RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 UBAP2Q5T6F2 1119 aaKnown RBP5.56□□□□□ -1.52
ATPAF1-212ENST00000542495 RNF187Q5TA31 235 aaPredicted RBP5.56□□□□□ -1.52
ATPAF1-212ENST00000542495 GKAP1Q5VSY0 366 aaPredicted RBP5.56□□□□□ -1.52
ATPAF1-212ENST00000542495 KRT39Q6A163 491 aa5.56□□□□□ -1.52
ATPAF1-212ENST00000542495 ACAD10Q6JQN1 1059 aa5.56□□□□□ -1.52
ATPAF1-212ENST00000542495 ZNF746Q6NUN9 644 aaPredicted RBP5.56□□□□□ -1.52
ATPAF1-212ENST00000542495 RNF19BQ6ZMZ0 732 aa5.56□□□□□ -1.52
ATPAF1-212ENST00000542495 CCDC121Q6ZUS5 278 aa5.56□□□□□ -1.52
ATPAF1-212ENST00000542495 TRMT10CQ7L0Y3 403 aaKnown RBP5.56□□□□□ -1.52
ATPAF1-212ENST00000542495 FAM83AQ86UY5 434 aa5.56□□□□□ -1.52
ATPAF1-212ENST00000542495 SLC47A2Q86VL8 602 aa5.56□□□□□ -1.52
ATPAF1-212ENST00000542495 CPNE8Q86YQ8 564 aa5.56□□□□□ -1.52
ATPAF1-212ENST00000542495 CBWD2Q8IUF1 395 aa5.56□□□□□ -1.52
ATPAF1-212ENST00000542495 CACNA2D3Q8IZS8 1091 aa5.56□□□□□ -1.52
ATPAF1-212ENST00000542495 TMEM161BQ8NDZ6 487 aa5.56□□□□□ -1.52
ATPAF1-212ENST00000542495 ZNF564Q8TBZ8 553 aaPredicted RBP5.56□□□□□ -1.52
ATPAF1-212ENST00000542495 MDM1Q8TC05 714 aa5.56□□□□□ -1.52
ATPAF1-212ENST00000542495 SYTL5Q8TDW5 730 aaPredicted RBP5.56□□□□□ -1.52
ATPAF1-212ENST00000542495 CCT6BQ92526 530 aa5.56□□□□□ -1.52
ATPAF1-212ENST00000542495 ZBED3Q96IU2 234 aaPredicted RBP5.56□□□□□ -1.52
ATPAF1-212ENST00000542495 SENP7Q9BQF6 1050 aa5.56□□□□□ -1.52
ATPAF1-212ENST00000542495 NUP85Q9BW27 656 aa5.56□□□□□ -1.52
ATPAF1-212ENST00000542495 GLIS2Q9BZE0 524 aaPredicted RBP5.56□□□□□ -1.52
ATPAF1-212ENST00000542495 ROPN1BQ9BZX4 212 aaPredicted RBP5.56□□□□□ -1.52
ATPAF1-212ENST00000542495 ROPN1Q9HAT0 212 aaPredicted RBP5.56□□□□□ -1.52
ATPAF1-212ENST00000542495 TMEM8AQ9HCN3 771 aa5.56□□□□□ -1.52
ATPAF1-212ENST00000542495 AVENQ9NQS1 362 aaPredicted RBP5.56□□□□□ -1.52
ATPAF1-212ENST00000542495 AAASQ9NRG9 546 aa5.56□□□□□ -1.52
ATPAF1-212ENST00000542495 WHRNQ9P202 907 aa5.56□□□□□ -1.52
ATPAF1-212ENST00000542495 MTRF1LQ9UGC7 380 aaKnown RBP5.56□□□□□ -1.52
ATPAF1-212ENST00000542495 MTUS1Q9ULD2 1270 aa5.56□□□□□ -1.52
ATPAF1-212ENST00000542495 CCPG1Q9ULG6 757 aa5.56□□□□□ -1.52
ATPAF1-212ENST00000542495 TBX20Q9UMR3 447 aa5.56□□□□□ -1.52
ATPAF1-212ENST00000542495 EXOC7Q9UPT5 735 aa5.56□□□□□ -1.52
ATPAF1-212ENST00000542495 BCS1LQ9Y276 419 aa5.56□□□□□ -1.52
ATPAF1-212ENST00000542495 TMEM110-MUSTN1A8MSY1 372 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 PHF20L1A8MW92 1017 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 ARHGAP33O14559 1287 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 WDR46O15213 610 aaKnown RBP5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 SLC16A4O15374 487 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 RGS16O15492 202 aaPredicted RBP5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 PPIP5K2O43314 1243 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 ZC3H11AO75152 810 aaKnown RBP eCLIP5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 DNAJC8O75937 253 aaPredicted RBP5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 STBD1O95210 358 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 CCNE2O96020 404 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 ASNSP08243 561 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 CHN1P15882 459 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 IVDP26440 423 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 CHRNA5P30532 468 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 SFNP31947 248 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 NPTX2P47972 431 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 JAK3P52333 1124 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 GTF2A1P52655 376 aaPredicted RBP5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 PEX3P56589 373 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 PSMC5P62195 406 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 CLDN10P78369 228 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 IFI35P80217 286 aaPredicted RBP5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 GCNT1Q02742 428 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 MAP2K1Q02750 393 aaPredicted RBP5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 PTP4A2Q12974 167 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 XRCC4Q13426 336 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 MTMR1Q13613 665 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 NCOA4Q13772 614 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 AUHQ13825 339 aaKnown RBP5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 ITIH4Q14624 930 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 DLGAP5Q15398 846 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 CLEC16AQ2KHT3 1053 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 SLC39A4Q6P5W5 647 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 BLOC1S3Q6QNY0 202 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 C15orf39Q6ZRI6 1047 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 SYDE1Q6ZW31 735 aaPredicted RBP5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 MIGA2Q7L4E1 593 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 ENOSF1Q7L5Y1 443 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 MAEAQ7L5Y9 396 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 FBXL13Q8NEE6 735 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 RDM1Q8NG50 284 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 TAS1R2Q8TE23 839 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 KCNN1Q92952 543 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 ZNF653Q96CK0 615 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 JPH2Q9BR39 696 aaPredicted RBP5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 STMN4Q9H169 189 aaPredicted RBP5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 TAOK3Q9H2K8 898 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 AZI2Q9H6S1 392 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 YY1AP1Q9H869 796 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 C17orf75Q9HAS0 396 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 SLC38A10Q9HBR0 1119 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 SLC40A1Q9NP59 571 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 ACP6Q9NPH0 428 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 GPRC5CQ9NQ84 441 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 MAP10Q9P2G4 905 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 CHORDC1Q9UHD1 332 aaPredicted RBP5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 PASKQ96RG2 1323 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 COL4A5P29400 1685 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 TMEM150BA6NC51 233 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 GOLGA8IPA6NC78 632 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 CCT8L1PA6NM43 557 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 GOLGA8JA6NMD2 632 aa5.55□□□□□ -1.52
ATPAF1-212ENST00000542495 WDR64B1ANS9 1081 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms