 aa13.14□□□□□ -0.31
PTPN6-220ENST00000543115 LONP1P36776 959 aaKnown RBP13.14□□□□□ -0.31
PTPN6-220ENST00000543115 LIG4P49917 911 aa13.14□□□□□ -0.31
PTPN6-220ENST00000543115 GUCY2FP51841 1108 aa13.14□□□□□ -0.31
PTPN6-220ENST00000543115 ANGPT1Q15389 498 aa13.14□□□□□ -0.31
PTPN6-220ENST00000543115 ENOX2Q16206 610 aaKnown RBP13.14□□□□□ -0.31
PTPN6-220ENST00000543115 CTXN3Q4LDR2 81 aa13.14□□□□□ -0.31
PTPN6-220ENST00000543115 SPECC1Q5M775 1068 aa13.14□□□□□ -0.31
PTPN6-220ENST00000543115 PHLDB3Q6NSJ2 640 aa13.14□□□□□ -0.31
PTPN6-220ENST00000543115 FRMD5Q7Z6J6 570 aa13.14□□□□□ -0.31
PTPN6-220ENST00000543115 MYCT1Q8N699 235 aa13.14□□□□□ -0.31
PTPN6-220ENST00000543115 MCRS1Q96EZ8 462 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms