RNA–Protein interactions for RNA: ENST00000542029.1

VTN-203, Transcript of vitronectin, humanhuman

TSL 3

Gene VTN, Length 501 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-203ENST00000542029 SOX4Q06945 474 aaPredicted RBP12.43□□□□□ -0.42
VTN-203ENST00000542029 SF3A1Q15459 793 aaKnown RBP12.43□□□□□ -0.42
VTN-203ENST00000542029 SLC10A6Q3KNW5 377 aa12.43□□□□□ -0.42
VTN-203ENST00000542029 ARSHQ5FYA8 562 aa12.43□□□□□ -0.42
VTN-203ENST00000542029 VARS2Q5ST30 1063 aaKnown RBP12.43□□□□□ -0.42
VTN-203ENST00000542029 TPGS2Q68CL5 300 aa12.43□□□□□ -0.42
VTN-203ENST00000542029 ZNF280DQ6N043 979 aa12.43□□□□□ -0.42
VTN-203ENST00000542029 MTSS1LQ765P7 747 aa12.43□□□□□ -0.42
VTN-203ENST00000542029 GRASPQ7Z6J2 395 aaPredicted RBP12.43□□□□□ -0.42
VTN-203ENST00000542029 CD302Q8IX05 232 aa12.43□□□□□ -0.42
VTN-203ENST00000542029 SIX5Q8N196 739 aa12.43□□□□□ -0.42
VTN-203ENST00000542029 MYCT1Q8N699 235 aa12.43□□□□□ -0.42
VTN-203ENST00000542029 TMEM105Q8N8V8 129 aa12.43□□□□□ -0.42
VTN-203ENST00000542029 C3orf58Q8NDZ4 430 aa12.43□□□□□ -0.42
VTN-203ENST00000542029 FLCNQ8NFG4 579 aa12.43□□□□□ -0.42
VTN-203ENST00000542029 ZBTB45Q96K62 511 aaPredicted RBP12.43□□□□□ -0.42
VTN-203ENST00000542029 SUSD3Q96L08 255 aa12.43□□□□□ -0.42
VTN-203ENST00000542029 REEP2Q9BRK0 252 aa12.43□□□□□ -0.42
VTN-203ENST00000542029 CCSER1Q9C0I3 900 aa12.43□□□□□ -0.42
VTN-203ENST00000542029 AVENQ9NQS1 362 aaPredicted RBP12.43□□□□□ -0.42
VTN-203ENST00000542029 UBQLN1Q9UMX0 589 aaKnown RBP12.43□□□□□ -0.42
VTN-203ENST00000542029 VPS37CA5D8V6 355 aaPredicted RBP12.42□□□□□ -0.42
VTN-203ENST00000542029 TRAK2O60296 914 aa12.42□□□□□ -0.42
VTN-203ENST00000542029 ABLIM3O94929 683 aa12.42□□□□□ -0.42
VTN-203ENST00000542029 LRG1P02750 347 aa12.42□□□□□ -0.42
VTN-203ENST00000542029 ATF2P15336 505 aa12.42□□□□□ -0.42
VTN-203ENST00000542029 PLCG1P19174 1290 aa12.42□□□□□ -0.42
VTN-203ENST00000542029 MCM4P33991 863 aa12.42□□□□□ -0.42
VTN-203ENST00000542029 DDIT3P35638 169 aa12.42□□□□□ -0.42
VTN-203ENST00000542029 TXLNAP40222 546 aa12.42□□□□□ -0.42
VTN-203ENST00000542029 PPP2R3AQ06190 1150 aa12.42□□□□□ -0.42
VTN-203ENST00000542029 HTR4Q13639 388 aa12.42□□□□□ -0.42
VTN-203ENST00000542029 MRPL58Q14197 206 aaKnown RBP12.42□□□□□ -0.42
VTN-203ENST00000542029 PABPC1LQ4VXU2 614 aaKnown RBP12.42□□□□□ -0.42
VTN-203ENST00000542029 KRI1Q8N9T8 703 aaKnown RBP12.42□□□□□ -0.42
VTN-203ENST00000542029 LARP4BQ92615 738 aaKnown RBP12.42□□□□□ -0.42
VTN-203ENST00000542029 RAD54LQ92698 747 aa12.42□□□□□ -0.42
VTN-203ENST00000542029 INTS4Q96HW7 963 aaKnown RBP12.42□□□□□ -0.42
VTN-203ENST00000542029 SHDQ96IW2 340 aa12.42□□□□□ -0.42
VTN-203ENST00000542029 RPF1Q9H9Y2 349 aaKnown RBP12.42□□□□□ -0.42
VTN-203ENST00000542029 SLC2A4RGQ9NR83 387 aa12.42□□□□□ -0.42
VTN-203ENST00000542029 BLOC1S4Q9NUP1 217 aa12.42□□□□□ -0.42
VTN-203ENST00000542029 CCDC39Q9UFE4 941 aa12.42□□□□□ -0.42
VTN-203ENST00000542029 TBX20Q9UMR3 447 aa12.42□□□□□ -0.42
VTN-203ENST00000542029 NPHP3-ACAD11A0A0J9YXS1 232 aa12.41□□□□□ -0.42
VTN-203ENST00000542029 TTC26A0AVF1 554 aa12.41□□□□□ -0.42
VTN-203ENST00000542029 ARHGEF37A1IGU5 675 aa12.41□□□□□ -0.42
VTN-203ENST00000542029 I3L4J1 428 aa12.41□□□□□ -0.42
VTN-203ENST00000542029 K7ENM7 598 aa12.41□□□□□ -0.42
VTN-203ENST00000542029 STK25O00506 426 aa12.41□□□□□ -0.42
VTN-203ENST00000542029 PRRG1O14668 218 aa12.41□□□□□ -0.42
VTN-203ENST00000542029 OGTO15294 1046 aa12.41□□□□□ -0.42
VTN-203ENST00000542029 TBC1D4O60343 1298 aa12.41□□□□□ -0.42
VTN-203ENST00000542029 LRPAP1P30533 357 aa12.41□□□□□ -0.42
VTN-203ENST00000542029 POU5F1Q01860 360 aaKnown RBP12.41□□□□□ -0.42
VTN-203ENST00000542029 ROR1Q01973 937 aa12.41□□□□□ -0.42
VTN-203ENST00000542029 DHX8Q14562 1220 aaKnown RBP12.41□□□□□ -0.42
VTN-203ENST00000542029 KARSQ15046 597 aaKnown RBP12.41□□□□□ -0.42
VTN-203ENST00000542029 CTXN3Q4LDR2 81 aa12.41□□□□□ -0.42
VTN-203ENST00000542029 CWF19L1Q69YN2 538 aaKnown RBP12.41□□□□□ -0.42
VTN-203ENST00000542029 SLFN12LQ6IEE8 588 aa12.41□□□□□ -0.42
VTN-203ENST00000542029 PHLDB3Q6NSJ2 640 aa12.41□□□□□ -0.42
VTN-203ENST00000542029 RSPO2Q6UXX9 243 aaPredicted RBP12.41□□□□□ -0.42
VTN-203ENST00000542029 TCEAL8Q8IYN2 117 aa12.41□□□□□ -0.42
VTN-203ENST00000542029 RSAD2Q8WXG1 361 aa12.41□□□□□ -0.42
VTN-203ENST00000542029 FGF13Q92913 245 aa12.41□□□□□ -0.42
VTN-203ENST00000542029 C18orf25Q96B23 403 aaPredicted RBP12.41□□□□□ -0.42
VTN-203ENST00000542029 GDE1Q9NZC3 331 aa12.41□□□□□ -0.42
VTN-203ENST00000542029 STK17AQ9UEE5 414 aa12.41□□□□□ -0.42
VTN-203ENST00000542029 PCDHB8Q9UN66 801 aa12.41□□□□□ -0.42
VTN-203ENST00000542029 MRPS23Q9Y3D9 190 aaKnown RBP12.41□□□□□ -0.42
VTN-203ENST00000542029 NUMBLQ9Y6R0 609 aa12.41□□□□□ -0.42
VTN-203ENST00000542029 MYO10Q9HD67 2058 aa12.41□□□□□ -0.42
VTN-203ENST00000542029 PROB1E7EW31 1015 aa12.4□□□□□ -0.42
VTN-203ENST00000542029 H0Y858 1186 aa12.4□□□□□ -0.42
VTN-203ENST00000542029 ZNF197O14709 1029 aa12.4□□□□□ -0.42
VTN-203ENST00000542029 NARSO43776 548 aaKnown RBP12.4□□□□□ -0.42
VTN-203ENST00000542029 CFHP08603 1231 aa12.4□□□□□ -0.42
VTN-203ENST00000542029 CXCL8P10145 99 aa12.4□□□□□ -0.42
VTN-203ENST00000542029 NPR3P17342 541 aa12.4□□□□□ -0.42
VTN-203ENST00000542029 PTPN2P17706 415 aa12.4□□□□□ -0.42
VTN-203ENST00000542029 IGFBP6P24592 240 aaPredicted RBP12.4□□□□□ -0.42
VTN-203ENST00000542029 GTF2BQ00403 316 aa12.4□□□□□ -0.42
VTN-203ENST00000542029 PFKPQ01813 784 aa12.4□□□□□ -0.42
VTN-203ENST00000542029 CACNB1Q02641 598 aaPredicted RBP12.4□□□□□ -0.42
VTN-203ENST00000542029 MCM6Q14566 821 aa12.4□□□□□ -0.42
VTN-203ENST00000542029 ZBTB6Q15916 424 aa12.4□□□□□ -0.42
VTN-203ENST00000542029 IQCEQ6IPM2 695 aa12.4□□□□□ -0.42
VTN-203ENST00000542029 USP37Q86T82 979 aa12.4□□□□□ -0.42
VTN-203ENST00000542029 MAP4K3Q8IVH8 894 aa12.4□□□□□ -0.42
VTN-203ENST00000542029 CCDC105Q8IYK2 499 aa12.4□□□□□ -0.42
VTN-203ENST00000542029 ELMOD1Q8N336 334 aa12.4□□□□□ -0.42
VTN-203ENST00000542029 LEMD2Q8NC56 503 aa12.4□□□□□ -0.42
VTN-203ENST00000542029 DDX12PQ92771 950 aa12.4□□□□□ -0.42
VTN-203ENST00000542029 KIF12Q96FN5 646 aa12.4□□□□□ -0.42
VTN-203ENST00000542029 MSTO1Q9BUK6 570 aa12.4□□□□□ -0.42
VTN-203ENST00000542029 ST6GALNAC4Q9H4F1 302 aa12.4□□□□□ -0.42
VTN-203ENST00000542029 ZHX3Q9H4I2 956 aa12.4□□□□□ -0.42
VTN-203ENST00000542029 CYP4F11Q9HBI6 524 aa12.4□□□□□ -0.42
VTN-203ENST00000542029 ARHGEF3Q9NR81 526 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms