RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 ZNF394Q53GI3 561 aa15.74■□□□□ 0.11
SMARCA4-207ENST00000541122 CDKAL1Q5VV42 579 aa15.74■□□□□ 0.11
SMARCA4-207ENST00000541122 USP49Q70CQ1 688 aa15.74■□□□□ 0.11
SMARCA4-207ENST00000541122 ATG9AQ7Z3C6 839 aa15.74■□□□□ 0.11
SMARCA4-207ENST00000541122 NCAPG2Q86XI2 1143 aa15.74■□□□□ 0.11
SMARCA4-207ENST00000541122 JADE3Q92613 823 aa15.74■□□□□ 0.11
SMARCA4-207ENST00000541122 BEGAINQ9BUH8 593 aa15.74■□□□□ 0.11
SMARCA4-207ENST00000541122 ADNPQ9H2P0 1102 aa15.74■□□□□ 0.11
SMARCA4-207ENST00000541122 XPO7Q9UIA9 1087 aaKnown RBP15.74■□□□□ 0.11
SMARCA4-207ENST00000541122 SEC24DO94855 1032 aaPredicted RBP15.73■□□□□ 0.11
SMARCA4-207ENST00000541122 PTPN4P29074 926 aa15.73■□□□□ 0.11
SMARCA4-207ENST00000541122 GPC3P51654 580 aa15.73■□□□□ 0.11
SMARCA4-207ENST00000541122 PRAMEP78395 509 aa15.73■□□□□ 0.11
SMARCA4-207ENST00000541122 CAPRIN1Q14444 709 aaKnown RBP15.73■□□□□ 0.11
SMARCA4-207ENST00000541122 FASTKD1Q53R41 847 aaKnown RBP15.73■□□□□ 0.11
SMARCA4-207ENST00000541122 CLEC4GQ6UXB4 293 aa15.73■□□□□ 0.11
SMARCA4-207ENST00000541122 ISCA1Q9BUE6 129 aa15.73■□□□□ 0.11
SMARCA4-207ENST00000541122 RHBDL2Q9NX52 303 aa15.73■□□□□ 0.11
SMARCA4-207ENST00000541122 SLC13A4Q9UKG4 626 aa15.73■□□□□ 0.11
SMARCA4-207ENST00000541122 FAM205CA6NFA0 338 aa15.73■□□□□ 0.11
SMARCA4-207ENST00000541122 M0QYV0 167 aa15.73■□□□□ 0.11
SMARCA4-207ENST00000541122 EIF3DO15371 548 aaKnown RBP eCLIP15.73■□□□□ 0.111e-8■□□□□ 9.3
SMARCA4-207ENST00000541122 NPR1P16066 1061 aa15.73■□□□□ 0.11
SMARCA4-207ENST00000541122 KCNQ4P56696 695 aa15.73■□□□□ 0.11
SMARCA4-207ENST00000541122 NUP107P57740 925 aa15.73■□□□□ 0.11
SMARCA4-207ENST00000541122 SUSD4Q5VX71 490 aa15.73■□□□□ 0.11
SMARCA4-207ENST00000541122 CDR2LQ86X02 465 aaPredicted RBP15.73■□□□□ 0.11
SMARCA4-207ENST00000541122 SLC13A5Q86YT5 568 aaPredicted RBP15.73■□□□□ 0.11
SMARCA4-207ENST00000541122 MAP3K14Q99558 947 aa15.73■□□□□ 0.11
SMARCA4-207ENST00000541122 CNOT7Q9UIV1 285 aaKnown RBP15.73■□□□□ 0.11
SMARCA4-207ENST00000541122 SNRPFP62306 86 aaKnown RBP15.73■□□□□ 0.11
SMARCA4-207ENST00000541122 KCTD2Q14681 263 aa15.73■□□□□ 0.11
SMARCA4-207ENST00000541122 RNF139Q8WU17 664 aa15.73■□□□□ 0.11
SMARCA4-207ENST00000541122 CEP95Q96GE4 821 aa15.73■□□□□ 0.11
SMARCA4-207ENST00000541122 WEE2P0C1S8 567 aa15.73■□□□□ 0.11
SMARCA4-207ENST00000541122 HERVK_113P62684 666 aa15.73■□□□□ 0.11
SMARCA4-207ENST00000541122 GRAPQ13588 217 aa15.73■□□□□ 0.11
SMARCA4-207ENST00000541122 CATSPER3Q86XQ3 398 aa15.73■□□□□ 0.11
SMARCA4-207ENST00000541122 ZNF677Q86XU0 584 aa15.73■□□□□ 0.11
SMARCA4-207ENST00000541122 FLAD1Q8NFF5 587 aa15.73■□□□□ 0.11
SMARCA4-207ENST00000541122 GRAPLQ8TC17 118 aaPredicted RBP15.73■□□□□ 0.11
SMARCA4-207ENST00000541122 ATXN2LQ8WWM7 1075 aaKnown RBP15.73■□□□□ 0.11
SMARCA4-207ENST00000541122 PAK5Q9P286 719 aa15.73■□□□□ 0.11
SMARCA4-207ENST00000541122 LRCH1Q9Y2L9 728 aa15.73■□□□□ 0.11
SMARCA4-207ENST00000541122 INO80Q9ULG1 1556 aaPredicted RBP15.72■□□□□ 0.11
SMARCA4-207ENST00000541122 CES2O00748 559 aa15.72■□□□□ 0.11
SMARCA4-207ENST00000541122 MAPK6Q16659 721 aa15.72■□□□□ 0.11
SMARCA4-207ENST00000541122 AASDHQ4L235 1098 aaPredicted RBP15.72■□□□□ 0.11
SMARCA4-207ENST00000541122 ZSWIM1Q9BR11 485 aa15.72■□□□□ 0.11
SMARCA4-207ENST00000541122 ADGRA3Q8IWK6 1321 aa15.72■□□□□ 0.11
SMARCA4-207ENST00000541122 A0A0A6YYK5 440 aaPredicted RBP15.72■□□□□ 0.11
SMARCA4-207ENST00000541122 USP17L10C9JJH3 530 aa15.72■□□□□ 0.11
SMARCA4-207ENST00000541122 UBOX5O94941 541 aa15.72■□□□□ 0.11
SMARCA4-207ENST00000541122 TRIM16LQ309B1 348 aa15.72■□□□□ 0.11
SMARCA4-207ENST00000541122 HAUS6Q7Z4H7 955 aa15.72■□□□□ 0.11
SMARCA4-207ENST00000541122 OR6B3Q8NGW1 331 aa15.72■□□□□ 0.11
SMARCA4-207ENST00000541122 CNKSR1Q969H4 720 aa15.72■□□□□ 0.11
SMARCA4-207ENST00000541122 FRMD8P1Q9BZ68 369 aaPredicted RBP15.72■□□□□ 0.11
SMARCA4-207ENST00000541122 NSMCE4AQ9NXX6 385 aa15.72■□□□□ 0.11
SMARCA4-207ENST00000541122 HAO1Q9UJM8 370 aa15.72■□□□□ 0.11
SMARCA4-207ENST00000541122 CDYLQ9Y232 598 aa15.72■□□□□ 0.11
SMARCA4-207ENST00000541122 M0R3G1 203 aa15.72■□□□□ 0.11
SMARCA4-207ENST00000541122 SASH3O75995 380 aa15.72■□□□□ 0.11
SMARCA4-207ENST00000541122 EIF2AK2P19525 551 aaKnown RBP15.72■□□□□ 0.11
SMARCA4-207ENST00000541122 PSMC5P62195 406 aa15.72■□□□□ 0.11
SMARCA4-207ENST00000541122 TRIM28Q13263 835 aaKnown RBP15.72■□□□□ 0.11
SMARCA4-207ENST00000541122 SPDYCQ5MJ68 293 aa15.72■□□□□ 0.11
SMARCA4-207ENST00000541122 PPIL6Q8IXY8 311 aa15.72■□□□□ 0.11
SMARCA4-207ENST00000541122 FAM193BQ96PV7 902 aaPredicted RBP15.72■□□□□ 0.11
SMARCA4-207ENST00000541122 PRPF18Q99633 342 aaKnown RBP15.72■□□□□ 0.11
SMARCA4-207ENST00000541122 LXNQ9BS40 222 aa15.72■□□□□ 0.11
SMARCA4-207ENST00000541122 FAM192AQ9GZU8 254 aa15.72■□□□□ 0.11
SMARCA4-207ENST00000541122 C2orf40Q9H1Z8 148 aa15.72■□□□□ 0.11
SMARCA4-207ENST00000541122 CAPN6Q9Y6Q1 641 aa15.72■□□□□ 0.11
SMARCA4-207ENST00000541122 KLK7P49862 253 aa15.72■□□□□ 0.11
SMARCA4-207ENST00000541122 OSTNP61366 133 aa15.72■□□□□ 0.11
SMARCA4-207ENST00000541122 MRPL28Q13084 256 aaKnown RBP15.72■□□□□ 0.11
SMARCA4-207ENST00000541122 C3orf62Q6ZUJ4 267 aa15.72■□□□□ 0.11
SMARCA4-207ENST00000541122 KRT35Q92764 455 aa15.72■□□□□ 0.11
SMARCA4-207ENST00000541122 COA1Q9GZY4 146 aa15.72■□□□□ 0.11
SMARCA4-207ENST00000541122 VPS33BQ9H267 617 aa15.72■□□□□ 0.11
SMARCA4-207ENST00000541122 COG4Q9H9E3 785 aa15.72■□□□□ 0.11
SMARCA4-207ENST00000541122 DMGDHQ9UI17 866 aaKnown RBP15.72■□□□□ 0.11
SMARCA4-207ENST00000541122 PSMD3O43242 534 aa15.71■□□□□ 0.11
SMARCA4-207ENST00000541122 GRIN1Q05586 938 aa15.71■□□□□ 0.11
SMARCA4-207ENST00000541122 IMPG1Q17R60 797 aa15.71■□□□□ 0.11
SMARCA4-207ENST00000541122 TRMT5Q32P41 509 aaKnown RBP15.71■□□□□ 0.11
SMARCA4-207ENST00000541122 SCUBE1Q8IWY4 988 aa15.71■□□□□ 0.11
SMARCA4-207ENST00000541122 AENQ8WTP8 325 aaKnown RBP15.71■□□□□ 0.11
SMARCA4-207ENST00000541122 TMA16Q96EY4 203 aaKnown RBP15.71■□□□□ 0.11
SMARCA4-207ENST00000541122 INPP5FQ9Y2H2 1132 aa15.71■□□□□ 0.11
SMARCA4-207ENST00000541122 STAT3P40763 770 aa15.71■□□□□ 0.11
SMARCA4-207ENST00000541122 FXR2P51116 673 aaKnown RBP eCLIP15.71■□□□□ 0.115e-7■■■□□ 19.1
SMARCA4-207ENST00000541122 EFHC2Q5JST6 749 aa15.71■□□□□ 0.11
SMARCA4-207ENST00000541122 FAM102AQ5T9C2 384 aaPredicted RBP15.71■□□□□ 0.11
SMARCA4-207ENST00000541122 GPR141Q7Z602 305 aa15.71■□□□□ 0.11
SMARCA4-207ENST00000541122 EIF1ADQ8N9N8 165 aaKnown RBP15.71■□□□□ 0.11
SMARCA4-207ENST00000541122 PLA2G12BQ9BX93 195 aa15.71■□□□□ 0.11
SMARCA4-207ENST00000541122 HEY2Q9UBP5 337 aa15.71■□□□□ 0.11
SMARCA4-207ENST00000541122 OVOS2A0A0G2JMS6 1433 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms