RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 DLGAP2Q9P1A6 1054 aa4.63□□□□□ -1.67
SNHG1-219ENST00000542112 ZNF180Q9UJW8 692 aa4.63□□□□□ -1.67
SNHG1-219ENST00000542112 ZMYND8Q9ULU4 1186 aaPredicted RBP4.63□□□□□ -1.67
SNHG1-219ENST00000542112 PCDHA4Q9UN74 947 aa4.63□□□□□ -1.67
SNHG1-219ENST00000542112 CHMP2BQ9UQN3 213 aa4.63□□□□□ -1.67
SNHG1-219ENST00000542112 APOBEC2Q9Y235 224 aaKnown RBP4.63□□□□□ -1.67
SNHG1-219ENST00000542112 TBC1D30Q9Y2I9 924 aa4.63□□□□□ -1.67
SNHG1-219ENST00000542112 TACC3Q9Y6A5 838 aa4.63□□□□□ -1.67
SNHG1-219ENST00000542112 WDR17Q8IZU2 1322 aa4.63□□□□□ -1.67
SNHG1-219ENST00000542112 QRICH2Q9H0J4 1663 aa4.62□□□□□ -1.67
SNHG1-219ENST00000542112 ANO9A1A5B4 782 aa4.62□□□□□ -1.67
SNHG1-219ENST00000542112 SH3PXD2BA1X283 911 aa4.62□□□□□ -1.67
SNHG1-219ENST00000542112 GTPBP10A4D1E9 387 aaKnown RBP4.62□□□□□ -1.67
SNHG1-219ENST00000542112 FOXN3O00409 490 aaPredicted RBP4.62□□□□□ -1.67
SNHG1-219ENST00000542112 PIK3R2O00459 728 aa4.62□□□□□ -1.67
SNHG1-219ENST00000542112 NDC80O14777 642 aa4.62□□□□□ -1.67
SNHG1-219ENST00000542112 TM4SF5O14894 197 aa4.62□□□□□ -1.67
SNHG1-219ENST00000542112 CASQ2O14958 399 aaPredicted RBP4.62□□□□□ -1.67
SNHG1-219ENST00000542112 HNRNPRO43390 633 aaKnown RBP4.62□□□□□ -1.67
SNHG1-219ENST00000542112 ECE2O60344 883 aa4.62□□□□□ -1.67
SNHG1-219ENST00000542112 RNASEH2AO75792 299 aaKnown RBP4.62□□□□□ -1.67
SNHG1-219ENST00000542112 ALDH1L1O75891 902 aa4.62□□□□□ -1.67
SNHG1-219ENST00000542112 PDE5AO76074 875 aa4.62□□□□□ -1.67
SNHG1-219ENST00000542112 TJP3O95049 919 aa4.62□□□□□ -1.67
SNHG1-219ENST00000542112 ATE1O95260 518 aa4.62□□□□□ -1.67
SNHG1-219ENST00000542112 ESRRBO95718 433 aa4.62□□□□□ -1.67
SNHG1-219ENST00000542112 RPN1P04843 607 aaKnown RBP4.62□□□□□ -1.67
SNHG1-219ENST00000542112 ITGB3P05106 788 aa4.62□□□□□ -1.67
SNHG1-219ENST00000542112 MYZAPP0CAP1 466 aa4.62□□□□□ -1.67
SNHG1-219ENST00000542112 UBTFL6P0CB48 400 aaPredicted RBP4.62□□□□□ -1.67
SNHG1-219ENST00000542112 PRKACBP22694 351 aa4.62□□□□□ -1.67
SNHG1-219ENST00000542112 CD68P34810 354 aaPredicted RBP4.62□□□□□ -1.67
SNHG1-219ENST00000542112 ECE1P42892 770 aa4.62□□□□□ -1.67
SNHG1-219ENST00000542112 PTDSS1P48651 473 aaKnown RBP4.62□□□□□ -1.67
SNHG1-219ENST00000542112 CDK7P50613 346 aa4.62□□□□□ -1.67
SNHG1-219ENST00000542112 PDE6CP51160 858 aa4.62□□□□□ -1.67
SNHG1-219ENST00000542112 VAV2P52735 878 aa4.62□□□□□ -1.67
SNHG1-219ENST00000542112 CACNA2D1P54289 1103 aa4.62□□□□□ -1.67
SNHG1-219ENST00000542112 EIF6P56537 245 aaKnown RBP4.62□□□□□ -1.67
SNHG1-219ENST00000542112 S100A12P80511 92 aa4.62□□□□□ -1.67
SNHG1-219ENST00000542112 KIF23Q02241 960 aaPredicted RBP4.62□□□□□ -1.67
SNHG1-219ENST00000542112 PTPN11Q06124 597 aaPredicted RBP4.62□□□□□ -1.67
SNHG1-219ENST00000542112 GALNT1Q10472 559 aaPredicted RBP4.62□□□□□ -1.67
SNHG1-219ENST00000542112 COL9A3Q14050 684 aaPredicted RBP4.62□□□□□ -1.67
SNHG1-219ENST00000542112 LRP8Q14114 963 aa4.62□□□□□ -1.67
SNHG1-219ENST00000542112 SF3B3Q15393 1217 aaKnown RBP4.62□□□□□ -1.67
SNHG1-219ENST00000542112 ME3Q16798 604 aa4.62□□□□□ -1.67
SNHG1-219ENST00000542112 P3H1Q32P28 736 aa4.62□□□□□ -1.67
SNHG1-219ENST00000542112 SGO2Q562F6 1265 aa4.62□□□□□ -1.67
SNHG1-219ENST00000542112 TRAPPC3LQ5T215 181 aa4.62□□□□□ -1.67
SNHG1-219ENST00000542112 MEX3CQ5U5Q3 659 aaKnown RBP4.62□□□□□ -1.67
SNHG1-219ENST00000542112 AGBL2Q5U5Z8 902 aa4.62□□□□□ -1.67
SNHG1-219ENST00000542112 SLC4A10Q6U841 1118 aa4.62□□□□□ -1.67
SNHG1-219ENST00000542112 TOGARAM2Q6ZUX3 1019 aa4.62□□□□□ -1.67
SNHG1-219ENST00000542112 NET1Q7Z628 596 aaPredicted RBP4.62□□□□□ -1.67
SNHG1-219ENST00000542112 PATL1Q86TB9 770 aaKnown RBP4.62□□□□□ -1.67
SNHG1-219ENST00000542112 ITIH5Q86UX2 942 aa4.62□□□□□ -1.67
SNHG1-219ENST00000542112 PNMA8AQ86V59 439 aaPredicted RBP4.62□□□□□ -1.67
SNHG1-219ENST00000542112 AGGF1Q8N302 714 aaeCLIP4.62□□□□□ -1.67
SNHG1-219ENST00000542112 MMGT1Q8N4V1 131 aa4.62□□□□□ -1.67
SNHG1-219ENST00000542112 LSMEM1Q8N8F7 131 aa4.62□□□□□ -1.67
SNHG1-219ENST00000542112 ANKRD53Q8N9V6 530 aa4.62□□□□□ -1.67
SNHG1-219ENST00000542112 PPFIBP2Q8ND30 876 aa4.62□□□□□ -1.67
SNHG1-219ENST00000542112 SGCDQ92629 289 aa4.62□□□□□ -1.67
SNHG1-219ENST00000542112 GATA6Q92908 595 aa4.62□□□□□ -1.67
SNHG1-219ENST00000542112 PEX13Q92968 403 aa4.62□□□□□ -1.67
SNHG1-219ENST00000542112 EME1Q96AY2 570 aa4.62□□□□□ -1.67
SNHG1-219ENST00000542112 ERP27Q96DN0 273 aa4.62□□□□□ -1.67
SNHG1-219ENST00000542112 ATP6V1G3Q96LB4 118 aa4.62□□□□□ -1.67
SNHG1-219ENST00000542112 TMEM237Q96Q45 408 aa4.62□□□□□ -1.67
SNHG1-219ENST00000542112 WDR24Q96S15 920 aa4.62□□□□□ -1.67
SNHG1-219ENST00000542112 RPS6KC1Q96S38 1066 aa4.62□□□□□ -1.67
SNHG1-219ENST00000542112 TRIM55Q9BYV6 548 aa4.62□□□□□ -1.67
SNHG1-219ENST00000542112 SHCBP1LQ9BZQ2 653 aa4.62□□□□□ -1.67
SNHG1-219ENST00000542112 ZC3H12CQ9C0D7 883 aaKnown RBP4.62□□□□□ -1.67
SNHG1-219ENST00000542112 DNAI2Q9GZS0 605 aa4.62□□□□□ -1.67
SNHG1-219ENST00000542112 OSBPL2Q9H1P3 480 aa4.62□□□□□ -1.67
SNHG1-219ENST00000542112 VPS33BQ9H267 617 aa4.62□□□□□ -1.67
SNHG1-219ENST00000542112 CCDC86Q9H6F5 360 aaKnown RBP4.62□□□□□ -1.67
SNHG1-219ENST00000542112 ZSWIM4Q9H7M6 989 aa4.62□□□□□ -1.67
SNHG1-219ENST00000542112 DCLRE1BQ9H816 532 aa4.62□□□□□ -1.67
SNHG1-219ENST00000542112 C10orf88Q9H8K7 445 aa4.62□□□□□ -1.67
SNHG1-219ENST00000542112 BRD9Q9H8M2 597 aa4.62□□□□□ -1.67
SNHG1-219ENST00000542112 EHMT1Q9H9B1 1298 aa4.62□□□□□ -1.67
SNHG1-219ENST00000542112 MOV10Q9HCE1 1003 aaKnown RBP4.62□□□□□ -1.67
SNHG1-219ENST00000542112 ARHGEF3Q9NR81 526 aa4.62□□□□□ -1.67
SNHG1-219ENST00000542112 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.62□□□□□ -1.67
SNHG1-219ENST00000542112 PPP1R14DQ9NXH3 145 aa4.62□□□□□ -1.67
SNHG1-219ENST00000542112 DDX43Q9NXZ2 648 aaKnown RBP4.62□□□□□ -1.67
SNHG1-219ENST00000542112 KIF17Q9P2E2 1029 aa4.62□□□□□ -1.67
SNHG1-219ENST00000542112 MBD2Q9UBB5 411 aa4.62□□□□□ -1.67
SNHG1-219ENST00000542112 TNFRSF10DQ9UBN6 386 aa4.62□□□□□ -1.67
SNHG1-219ENST00000542112 RNF14Q9UBS8 474 aa4.62□□□□□ -1.67
SNHG1-219ENST00000542112 DBF4Q9UBU7 674 aaPredicted RBP4.62□□□□□ -1.67
SNHG1-219ENST00000542112 TRIM10Q9UDY6 481 aa4.62□□□□□ -1.67
SNHG1-219ENST00000542112 MTRF1LQ9UGC7 380 aaKnown RBP4.62□□□□□ -1.67
SNHG1-219ENST00000542112 PRKAG3Q9UGI9 489 aa4.62□□□□□ -1.67
SNHG1-219ENST00000542112 INTUQ9ULD6 942 aa4.62□□□□□ -1.67
SNHG1-219ENST00000542112 ZNRF3Q9ULT6 936 aa4.62□□□□□ -1.67
SNHG1-219ENST00000542112 MTMR6Q9Y217 621 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms