RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 TRMT10CQ7L0Y3 403 aaKnown RBP11.03□□□□□ -0.64
CDC42SE1-207ENST00000540998 CYFIP1Q7L576 1253 aa11.03□□□□□ -0.64
CDC42SE1-207ENST00000540998 TMEM109Q9BVC6 243 aa11.03□□□□□ -0.64
CDC42SE1-207ENST00000540998 KIAA1683Q9H0B3 1180 aa11.03□□□□□ -0.64
CDC42SE1-207ENST00000540998 PRKAG3Q9UGI9 489 aa11.03□□□□□ -0.64
CDC42SE1-207ENST00000540998 GTF3C4Q9UKN8 822 aa11.03□□□□□ -0.64
CDC42SE1-207ENST00000540998 ATP8B3O60423 1300 aa11.02□□□□□ -0.64
CDC42SE1-207ENST00000540998 CFAP73A6NFT4 308 aa11.02□□□□□ -0.64
CDC42SE1-207ENST00000540998 ENTPD5O75356 428 aa11.02□□□□□ -0.64
CDC42SE1-207ENST00000540998 FDX1P10109 184 aa11.02□□□□□ -0.64
CDC42SE1-207ENST00000540998 GCAP28676 217 aa11.02□□□□□ -0.64
CDC42SE1-207ENST00000540998 RPA3P35244 121 aaPredicted RBP11.02□□□□□ -0.64
CDC42SE1-207ENST00000540998 TUBP50607 506 aa11.02□□□□□ -0.64
CDC42SE1-207ENST00000540998 HADHBP55084 474 aaKnown RBP11.02□□□□□ -0.64
CDC42SE1-207ENST00000540998 CDR2Q01850 454 aa11.02□□□□□ -0.64
CDC42SE1-207ENST00000540998 TXNRD3NBQ6F5E7 133 aa11.02□□□□□ -0.64
CDC42SE1-207ENST00000540998 STXBP4Q6ZWJ1 553 aa11.02□□□□□ -0.64
CDC42SE1-207ENST00000540998 ASRGL1Q7L266 308 aa11.02□□□□□ -0.64
CDC42SE1-207ENST00000540998 VSIG1Q86XK7 387 aa11.02□□□□□ -0.64
CDC42SE1-207ENST00000540998 SUPT20HQ8NEM7 779 aa11.02□□□□□ -0.64
CDC42SE1-207ENST00000540998 PRR11Q96HE9 360 aaPredicted RBP11.02□□□□□ -0.64
CDC42SE1-207ENST00000540998 SERPINB12Q96P63 405 aa11.02□□□□□ -0.64
CDC42SE1-207ENST00000540998 ACCSQ96QU6 501 aa11.02□□□□□ -0.64
CDC42SE1-207ENST00000540998 RBM15Q96T37 977 aaKnown RBP eCLIP11.02□□□□□ -0.645e-10■■■□□ 14.7
CDC42SE1-207ENST00000540998 TRIM6Q9C030 488 aaPredicted RBP11.02□□□□□ -0.64
CDC42SE1-207ENST00000540998 RXFP1Q9HBX9 757 aa11.02□□□□□ -0.64
CDC42SE1-207ENST00000540998 SLC5A4Q9NY91 659 aa11.02□□□□□ -0.64
CDC42SE1-207ENST00000540998 KLHL14Q9P2G3 628 aa11.02□□□□□ -0.64
CDC42SE1-207ENST00000540998 LARSQ9P2J5 1176 aaKnown RBP11.02□□□□□ -0.64
CDC42SE1-207ENST00000540998 HSPA6P17066 643 aa11.02□□□□□ -0.65
CDC42SE1-207ENST00000540998 ATF7P17544 494 aaPredicted RBP11.02□□□□□ -0.65
CDC42SE1-207ENST00000540998 SLC1A5Q15758 541 aa11.02□□□□□ -0.65
CDC42SE1-207ENST00000540998 SLC39A4Q6P5W5 647 aa11.02□□□□□ -0.65
CDC42SE1-207ENST00000540998 SV2AQ7L0J3 742 aa11.02□□□□□ -0.65
CDC42SE1-207ENST00000540998 LDHDQ86WU2 507 aa11.02□□□□□ -0.65
CDC42SE1-207ENST00000540998 GMCL1P1Q8NEA9 526 aa11.02□□□□□ -0.65
CDC42SE1-207ENST00000540998 DDX27Q96GQ7 796 aaKnown RBP11.02□□□□□ -0.65
CDC42SE1-207ENST00000540998 RUNDC3BQ96NL0 473 aa11.02□□□□□ -0.65
CDC42SE1-207ENST00000540998 YIPF3Q9GZM5 350 aa11.02□□□□□ -0.65
CDC42SE1-207ENST00000540998 STMN4Q9H169 189 aaPredicted RBP11.02□□□□□ -0.65
CDC42SE1-207ENST00000540998 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.02□□□□□ -0.65
CDC42SE1-207ENST00000540998 NKIRAS1Q9NYS0 192 aa11.02□□□□□ -0.65
CDC42SE1-207ENST00000540998 SEL1LQ9UBV2 794 aa11.02□□□□□ -0.65
CDC42SE1-207ENST00000540998 DCTN4Q9UJW0 460 aa11.02□□□□□ -0.65
CDC42SE1-207ENST00000540998 MYCLP12524 364 aaPredicted RBP11.02□□□□□ -0.65
CDC42SE1-207ENST00000540998 DSG3P32926 999 aa11.02□□□□□ -0.65
CDC42SE1-207ENST00000540998 GCKP35557 465 aa11.02□□□□□ -0.65
CDC42SE1-207ENST00000540998 CRYMQ14894 314 aa11.02□□□□□ -0.65
CDC42SE1-207ENST00000540998 NFIL3Q16649 462 aa11.02□□□□□ -0.65
CDC42SE1-207ENST00000540998 AOC3Q16853 763 aa11.02□□□□□ -0.65
CDC42SE1-207ENST00000540998 PCNX4Q63HM2 1172 aa11.02□□□□□ -0.65
CDC42SE1-207ENST00000540998 RFX8Q6ZV50 586 aa11.02□□□□□ -0.65
CDC42SE1-207ENST00000540998 TEX2Q8IWB9 1127 aa11.02□□□□□ -0.65
CDC42SE1-207ENST00000540998 PARD3BQ8TEW8 1205 aa11.02□□□□□ -0.65
CDC42SE1-207ENST00000540998 FAM213AQ9BRX8 229 aa11.02□□□□□ -0.65
CDC42SE1-207ENST00000540998 WHRNQ9P202 907 aa11.02□□□□□ -0.65
CDC42SE1-207ENST00000540998 SUGT1Q9Y2Z0 365 aa11.02□□□□□ -0.65
CDC42SE1-207ENST00000540998 ADGRA3Q8IWK6 1321 aa11.01□□□□□ -0.65
CDC42SE1-207ENST00000540998 EXOC1LA0A1B0GW35 172 aa11.01□□□□□ -0.65
CDC42SE1-207ENST00000540998 VIL1P09327 827 aaKnown RBP11.01□□□□□ -0.65
CDC42SE1-207ENST00000540998 ALADP13716 330 aa11.01□□□□□ -0.65
CDC42SE1-207ENST00000540998 CNGA1P29973 690 aa11.01□□□□□ -0.65
CDC42SE1-207ENST00000540998 ACAD10Q6JQN1 1059 aa11.01□□□□□ -0.65
CDC42SE1-207ENST00000540998 RFWD3Q6PCD5 774 aa11.01□□□□□ -0.65
CDC42SE1-207ENST00000540998 ZNF365Q70YC5 407 aa11.01□□□□□ -0.65
CDC42SE1-207ENST00000540998 SLC9A9Q8IVB4 645 aa11.01□□□□□ -0.65
CDC42SE1-207ENST00000540998 DNPEPQ9ULA0 475 aa11.01□□□□□ -0.65
CDC42SE1-207ENST00000540998 PHTF1Q9UMS5 762 aa11.01□□□□□ -0.65
CDC42SE1-207ENST00000540998 UMODL1Q5DID0 1318 aa11.01□□□□□ -0.65
CDC42SE1-207ENST00000540998 DENND3A2RUS2 1198 aa11.01□□□□□ -0.65
CDC42SE1-207ENST00000540998 PIK3CDO00329 1044 aa11.01□□□□□ -0.65
CDC42SE1-207ENST00000540998 ECE2O60344 883 aa11.01□□□□□ -0.65
CDC42SE1-207ENST00000540998 IFNB1P01574 187 aa11.01□□□□□ -0.65
CDC42SE1-207ENST00000540998 PLS3P13797 630 aa11.01□□□□□ -0.65
CDC42SE1-207ENST00000540998 ATP2A2P16615 1042 aaKnown RBP11.01□□□□□ -0.65
CDC42SE1-207ENST00000540998 KRT15P19012 456 aa11.01□□□□□ -0.65
CDC42SE1-207ENST00000540998 YWHABP31946 246 aaKnown RBP11.01□□□□□ -0.65
CDC42SE1-207ENST00000540998 MFAP3P55082 362 aa11.01□□□□□ -0.65
CDC42SE1-207ENST00000540998 RPL7AP62424 266 aaKnown RBP11.01□□□□□ -0.65
CDC42SE1-207ENST00000540998 RIPK1Q13546 671 aa11.01□□□□□ -0.65
CDC42SE1-207ENST00000540998 PTK6Q13882 451 aa11.01□□□□□ -0.65
CDC42SE1-207ENST00000540998 MTFR1Q15390 333 aa11.01□□□□□ -0.65
CDC42SE1-207ENST00000540998 TAF11Q15544 211 aa11.01□□□□□ -0.65
CDC42SE1-207ENST00000540998 CLEC16AQ2KHT3 1053 aa11.01□□□□□ -0.65
CDC42SE1-207ENST00000540998 XKR9Q5GH70 373 aa11.01□□□□□ -0.65
CDC42SE1-207ENST00000540998 ROPN1BQ9BZX4 212 aaPredicted RBP11.01□□□□□ -0.65
CDC42SE1-207ENST00000540998 VPS37BQ9H9H4 285 aa11.01□□□□□ -0.65
CDC42SE1-207ENST00000540998 ROPN1Q9HAT0 212 aaPredicted RBP11.01□□□□□ -0.65
CDC42SE1-207ENST00000540998 METTL5Q9NRN9 209 aaKnown RBP11.01□□□□□ -0.65
CDC42SE1-207ENST00000540998 RAB20Q9NX57 234 aa11.01□□□□□ -0.65
CDC42SE1-207ENST00000540998 USP21Q9UK80 565 aa11.01□□□□□ -0.65
CDC42SE1-207ENST00000540998 PTPRJQ12913 1337 aa11.01□□□□□ -0.65
CDC42SE1-207ENST00000540998 DHX15O43143 795 aaKnown RBP11□□□□□ -0.65
CDC42SE1-207ENST00000540998 UNC5CO95185 931 aa11□□□□□ -0.65
CDC42SE1-207ENST00000540998 GZMAP12544 262 aa11□□□□□ -0.65
CDC42SE1-207ENST00000540998 ITIH2P19823 946 aa11□□□□□ -0.65
CDC42SE1-207ENST00000540998 MAGEA4P43358 317 aa11□□□□□ -0.65
CDC42SE1-207ENST00000540998 DYNLT1P63172 113 aa11□□□□□ -0.65
CDC42SE1-207ENST00000540998 NBPF20Q3BBV1 942 aa11□□□□□ -0.65
CDC42SE1-207ENST00000540998 DACT2Q5SW24 774 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms