RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 APOBEC3GQ9HC16 384 aaKnown RBP16.01■□□□□ 0.15
VARS2-211ENST00000541562 UBIAD1Q9Y5Z9 338 aa16.01■□□□□ 0.15
VARS2-211ENST00000541562 CTNNA2P26232 953 aa16.01■□□□□ 0.15
VARS2-211ENST00000541562 MCF2L2Q86YR7 1114 aa16.01■□□□□ 0.15
VARS2-211ENST00000541562 MSL3Q8N5Y2 521 aaKnown RBP16.01■□□□□ 0.15
VARS2-211ENST00000541562 COPS5Q92905 334 aa16.01■□□□□ 0.15
VARS2-211ENST00000541562 SYT11Q9BT88 431 aa16.01■□□□□ 0.15
VARS2-211ENST00000541562 TMEM120BA0PK00 339 aa16.01■□□□□ 0.15
VARS2-211ENST00000541562 LRRD1A4D1F6 860 aa16.01■□□□□ 0.15
VARS2-211ENST00000541562 CETPP11597 493 aa16.01■□□□□ 0.15
VARS2-211ENST00000541562 CDR2Q01850 454 aa16.01■□□□□ 0.15
VARS2-211ENST00000541562 TTLL12Q14166 644 aaPredicted RBP16.01■□□□□ 0.15
VARS2-211ENST00000541562 NHSQ6T4R5 1651 aa16.01■□□□□ 0.15
VARS2-211ENST00000541562 TAS1R3Q7RTX0 852 aa16.01■□□□□ 0.15
VARS2-211ENST00000541562 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.01■□□□□ 0.15
VARS2-211ENST00000541562 HVCN1Q96D96 273 aa16.01■□□□□ 0.15
VARS2-211ENST00000541562 A1CFQ9NQ94 594 aaKnown RBP16.01■□□□□ 0.15
VARS2-211ENST00000541562 NUB1Q9Y5A7 615 aa16.01■□□□□ 0.15
VARS2-211ENST00000541562 TRAPPC3O43617 180 aa16■□□□□ 0.15
VARS2-211ENST00000541562 HSD17B4P51659 736 aa16■□□□□ 0.15
VARS2-211ENST00000541562 MTMR3Q13615 1198 aa16■□□□□ 0.15
VARS2-211ENST00000541562 GPD1LQ8N335 351 aa16■□□□□ 0.15
VARS2-211ENST00000541562 PRCCQ92733 491 aaPredicted RBP16■□□□□ 0.15
VARS2-211ENST00000541562 NAP1L3Q99457 506 aaPredicted RBP16■□□□□ 0.15
VARS2-211ENST00000541562 SLC9A2Q9UBY0 812 aa16■□□□□ 0.15
VARS2-211ENST00000541562 RIPK2O43353 540 aa16■□□□□ 0.15
VARS2-211ENST00000541562 GTF2H1P32780 548 aa16■□□□□ 0.15
VARS2-211ENST00000541562 GADL1Q6ZQY3 521 aa16■□□□□ 0.15
VARS2-211ENST00000541562 KIFAP3Q92845 792 aa16■□□□□ 0.15
VARS2-211ENST00000541562 TMEM121Q9BTD3 319 aa16■□□□□ 0.15
VARS2-211ENST00000541562 PNMA3Q9UL41 463 aa16■□□□□ 0.15
VARS2-211ENST00000541562 SYNGAP1Q96PV0 1343 aa16■□□□□ 0.15
VARS2-211ENST00000541562 PASKQ96RG2 1323 aa16■□□□□ 0.15
VARS2-211ENST00000541562 A8MUI8 341 aa16■□□□□ 0.15
VARS2-211ENST00000541562 GTF2BQ00403 316 aa16■□□□□ 0.15
VARS2-211ENST00000541562 P3H1Q32P28 736 aa16■□□□□ 0.15
VARS2-211ENST00000541562 PCNX4Q63HM2 1172 aa16■□□□□ 0.15
VARS2-211ENST00000541562 GMLQ99445 158 aa16■□□□□ 0.15
VARS2-211ENST00000541562 SAYSD1Q9NPB0 183 aa16■□□□□ 0.15
VARS2-211ENST00000541562 CYP26B1Q9NR63 512 aa16■□□□□ 0.15
VARS2-211ENST00000541562 INO80B-WBP1J3KQ70 363 aa15.99■□□□□ 0.15
VARS2-211ENST00000541562 ATF2P15336 505 aa15.99■□□□□ 0.15
VARS2-211ENST00000541562 TNFRSF8P28908 595 aa15.99■□□□□ 0.15
VARS2-211ENST00000541562 SHC3Q92529 594 aa15.99■□□□□ 0.15
VARS2-211ENST00000541562 CHMP6Q96FZ7 201 aa15.99■□□□□ 0.15
VARS2-211ENST00000541562 INO80BQ9C086 356 aaPredicted RBP15.99■□□□□ 0.15
VARS2-211ENST00000541562 SLC40A1Q9NP59 571 aa15.99■□□□□ 0.15
VARS2-211ENST00000541562 TBC1D22BQ9NU19 505 aa15.99■□□□□ 0.15
VARS2-211ENST00000541562 NENFQ9UMX5 172 aa15.99■□□□□ 0.15
VARS2-211ENST00000541562 L3MBTL1Q9Y468 752 aa15.99■□□□□ 0.15
VARS2-211ENST00000541562 MPP2Q14168 576 aa15.99■□□□□ 0.15
VARS2-211ENST00000541562 RAB6CQ53S08 254 aa15.99■□□□□ 0.15
VARS2-211ENST00000541562 ACAD10Q6JQN1 1059 aa15.99■□□□□ 0.15
VARS2-211ENST00000541562 EXOC3L1Q86VI1 746 aa15.99■□□□□ 0.15
VARS2-211ENST00000541562 RAB6CQ9H0N0 254 aa15.99■□□□□ 0.15
VARS2-211ENST00000541562 TMEM8AQ9HCN3 771 aa15.99■□□□□ 0.15
VARS2-211ENST00000541562 MAGED2Q9UNF1 606 aaPredicted RBP15.99■□□□□ 0.15
VARS2-211ENST00000541562 CEP83Q9Y592 693 aa15.99■□□□□ 0.15
VARS2-211ENST00000541562 NCANO14594 1321 aa15.99■□□□□ 0.15
VARS2-211ENST00000541562 MROH7Q68CQ1 1323 aa15.99■□□□□ 0.15
VARS2-211ENST00000541562 UPP2O95045 317 aa15.98■□□□□ 0.15
VARS2-211ENST00000541562 BRAFP15056 766 aa15.98■□□□□ 0.15
VARS2-211ENST00000541562 MYL6P60660 151 aa15.98■□□□□ 0.15
VARS2-211ENST00000541562 RNASELQ05823 741 aaKnown RBP15.98■□□□□ 0.15
VARS2-211ENST00000541562 EMC2Q15006 297 aa15.98■□□□□ 0.15
VARS2-211ENST00000541562 ICE2Q659A1 982 aa15.98■□□□□ 0.15
VARS2-211ENST00000541562 HOOK3Q86VS8 718 aa15.98■□□□□ 0.15
VARS2-211ENST00000541562 RHPN2Q8IUC4 686 aa15.98■□□□□ 0.15
VARS2-211ENST00000541562 TMEM192Q8IY95 271 aa15.98■□□□□ 0.15
VARS2-211ENST00000541562 MREGQ8N565 214 aa15.98■□□□□ 0.15
VARS2-211ENST00000541562 SYNCQ9H7C4 482 aa15.98■□□□□ 0.15
VARS2-211ENST00000541562 NR2E3Q9Y5X4 410 aa15.98■□□□□ 0.15
VARS2-211ENST00000541562 A0A0A6YYK5 440 aaPredicted RBP15.98■□□□□ 0.15
VARS2-211ENST00000541562 CHRNA3P32297 505 aa15.98■□□□□ 0.15
VARS2-211ENST00000541562 TMEM62Q0P6H9 643 aa15.98■□□□□ 0.15
VARS2-211ENST00000541562 AUHQ13825 339 aaKnown RBP15.98■□□□□ 0.15
VARS2-211ENST00000541562 FAXCQ5TGI0 409 aa15.98■□□□□ 0.15
VARS2-211ENST00000541562 MICALCLQ6ZW33 695 aa15.98■□□□□ 0.15
VARS2-211ENST00000541562 RBBP8NLQ8NC74 664 aaPredicted RBP15.98■□□□□ 0.15
VARS2-211ENST00000541562 TRPM4Q8TD43 1214 aa15.98■□□□□ 0.15
VARS2-211ENST00000541562 TAOK3Q9H2K8 898 aa15.98■□□□□ 0.15
VARS2-211ENST00000541562 DNPEPQ9ULA0 475 aa15.98■□□□□ 0.15
VARS2-211ENST00000541562 POLIQ9UNA4 740 aa15.98■□□□□ 0.15
VARS2-211ENST00000541562 EXOC7Q9UPT5 735 aa15.98■□□□□ 0.15
VARS2-211ENST00000541562 PDE4DIPQ5VU43 2346 aa15.98■□□□□ 0.15
VARS2-211ENST00000541562 MKI67P46013 3256 aaKnown RBP15.98■□□□□ 0.15
VARS2-211ENST00000541562 COL4A5P29400 1685 aa15.98■□□□□ 0.15
VARS2-211ENST00000541562 SGK1O00141 431 aa15.98■□□□□ 0.15
VARS2-211ENST00000541562 PLSCR1O15162 318 aa15.98■□□□□ 0.15
VARS2-211ENST00000541562 B4GALT5O43286 388 aa15.98■□□□□ 0.15
VARS2-211ENST00000541562 KRT1P04264 644 aa15.98■□□□□ 0.15
VARS2-211ENST00000541562 KRT15P19012 456 aa15.98■□□□□ 0.15
VARS2-211ENST00000541562 CCND2P30279 289 aa15.98■□□□□ 0.15
VARS2-211ENST00000541562 TAF5Q15542 800 aa15.98■□□□□ 0.15
VARS2-211ENST00000541562 IZUMO3Q5VZ72 239 aa15.98■□□□□ 0.15
VARS2-211ENST00000541562 AEBP2Q6ZN18 517 aaPredicted RBP15.98■□□□□ 0.15
VARS2-211ENST00000541562 MCOLN2Q8IZK6 566 aa15.98■□□□□ 0.15
VARS2-211ENST00000541562 SLC17A8Q8NDX2 589 aa15.98■□□□□ 0.15
VARS2-211ENST00000541562 IVNS1ABPQ9Y6Y0 642 aa15.98■□□□□ 0.15
VARS2-211ENST00000541562 WDR46O15213 610 aaKnown RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms