RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 LACRTQ9GZZ8 138 aa9.35□□□□□ -0.91
THBS3-210ENST00000541576 HAUS4Q9H6D7 363 aa9.35□□□□□ -0.91
THBS3-210ENST00000541576 PUF60Q9UHX1 559 aaKnown RBP9.35□□□□□ -0.91
THBS3-210ENST00000541576 FOXN3O00409 490 aaPredicted RBP9.35□□□□□ -0.91
THBS3-210ENST00000541576 B4GALT4O60513 344 aa9.35□□□□□ -0.91
THBS3-210ENST00000541576 GFPT2O94808 682 aa9.35□□□□□ -0.91
THBS3-210ENST00000541576 AXLP30530 894 aa9.35□□□□□ -0.91
THBS3-210ENST00000541576 PRKCIP41743 596 aa9.35□□□□□ -0.91
THBS3-210ENST00000541576 GNG11P61952 73 aa9.35□□□□□ -0.91
THBS3-210ENST00000541576 POU5F1Q01860 360 aaKnown RBP9.35□□□□□ -0.91
THBS3-210ENST00000541576 PTK2Q05397 1052 aa9.35□□□□□ -0.91
THBS3-210ENST00000541576 GFPT1Q06210 699 aaPredicted RBP9.35□□□□□ -0.91
THBS3-210ENST00000541576 SPA17Q15506 151 aa9.35□□□□□ -0.91
THBS3-210ENST00000541576 DUOXA2Q1HG44 320 aa9.35□□□□□ -0.91
THBS3-210ENST00000541576 WDR44Q5JSH3 913 aa9.35□□□□□ -0.91
THBS3-210ENST00000541576 SLC27A1Q6PCB7 646 aa9.35□□□□□ -0.91
THBS3-210ENST00000541576 WDR24Q96S15 920 aa9.35□□□□□ -0.91
THBS3-210ENST00000541576 TSEN34Q9BSV6 310 aaKnown RBP9.35□□□□□ -0.91
THBS3-210ENST00000541576 PI4K2AQ9BTU6 479 aa9.35□□□□□ -0.91
THBS3-210ENST00000541576 MTMR12Q9C0I1 747 aa9.35□□□□□ -0.91
THBS3-210ENST00000541576 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.35□□□□□ -0.91
THBS3-210ENST00000541576 TRPV2Q9Y5S1 764 aa9.35□□□□□ -0.91
THBS3-210ENST00000541576 LCA5LO95447 670 aa9.34□□□□□ -0.91
THBS3-210ENST00000541576 VNN1O95497 513 aa9.34□□□□□ -0.91
THBS3-210ENST00000541576 NPTXRO95502 500 aa9.34□□□□□ -0.91
THBS3-210ENST00000541576 TMEM191BP0C7N4 346 aa9.34□□□□□ -0.91
THBS3-210ENST00000541576 CCDC172P0C7W6 258 aa9.34□□□□□ -0.91
THBS3-210ENST00000541576 MFAP3P55082 362 aa9.34□□□□□ -0.91
THBS3-210ENST00000541576 TFAMQ00059 246 aaKnown RBP9.34□□□□□ -0.91
THBS3-210ENST00000541576 PPARDQ03181 441 aa9.34□□□□□ -0.91
THBS3-210ENST00000541576 FOXR1Q6PIV2 292 aa9.34□□□□□ -0.91
THBS3-210ENST00000541576 ZNF571Q7Z3V5 609 aaPredicted RBP9.34□□□□□ -0.91
THBS3-210ENST00000541576 ARRDC4Q8NCT1 418 aa9.34□□□□□ -0.91
THBS3-210ENST00000541576 HELQQ8TDG4 1101 aa9.34□□□□□ -0.91
THBS3-210ENST00000541576 TATDN2Q93075 761 aa9.34□□□□□ -0.91
THBS3-210ENST00000541576 WNT8BQ93098 351 aa9.34□□□□□ -0.91
THBS3-210ENST00000541576 KREMEN1Q96MU8 473 aa9.34□□□□□ -0.91
THBS3-210ENST00000541576 C1orf112Q9NSG2 853 aa9.34□□□□□ -0.91
THBS3-210ENST00000541576 WBP1LQ9NX94 342 aa9.34□□□□□ -0.91
THBS3-210ENST00000541576 PIN4Q9Y237 131 aaKnown RBP9.34□□□□□ -0.91
THBS3-210ENST00000541576 NOD1Q9Y239 953 aa9.34□□□□□ -0.91
THBS3-210ENST00000541576 PTPN22Q9Y2R2 807 aa9.34□□□□□ -0.91
THBS3-210ENST00000541576 CDY2AQ9Y6F7 541 aa9.34□□□□□ -0.91
THBS3-210ENST00000541576 MROH7Q68CQ1 1323 aa9.34□□□□□ -0.91
THBS3-210ENST00000541576 A0A087X0T9 212 aa9.34□□□□□ -0.91
THBS3-210ENST00000541576 EVI5O60447 810 aa9.34□□□□□ -0.91
THBS3-210ENST00000541576 SASH3O75995 380 aa9.34□□□□□ -0.91
THBS3-210ENST00000541576 CTSHP09668 335 aa9.34□□□□□ -0.91
THBS3-210ENST00000541576 FAM228BP0C875 321 aa9.34□□□□□ -0.91
THBS3-210ENST00000541576 NCOA4Q13772 614 aa9.34□□□□□ -0.91
THBS3-210ENST00000541576 TRAPPC11Q7Z392 1133 aa9.34□□□□□ -0.91
THBS3-210ENST00000541576 RPAINQ86UA6 219 aa9.34□□□□□ -0.91
THBS3-210ENST00000541576 EFCAB13Q8IY85 973 aa9.34□□□□□ -0.91
THBS3-210ENST00000541576 ANKRD36BP1Q96IX9 119 aa9.34□□□□□ -0.91
THBS3-210ENST00000541576 ACAP3Q96P50 834 aa9.34□□□□□ -0.91
THBS3-210ENST00000541576 HINFPQ9BQA5 517 aa9.34□□□□□ -0.91
THBS3-210ENST00000541576 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.34□□□□□ -0.91
THBS3-210ENST00000541576 TRIM6Q9C030 488 aaPredicted RBP9.34□□□□□ -0.91
THBS3-210ENST00000541576 ASB7Q9H672 318 aa9.34□□□□□ -0.91
THBS3-210ENST00000541576 ADAMTS1Q9UHI8 967 aa9.34□□□□□ -0.91
THBS3-210ENST00000541576 DUSP10Q9Y6W6 482 aa9.34□□□□□ -0.91
THBS3-210ENST00000541576 LACTBL1A8MY62 500 aa9.33□□□□□ -0.92
THBS3-210ENST00000541576 KIF2AO00139 706 aaPredicted RBP9.33□□□□□ -0.92
THBS3-210ENST00000541576 MEFVO15553 781 aaPredicted RBP9.33□□□□□ -0.92
THBS3-210ENST00000541576 CLSTN1O94985 981 aa9.33□□□□□ -0.92
THBS3-210ENST00000541576 TNNC2P02585 160 aa9.33□□□□□ -0.92
THBS3-210ENST00000541576 GRM5P41594 1212 aa9.33□□□□□ -0.92
THBS3-210ENST00000541576 GCNT1Q02742 428 aa9.33□□□□□ -0.92
THBS3-210ENST00000541576 PTPN11Q06124 597 aaPredicted RBP9.33□□□□□ -0.92
THBS3-210ENST00000541576 KIAA1328Q86T90 577 aa9.33□□□□□ -0.92
THBS3-210ENST00000541576 FAM81BQ96LP2 452 aa9.33□□□□□ -0.92
THBS3-210ENST00000541576 EIF2AQ9BY44 585 aaKnown RBP9.33□□□□□ -0.92
THBS3-210ENST00000541576 IMPG2Q9BZV3 1241 aa9.33□□□□□ -0.92
THBS3-210ENST00000541576 PCDHA13Q9Y5I0 950 aa9.33□□□□□ -0.92
THBS3-210ENST00000541576 ANK1P16157 1881 aa9.33□□□□□ -0.92
THBS3-210ENST00000541576 THPOP40225 353 aa9.33□□□□□ -0.92
THBS3-210ENST00000541576 SLC10A6Q3KNW5 377 aa9.33□□□□□ -0.92
THBS3-210ENST00000541576 VPS36Q86VN1 386 aa9.33□□□□□ -0.92
THBS3-210ENST00000541576 OLIG1Q8TAK6 271 aa9.33□□□□□ -0.92
THBS3-210ENST00000541576 GDAP1L1Q96MZ0 367 aa9.33□□□□□ -0.92
THBS3-210ENST00000541576 SENP6Q9GZR1 1112 aaPredicted RBP9.33□□□□□ -0.92
THBS3-210ENST00000541576 UNC93B1Q9H1C4 597 aa9.33□□□□□ -0.92
THBS3-210ENST00000541576 TRMT13Q9NUP7 481 aaKnown RBP9.33□□□□□ -0.92
THBS3-210ENST00000541576 NOC2LQ9Y3T9 749 aaKnown RBP9.33□□□□□ -0.92
THBS3-210ENST00000541576 CITO14578 2027 aa9.33□□□□□ -0.92
THBS3-210ENST00000541576 A0A1W2PQ45 241 aaPredicted RBP9.33□□□□□ -0.92
THBS3-210ENST00000541576 A0A1W2PQY0 241 aa9.33□□□□□ -0.92
THBS3-210ENST00000541576 TFRCP02786 760 aaKnown RBP9.33□□□□□ -0.92
THBS3-210ENST00000541576 NFICP08651 508 aa9.33□□□□□ -0.92
THBS3-210ENST00000541576 ANXA13P27216 316 aa9.33□□□□□ -0.92
THBS3-210ENST00000541576 USP8P40818 1118 aa9.33□□□□□ -0.92
THBS3-210ENST00000541576 PTK7Q13308 1070 aa9.33□□□□□ -0.92
THBS3-210ENST00000541576 TRPC3Q13507 836 aa9.33□□□□□ -0.92
THBS3-210ENST00000541576 SLC18A3Q16572 532 aa9.33□□□□□ -0.92
THBS3-210ENST00000541576 ENOSF1Q7L5Y1 443 aa9.33□□□□□ -0.92
THBS3-210ENST00000541576 FAM228AQ86W67 206 aa9.33□□□□□ -0.92
THBS3-210ENST00000541576 TXLNBQ8N3L3 684 aa9.33□□□□□ -0.92
THBS3-210ENST00000541576 SHC3Q92529 594 aa9.33□□□□□ -0.92
THBS3-210ENST00000541576 IFIH1Q9BYX4 1025 aaKnown RBP9.33□□□□□ -0.92
THBS3-210ENST00000541576 STARD7Q9NQZ5 370 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms