RNA–Protein interactions for RNA: ENST00000540876.1

CLDN2-202, Transcript of claudin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN2, Length 2,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2-202ENST00000540876 ARMCX3Q9UH62 379 aaPredicted RBP10.31□□□□□ -0.76
CLDN2-202ENST00000540876 FRMD4BQ9Y2L6 1034 aa10.31□□□□□ -0.76
CLDN2-202ENST00000540876 RBMX2Q9Y388 322 aaKnown RBP10.31□□□□□ -0.76
CLDN2-202ENST00000540876 GPC6Q9Y625 555 aaPredicted RBP10.31□□□□□ -0.76
CLDN2-202ENST00000540876 WDR19Q8NEZ3 1342 aa10.31□□□□□ -0.76
CLDN2-202ENST00000540876 BICDL2A1A5D9 508 aa10.3□□□□□ -0.76
CLDN2-202ENST00000540876 RBAK-RBAKDNI3L0D1 243 aa10.3□□□□□ -0.76
CLDN2-202ENST00000540876 SERPING1P05155 500 aa10.3□□□□□ -0.76
CLDN2-202ENST00000540876 UQCRFS1P1P0C7P4 283 aa10.3□□□□□ -0.76
CLDN2-202ENST00000540876 SCG2P13521 617 aa10.3□□□□□ -0.76
CLDN2-202ENST00000540876 KRT13P13646 458 aa10.3□□□□□ -0.76
CLDN2-202ENST00000540876 CCNE1P24864 410 aa10.3□□□□□ -0.76
CLDN2-202ENST00000540876 TUFMP49411 452 aaKnown RBP10.3□□□□□ -0.76
CLDN2-202ENST00000540876 IL9RQ01113 521 aa10.3□□□□□ -0.76
CLDN2-202ENST00000540876 KRT72Q14CN4 511 aa10.3□□□□□ -0.76
CLDN2-202ENST00000540876 C16orf72Q14CZ0 275 aa10.3□□□□□ -0.76
CLDN2-202ENST00000540876 CAVIN4Q5BKX8 364 aa10.3□□□□□ -0.76
CLDN2-202ENST00000540876 KIAA1755Q5JYT7 1200 aa10.3□□□□□ -0.76
CLDN2-202ENST00000540876 METTL21CQ5VZV1 264 aa10.3□□□□□ -0.76
CLDN2-202ENST00000540876 MFSD5Q6N075 450 aa10.3□□□□□ -0.76
CLDN2-202ENST00000540876 NEPROQ6NW34 567 aa10.3□□□□□ -0.76
CLDN2-202ENST00000540876 MFSD6Q6ZSS7 791 aa10.3□□□□□ -0.76
CLDN2-202ENST00000540876 UNC13DQ70J99 1090 aa10.3□□□□□ -0.76
CLDN2-202ENST00000540876 SRRM1Q8IYB3 904 aaKnown RBP10.3□□□□□ -0.76
CLDN2-202ENST00000540876 ERLEC1Q96DZ1 483 aa10.3□□□□□ -0.76
CLDN2-202ENST00000540876 TMEM109Q9BVC6 243 aa10.3□□□□□ -0.76
CLDN2-202ENST00000540876 UBN1Q9NPG3 1134 aa10.3□□□□□ -0.76
CLDN2-202ENST00000540876 ZSWIM5Q9P217 1185 aa10.3□□□□□ -0.76
CLDN2-202ENST00000540876 IVNS1ABPQ9Y6Y0 642 aa10.3□□□□□ -0.76
CLDN2-202ENST00000540876 MYH4Q9Y623 1939 aa10.3□□□□□ -0.76
CLDN2-202ENST00000540876 PFASO15067 1338 aa10.3□□□□□ -0.76
CLDN2-202ENST00000540876 hCG_1642624A0A1W2PR95 340 aa10.3□□□□□ -0.76
CLDN2-202ENST00000540876 TTLL13PA6NNM8 815 aa10.3□□□□□ -0.76
CLDN2-202ENST00000540876 DEXIO95424 95 aa10.3□□□□□ -0.76
CLDN2-202ENST00000540876 GAS8O95995 478 aa10.3□□□□□ -0.76
CLDN2-202ENST00000540876 ATP6V1B1P15313 513 aa10.3□□□□□ -0.76
CLDN2-202ENST00000540876 EIF2B2P49770 351 aaKnown RBP10.3□□□□□ -0.76
CLDN2-202ENST00000540876 RAPGEF1Q13905 1077 aa10.3□□□□□ -0.76
CLDN2-202ENST00000540876 UBE3CQ15386 1083 aa10.3□□□□□ -0.76
CLDN2-202ENST00000540876 GRIK5Q16478 980 aa10.3□□□□□ -0.76
CLDN2-202ENST00000540876 SLC18A3Q16572 532 aa10.3□□□□□ -0.76
CLDN2-202ENST00000540876 RTN1Q16799 776 aa10.3□□□□□ -0.76
CLDN2-202ENST00000540876 HSP90AA5PQ58FG0 334 aa10.3□□□□□ -0.76
CLDN2-202ENST00000540876 TTC38Q5R3I4 469 aa10.3□□□□□ -0.76
CLDN2-202ENST00000540876 SIX5Q8N196 739 aa10.3□□□□□ -0.76
CLDN2-202ENST00000540876 MORC4Q8TE76 937 aa10.3□□□□□ -0.76
CLDN2-202ENST00000540876 SDR42E1Q8WUS8 393 aa10.3□□□□□ -0.76
CLDN2-202ENST00000540876 CEP295NLQ96MC4 621 aa10.3□□□□□ -0.76
CLDN2-202ENST00000540876 PRICKLE1Q96MT3 831 aaPredicted RBP10.3□□□□□ -0.76
CLDN2-202ENST00000540876 FAM161BQ96MY7 647 aa10.3□□□□□ -0.76
CLDN2-202ENST00000540876 STRBPQ96SI9 672 aaKnown RBP10.3□□□□□ -0.76
CLDN2-202ENST00000540876 ZC3H12CQ9C0D7 883 aaKnown RBP10.3□□□□□ -0.76
CLDN2-202ENST00000540876 GRIP2Q9C0E4 1043 aa10.3□□□□□ -0.76
CLDN2-202ENST00000540876 LY9Q9HBG7 655 aa10.3□□□□□ -0.76
CLDN2-202ENST00000540876 STARD13Q9Y3M8 1113 aa10.3□□□□□ -0.76
CLDN2-202ENST00000540876 HEMK1Q9Y5R4 338 aaPredicted RBP10.3□□□□□ -0.76
CLDN2-202ENST00000540876 SH3PXD2BA1X283 911 aa10.3□□□□□ -0.76
CLDN2-202ENST00000540876 RASA4BC9J798 803 aa10.3□□□□□ -0.76
CLDN2-202ENST00000540876 RASA4O43374 803 aa10.3□□□□□ -0.76
CLDN2-202ENST00000540876 STRNO43815 780 aa10.3□□□□□ -0.76
CLDN2-202ENST00000540876 TLR2O60603 784 aa10.3□□□□□ -0.76
CLDN2-202ENST00000540876 CLPTM1O96005 669 aa10.3□□□□□ -0.76
CLDN2-202ENST00000540876 NAT2P11245 290 aa10.3□□□□□ -0.76
CLDN2-202ENST00000540876 CRABP2P29373 138 aa10.3□□□□□ -0.76
CLDN2-202ENST00000540876 ATP5DP30049 168 aa10.3□□□□□ -0.76
CLDN2-202ENST00000540876 RHBDL3P58872 404 aa10.3□□□□□ -0.76
CLDN2-202ENST00000540876 POU5F1Q01860 360 aaKnown RBP10.3□□□□□ -0.76
CLDN2-202ENST00000540876 NADK2Q4G0N4 442 aa10.3□□□□□ -0.76
CLDN2-202ENST00000540876 NLRP9Q7RTR0 991 aa10.3□□□□□ -0.76
CLDN2-202ENST00000540876 JAMLQ86YT9 394 aa10.3□□□□□ -0.76
CLDN2-202ENST00000540876 LCORLQ8N3X6 602 aa10.3□□□□□ -0.76
CLDN2-202ENST00000540876 GIMAP8Q8ND71 665 aaPredicted RBP10.3□□□□□ -0.76
CLDN2-202ENST00000540876 ZFP28Q8NHY6 868 aa10.3□□□□□ -0.76
CLDN2-202ENST00000540876 SH3GL1Q99961 368 aa10.3□□□□□ -0.76
CLDN2-202ENST00000540876 LRRC27Q9C0I9 530 aa10.3□□□□□ -0.76
CLDN2-202ENST00000540876 GBA3Q9H227 469 aa10.3□□□□□ -0.76
CLDN2-202ENST00000540876 EPB41L1Q9H4G0 881 aa10.3□□□□□ -0.76
CLDN2-202ENST00000540876 ARMC7Q9H6L4 198 aa10.3□□□□□ -0.76
CLDN2-202ENST00000540876 EPB41L4AQ9HCS5 686 aaPredicted RBP10.3□□□□□ -0.76
CLDN2-202ENST00000540876 CEP72Q9P209 647 aa10.3□□□□□ -0.76
CLDN2-202ENST00000540876 ARPP21Q9UBL0 812 aaPredicted RBP10.3□□□□□ -0.76
CLDN2-202ENST00000540876 FBXO9Q9UK97 447 aaPredicted RBP10.3□□□□□ -0.76
CLDN2-202ENST00000540876 CARD8Q9Y2G2 431 aa10.3□□□□□ -0.76
CLDN2-202ENST00000540876 NDC80O14777 642 aa10.29□□□□□ -0.76
CLDN2-202ENST00000540876 KIAA0391O15091 583 aaKnown RBP10.29□□□□□ -0.76
CLDN2-202ENST00000540876 TRMUO75648 421 aaKnown RBP10.29□□□□□ -0.76
CLDN2-202ENST00000540876 MCM7P33993 719 aa10.29□□□□□ -0.76
CLDN2-202ENST00000540876 TCF7P36402 384 aaPredicted RBP10.29□□□□□ -0.76
CLDN2-202ENST00000540876 RPL5P46777 297 aaKnown RBP10.29□□□□□ -0.76
CLDN2-202ENST00000540876 KLHL30Q0D2K2 578 aa10.29□□□□□ -0.76
CLDN2-202ENST00000540876 RAPH1Q70E73 1250 aa10.29□□□□□ -0.76
CLDN2-202ENST00000540876 IGDCC4Q8TDY8 1250 aa10.29□□□□□ -0.76
CLDN2-202ENST00000540876 BHMTQ93088 406 aa10.29□□□□□ -0.76
CLDN2-202ENST00000540876 PYM1Q9BRP8 204 aaKnown RBP10.29□□□□□ -0.76
CLDN2-202ENST00000540876 NUP85Q9BW27 656 aa10.29□□□□□ -0.76
CLDN2-202ENST00000540876 ARL8BQ9NVJ2 186 aa10.29□□□□□ -0.76
CLDN2-202ENST00000540876 DKK3Q9UBP4 350 aa10.29□□□□□ -0.76
CLDN2-202ENST00000540876 COQ6Q9Y2Z9 468 aa10.29□□□□□ -0.76
CLDN2-202ENST00000540876 TELO2Q9Y4R8 837 aa10.29□□□□□ -0.76
CLDN2-202ENST00000540876 NOX1Q9Y5S8 564 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms