RNA–Protein interactions for RNA: ENST00000541280.1

SUDS3-202, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-202ENST00000541280 TRAF6Q9Y4K3 522 aa6.85□□□□□ -1.31
SUDS3-202ENST00000541280 ZHX2Q9Y6X8 837 aa6.85□□□□□ -1.31
SUDS3-202ENST00000541280 SCN9AQ15858 1988 aa6.84□□□□□ -1.31
SUDS3-202ENST00000541280 ZNF536O15090 1300 aa6.84□□□□□ -1.31
SUDS3-202ENST00000541280 C19orf81C9J6K1 198 aa6.84□□□□□ -1.31
SUDS3-202ENST00000541280 ARVCFO00192 962 aa6.84□□□□□ -1.31
SUDS3-202ENST00000541280 ERC2O15083 957 aa6.84□□□□□ -1.31
SUDS3-202ENST00000541280 TLR2O60603 784 aa6.84□□□□□ -1.31
SUDS3-202ENST00000541280 ZFYP08048 801 aaPredicted RBP6.84□□□□□ -1.31
SUDS3-202ENST00000541280 ASNSP08243 561 aa6.84□□□□□ -1.31
SUDS3-202ENST00000541280 NAT1P18440 290 aa6.84□□□□□ -1.31
SUDS3-202ENST00000541280 PRMT2P55345 433 aa6.84□□□□□ -1.31
SUDS3-202ENST00000541280 PFKPQ01813 784 aa6.84□□□□□ -1.31
SUDS3-202ENST00000541280 SSRP1Q08945 709 aaKnown RBP6.84□□□□□ -1.31
SUDS3-202ENST00000541280 PABPC4Q13310 644 aaKnown RBP eCLIP6.84□□□□□ -1.31
SUDS3-202ENST00000541280 CRHR2Q13324 411 aa6.84□□□□□ -1.31
SUDS3-202ENST00000541280 UBE3CQ15386 1083 aa6.84□□□□□ -1.31
SUDS3-202ENST00000541280 GPR19Q15760 415 aa6.84□□□□□ -1.31
SUDS3-202ENST00000541280 FOXB2Q5VYV0 432 aa6.84□□□□□ -1.31
SUDS3-202ENST00000541280 FBXO46Q6PJ61 603 aaPredicted RBP6.84□□□□□ -1.31
SUDS3-202ENST00000541280 ARHGEF18Q6ZSZ5 1173 aa6.84□□□□□ -1.31
SUDS3-202ENST00000541280 Q6ZUG5 572 aa6.84□□□□□ -1.31
SUDS3-202ENST00000541280 LIMS2Q7Z4I7 341 aa6.84□□□□□ -1.31
SUDS3-202ENST00000541280 REXO1L1PQ8IX06 675 aa6.84□□□□□ -1.31
SUDS3-202ENST00000541280 AMOTL1Q8IY63 956 aa6.84□□□□□ -1.31
SUDS3-202ENST00000541280 DNERQ8NFT8 737 aa6.84□□□□□ -1.31
SUDS3-202ENST00000541280 SH3RF3Q8TEJ3 882 aaPredicted RBP6.84□□□□□ -1.31
SUDS3-202ENST00000541280 C8orf49Q96NF6 230 aa6.84□□□□□ -1.31
SUDS3-202ENST00000541280 CRNKL1Q9BZJ0 848 aaKnown RBP6.84□□□□□ -1.31
SUDS3-202ENST00000541280 DDX4Q9NQI0 724 aaKnown RBP6.84□□□□□ -1.31
SUDS3-202ENST00000541280 PIH1D3Q9NQM4 214 aaKnown RBP6.84□□□□□ -1.31
SUDS3-202ENST00000541280 ATP8A2Q9NTI2 1148 aa6.84□□□□□ -1.31
SUDS3-202ENST00000541280 ECHDC1Q9NTX5 307 aa6.84□□□□□ -1.31
SUDS3-202ENST00000541280 PAG1Q9NWQ8 432 aa6.84□□□□□ -1.31
SUDS3-202ENST00000541280 ZFP69BQ9UJL9 534 aa6.84□□□□□ -1.31
SUDS3-202ENST00000541280 SRPK3Q9UPE1 567 aa6.84□□□□□ -1.31
SUDS3-202ENST00000541280 AFG3L2Q9Y4W6 797 aa6.84□□□□□ -1.31
SUDS3-202ENST00000541280 MYH3P11055 1940 aa6.84□□□□□ -1.32
SUDS3-202ENST00000541280 SSC5DA1L4H1 1573 aa6.83□□□□□ -1.32
SUDS3-202ENST00000541280 CCDC85CA6NKD9 419 aa6.83□□□□□ -1.32
SUDS3-202ENST00000541280 BTBD19C9JJ37 291 aa6.83□□□□□ -1.32
SUDS3-202ENST00000541280 GOLIM4O00461 696 aa6.83□□□□□ -1.32
SUDS3-202ENST00000541280 INSRRP14616 1297 aa6.83□□□□□ -1.32
SUDS3-202ENST00000541280 CAPN2P17655 700 aa6.83□□□□□ -1.32
SUDS3-202ENST00000541280 RGS19P49795 217 aa6.83□□□□□ -1.32
SUDS3-202ENST00000541280 RBL2Q08999 1139 aa6.83□□□□□ -1.32
SUDS3-202ENST00000541280 HDAC1Q13547 482 aaPredicted RBP6.83□□□□□ -1.32
SUDS3-202ENST00000541280 ZC3H12BQ5HYM0 836 aaKnown RBP6.83□□□□□ -1.32
SUDS3-202ENST00000541280 SLFN13Q68D06 897 aa6.83□□□□□ -1.32
SUDS3-202ENST00000541280 NLGN4XQ8N0W4 816 aa6.83□□□□□ -1.32
SUDS3-202ENST00000541280 FAM43AQ8N2R8 423 aa6.83□□□□□ -1.32
SUDS3-202ENST00000541280 PCDH19Q8TAB3 1148 aa6.83□□□□□ -1.32
SUDS3-202ENST00000541280 DVL3Q92997 716 aaPredicted RBP6.83□□□□□ -1.32
SUDS3-202ENST00000541280 EXOC2Q96KP1 924 aa6.83□□□□□ -1.32
SUDS3-202ENST00000541280 PARK7Q99497 189 aaKnown RBP6.83□□□□□ -1.32
SUDS3-202ENST00000541280 DNAJC2Q99543 621 aaKnown RBP6.83□□□□□ -1.32
SUDS3-202ENST00000541280 CDC6Q99741 560 aa6.83□□□□□ -1.32
SUDS3-202ENST00000541280 KATNBL1Q9H079 304 aa6.83□□□□□ -1.32
SUDS3-202ENST00000541280 BOLA2Q9H3K6 86 aa6.83□□□□□ -1.32
SUDS3-202ENST00000541280 RWDD1Q9H446 243 aaPredicted RBP6.83□□□□□ -1.32
SUDS3-202ENST00000541280 CD248Q9HCU0 757 aa6.83□□□□□ -1.32
SUDS3-202ENST00000541280 ARHGAP20Q9P2F6 1191 aa6.83□□□□□ -1.32
SUDS3-202ENST00000541280 SERPINB13Q9UIV8 391 aa6.83□□□□□ -1.32
SUDS3-202ENST00000541280 COL2A1P02458 1487 aaPredicted RBP6.83□□□□□ -1.32
SUDS3-202ENST00000541280 RFX7Q2KHR2 1363 aa6.82□□□□□ -1.32
SUDS3-202ENST00000541280 FLT1P17948 1338 aa6.82□□□□□ -1.32
SUDS3-202ENST00000541280 TTC41PQ6P2S7 1318 aa6.82□□□□□ -1.32
SUDS3-202ENST00000541280 CEP350Q5VT06 3117 aa6.82□□□□□ -1.32
SUDS3-202ENST00000541280 PDHXO00330 501 aa6.82□□□□□ -1.32
SUDS3-202ENST00000541280 GPR42O15529 346 aa6.82□□□□□ -1.32
SUDS3-202ENST00000541280 GLRX3O76003 335 aaKnown RBP6.82□□□□□ -1.32
SUDS3-202ENST00000541280 IL18BPO95998 194 aa6.82□□□□□ -1.32
SUDS3-202ENST00000541280 PDE6AP16499 860 aa6.82□□□□□ -1.32
SUDS3-202ENST00000541280 TNFRSF1AP19438 455 aa6.82□□□□□ -1.32
SUDS3-202ENST00000541280 GABREP78334 506 aa6.82□□□□□ -1.32
SUDS3-202ENST00000541280 DBPQ10586 325 aaPredicted RBP6.82□□□□□ -1.32
SUDS3-202ENST00000541280 FIGNQ5HY92 759 aa6.82□□□□□ -1.32
SUDS3-202ENST00000541280 FAM209AQ5JX71 171 aa6.82□□□□□ -1.32
SUDS3-202ENST00000541280 TATDN1Q6P1N9 297 aa6.82□□□□□ -1.32
SUDS3-202ENST00000541280 GIMAP6Q6P9H5 292 aa6.82□□□□□ -1.32
SUDS3-202ENST00000541280 MAPKAPK5Q8IW41 473 aa6.82□□□□□ -1.32
SUDS3-202ENST00000541280 FBXW5Q969U6 566 aa6.82□□□□□ -1.32
SUDS3-202ENST00000541280 CCDC17Q96LX7 622 aa6.82□□□□□ -1.32
SUDS3-202ENST00000541280 RIOK1Q9BRS2 568 aaKnown RBP6.82□□□□□ -1.32
SUDS3-202ENST00000541280 CD244Q9BZW8 370 aa6.82□□□□□ -1.32
SUDS3-202ENST00000541280 MEGF9Q9H1U4 602 aa6.82□□□□□ -1.32
SUDS3-202ENST00000541280 CABP5Q9NP86 173 aa6.82□□□□□ -1.32
SUDS3-202ENST00000541280 TMOD4Q9NZQ9 345 aa6.82□□□□□ -1.32
SUDS3-202ENST00000541280 SWAP70Q9UH65 585 aa6.82□□□□□ -1.32
SUDS3-202ENST00000541280 PFDN2Q9UHV9 154 aa6.82□□□□□ -1.32
SUDS3-202ENST00000541280 TRIM17Q9Y577 477 aa6.82□□□□□ -1.32
SUDS3-202ENST00000541280 ZNF532Q9HCE3 1301 aa6.81□□□□□ -1.32
SUDS3-202ENST00000541280 THSD7BQ9C0I4 1608 aa6.81□□□□□ -1.32
SUDS3-202ENST00000541280 NPEPPSL1A6NEC2 478 aa6.81□□□□□ -1.32
SUDS3-202ENST00000541280 FBXO21O94952 628 aa6.81□□□□□ -1.32
SUDS3-202ENST00000541280 GNAT2P19087 354 aa6.81□□□□□ -1.32
SUDS3-202ENST00000541280 CSF2RBP32927 897 aa6.81□□□□□ -1.32
SUDS3-202ENST00000541280 GJA4P35212 333 aa6.81□□□□□ -1.32
SUDS3-202ENST00000541280 ADD2P35612 726 aa6.81□□□□□ -1.32
SUDS3-202ENST00000541280 GCLCP48506 637 aaPredicted RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms