RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 ZSWIM1Q9BR11 485 aa3.3□□□□□ -1.88
KNTC1-213ENST00000542727 ACE2Q9BYF1 805 aaPredicted RBP3.3□□□□□ -1.88
KNTC1-213ENST00000542727 UNKLQ9H9P5 680 aaKnown RBP3.3□□□□□ -1.88
KNTC1-213ENST00000542727 IFT122Q9HBG6 1241 aa3.3□□□□□ -1.88
KNTC1-213ENST00000542727 MTO1Q9Y2Z2 717 aaKnown RBP3.3□□□□□ -1.88
KNTC1-213ENST00000542727 SALL3Q9BXA9 1300 aa3.29□□□□□ -1.88
KNTC1-213ENST00000542727 FAM171A2A8MVW0 826 aa3.29□□□□□ -1.88
KNTC1-213ENST00000542727 KRTAP29-1A8MX34 341 aaPredicted RBP3.29□□□□□ -1.88
KNTC1-213ENST00000542727 PROB1E7EW31 1015 aa3.29□□□□□ -1.88
KNTC1-213ENST00000542727 PEX1O43933 1283 aa3.29□□□□□ -1.88
KNTC1-213ENST00000542727 BRINP1O60477 761 aa3.29□□□□□ -1.88
KNTC1-213ENST00000542727 C1QL1O75973 258 aa3.29□□□□□ -1.88
KNTC1-213ENST00000542727 WT1P19544 449 aaPredicted RBP3.29□□□□□ -1.88
KNTC1-213ENST00000542727 ALDH1A3P47895 512 aa3.29□□□□□ -1.88
KNTC1-213ENST00000542727 SLC5A3P53794 718 aa3.29□□□□□ -1.88
KNTC1-213ENST00000542727 MGAT2Q10469 447 aa3.29□□□□□ -1.88
KNTC1-213ENST00000542727 MALLQ13021 153 aa3.29□□□□□ -1.88
KNTC1-213ENST00000542727 SP5Q6BEB4 398 aaPredicted RBP3.29□□□□□ -1.88
KNTC1-213ENST00000542727 ZNF529Q6P280 563 aa3.29□□□□□ -1.88
KNTC1-213ENST00000542727 DDX46Q7L014 1031 aaKnown RBP3.29□□□□□ -1.88
KNTC1-213ENST00000542727 FITM2Q8N6M3 262 aa3.29□□□□□ -1.88
KNTC1-213ENST00000542727 TIMP4Q99727 224 aa3.29□□□□□ -1.88
KNTC1-213ENST00000542727 ADI1Q9BV57 179 aa3.29□□□□□ -1.88
KNTC1-213ENST00000542727 ARPP21Q9UBL0 812 aaPredicted RBP3.29□□□□□ -1.88
KNTC1-213ENST00000542727 EDARQ9UNE0 448 aa3.29□□□□□ -1.88
KNTC1-213ENST00000542727 NEU2Q9Y3R4 380 aa3.29□□□□□ -1.88
KNTC1-213ENST00000542727 TRGV11A0A075B6L2 103 aa3.28□□□□□ -1.88
KNTC1-213ENST00000542727 NEMP1O14524 444 aa3.28□□□□□ -1.88
KNTC1-213ENST00000542727 MGST3O14880 152 aa3.28□□□□□ -1.88
KNTC1-213ENST00000542727 MPPED1O15442 326 aa3.28□□□□□ -1.88
KNTC1-213ENST00000542727 FOLR3P41439 243 aa3.28□□□□□ -1.88
KNTC1-213ENST00000542727 MCAMP43121 646 aa3.28□□□□□ -1.88
KNTC1-213ENST00000542727 EGFLAMQ63HQ2 1017 aa3.28□□□□□ -1.88
KNTC1-213ENST00000542727 KIAA0895LQ68EN5 471 aa3.28□□□□□ -1.88
KNTC1-213ENST00000542727 KCNK18Q7Z418 384 aa3.28□□□□□ -1.88
KNTC1-213ENST00000542727 NLGN4YQ8NFZ3 816 aaPredicted RBP3.28□□□□□ -1.88
KNTC1-213ENST00000542727 SSH3Q8TE77 659 aa3.28□□□□□ -1.88
KNTC1-213ENST00000542727 LMBR1Q8WVP7 490 aa3.28□□□□□ -1.88
KNTC1-213ENST00000542727 NACC2Q96BF6 587 aa3.28□□□□□ -1.88
KNTC1-213ENST00000542727 SARAFQ96BY9 339 aa3.28□□□□□ -1.88
KNTC1-213ENST00000542727 C1QTNF7Q9BXJ2 289 aa3.28□□□□□ -1.88
KNTC1-213ENST00000542727 QRSL1Q9H0R6 528 aaKnown RBP3.28□□□□□ -1.88
KNTC1-213ENST00000542727 KLK15Q9H2R5 256 aa3.28□□□□□ -1.88
KNTC1-213ENST00000542727 MANSC1Q9H8J5 431 aa3.28□□□□□ -1.88
KNTC1-213ENST00000542727 AJAP1Q9UKB5 411 aaPredicted RBP3.28□□□□□ -1.88
KNTC1-213ENST00000542727 SIK3Q9Y2K2 1263 aa3.28□□□□□ -1.88
KNTC1-213ENST00000542727 ENTPD2Q9Y5L3 495 aa3.28□□□□□ -1.88
KNTC1-213ENST00000542727 A0A1W2PS29 197 aa3.27□□□□□ -1.89
KNTC1-213ENST00000542727 LRRC3CA6NJW4 275 aa3.27□□□□□ -1.89
KNTC1-213ENST00000542727 GOLGA8AA7E2F4 631 aa3.27□□□□□ -1.89
KNTC1-213ENST00000542727 PROM1O43490 865 aa3.27□□□□□ -1.89
KNTC1-213ENST00000542727 GPR32O75388 356 aa3.27□□□□□ -1.89
KNTC1-213ENST00000542727 SRGNP10124 158 aa3.27□□□□□ -1.89
KNTC1-213ENST00000542727 GPD1P21695 349 aa3.27□□□□□ -1.89
KNTC1-213ENST00000542727 CNGA1P29973 690 aa3.27□□□□□ -1.89
KNTC1-213ENST00000542727 MASP1P48740 699 aa3.27□□□□□ -1.89
KNTC1-213ENST00000542727 PPP3CAQ08209 521 aa3.27□□□□□ -1.89
KNTC1-213ENST00000542727 DACT2Q5SW24 774 aa3.27□□□□□ -1.89
KNTC1-213ENST00000542727 AKNAD1Q5T1N1 836 aa3.27□□□□□ -1.89
KNTC1-213ENST00000542727 C1QL2Q7Z5L3 287 aa3.27□□□□□ -1.89
KNTC1-213ENST00000542727 RNF180Q86T96 592 aa3.27□□□□□ -1.89
KNTC1-213ENST00000542727 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.27□□□□□ -1.89
KNTC1-213ENST00000542727 SCARB1Q8WTV0 552 aa3.27□□□□□ -1.89
KNTC1-213ENST00000542727 FBXO34Q9NWN3 711 aa3.27□□□□□ -1.89
KNTC1-213ENST00000542727 SLC23A1Q9UHI7 598 aa3.27□□□□□ -1.89
KNTC1-213ENST00000542727 USP25Q9UHP3 1055 aa3.27□□□□□ -1.89
KNTC1-213ENST00000542727 SHROOM4Q9ULL8 1493 aa3.27□□□□□ -1.89
KNTC1-213ENST00000542727 AATKQ6ZMQ8 1374 aa3.26□□□□□ -1.89
KNTC1-213ENST00000542727 CADPSQ9ULU8 1353 aa3.26□□□□□ -1.89
KNTC1-213ENST00000542727 SBNO2Q9Y2G9 1366 aa3.26□□□□□ -1.89
KNTC1-213ENST00000542727 DNAJC9-AS1A6NH13 148 aa3.26□□□□□ -1.89
KNTC1-213ENST00000542727 YY2O15391 372 aa3.26□□□□□ -1.89
KNTC1-213ENST00000542727 HAUS5O94927 633 aa3.26□□□□□ -1.89
KNTC1-213ENST00000542727 CPEP16870 476 aa3.26□□□□□ -1.89
KNTC1-213ENST00000542727 CTGFP29279 349 aa3.26□□□□□ -1.89
KNTC1-213ENST00000542727 SOX5P35711 763 aa3.26□□□□□ -1.89
KNTC1-213ENST00000542727 CCT2P78371 535 aaKnown RBP3.26□□□□□ -1.89
KNTC1-213ENST00000542727 CREMQ03060 361 aa3.26□□□□□ -1.89
KNTC1-213ENST00000542727 STRN3Q13033 797 aa3.26□□□□□ -1.89
KNTC1-213ENST00000542727 MTM1Q13496 603 aa3.26□□□□□ -1.89
KNTC1-213ENST00000542727 NOMO1Q15155 1222 aa3.26□□□□□ -1.89
KNTC1-213ENST00000542727 GEN1Q17RS7 908 aa3.26□□□□□ -1.89
KNTC1-213ENST00000542727 CT47A1Q5JQC4 288 aaPredicted RBP3.26□□□□□ -1.89
KNTC1-213ENST00000542727 ZNF788Q6ZQV5 615 aa3.26□□□□□ -1.89
KNTC1-213ENST00000542727 FBXO18Q8NFZ0 1043 aa3.26□□□□□ -1.89
KNTC1-213ENST00000542727 HASPINQ8TF76 798 aa3.26□□□□□ -1.89
KNTC1-213ENST00000542727 SSH1Q8WYL5 1049 aa3.26□□□□□ -1.89
KNTC1-213ENST00000542727 INTS13Q9NVM9 706 aa3.26□□□□□ -1.89
KNTC1-213ENST00000542727 COL3A1P02461 1466 aaPredicted RBP3.26□□□□□ -1.89
KNTC1-213ENST00000542727 PRAMEF33A0A0G2JMD5 474 aa3.25□□□□□ -1.89
KNTC1-213ENST00000542727 LOC105371045A0A1W2PR82 267 aa3.25□□□□□ -1.89
KNTC1-213ENST00000542727 CGB1A6NKQ9 187 aa3.25□□□□□ -1.89
KNTC1-213ENST00000542727 GCOM1H8Y6P7 765 aaPredicted RBP3.25□□□□□ -1.89
KNTC1-213ENST00000542727 PRAMEF10O60809 474 aa3.25□□□□□ -1.89
KNTC1-213ENST00000542727 PRSS23O95084 383 aa3.25□□□□□ -1.89
KNTC1-213ENST00000542727 ZFPL1O95159 310 aa3.25□□□□□ -1.89
KNTC1-213ENST00000542727 FPR1P21462 350 aa3.25□□□□□ -1.89
KNTC1-213ENST00000542727 SLC6A2P23975 617 aa3.25□□□□□ -1.89
KNTC1-213ENST00000542727 GRIA3P42263 894 aa3.25□□□□□ -1.89
KNTC1-213ENST00000542727 ABCG1P45844 678 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms