RNA–Protein interactions for RNA: ENST00000540819.1

PRKDC-209, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-209ENST00000540819 ZNF112Q9UJU3 913 aa6.11□□□□□ -1.43
PRKDC-209ENST00000540819 A0A1W2PPL8 197 aa6.1□□□□□ -1.43
PRKDC-209ENST00000540819 OTOL1A6NHN0 477 aaPredicted RBP6.1□□□□□ -1.43
PRKDC-209ENST00000540819 F8W8V4 182 aa6.1□□□□□ -1.43
PRKDC-209ENST00000540819 MYO1FO00160 1098 aa6.1□□□□□ -1.43
PRKDC-209ENST00000540819 TRIM38O00635 465 aa6.1□□□□□ -1.43
PRKDC-209ENST00000540819 RPLP2P05387 115 aaKnown RBP6.1□□□□□ -1.43
PRKDC-209ENST00000540819 IDEP14735 1019 aa6.1□□□□□ -1.43
PRKDC-209ENST00000540819 IFNGR1P15260 489 aa6.1□□□□□ -1.43
PRKDC-209ENST00000540819 PAMP19021 973 aa6.1□□□□□ -1.43
PRKDC-209ENST00000540819 SCP2P22307 547 aa6.1□□□□□ -1.43
PRKDC-209ENST00000540819 FNTBP49356 437 aa6.1□□□□□ -1.43
PRKDC-209ENST00000540819 PAPOLAP51003 745 aaKnown RBP6.1□□□□□ -1.43
PRKDC-209ENST00000540819 ERVFRD-1P60508 538 aa6.1□□□□□ -1.43
PRKDC-209ENST00000540819 CYP4F8P98187 520 aa6.1□□□□□ -1.43
PRKDC-209ENST00000540819 RAB3GAP1Q15042 981 aa6.1□□□□□ -1.43
PRKDC-209ENST00000540819 INF2Q27J81 1249 aa6.1□□□□□ -1.43
PRKDC-209ENST00000540819 VMACQ2NL98 169 aa6.1□□□□□ -1.43
PRKDC-209ENST00000540819 C3orf36Q3SXR2 165 aa6.1□□□□□ -1.43
PRKDC-209ENST00000540819 UBXN11Q5T124 520 aa6.1□□□□□ -1.43
PRKDC-209ENST00000540819 KLHDC7AQ5VTJ3 777 aa6.1□□□□□ -1.43
PRKDC-209ENST00000540819 FSTL4Q6MZW2 842 aa6.1□□□□□ -1.43
PRKDC-209ENST00000540819 KLHDC10Q6PID8 442 aa6.1□□□□□ -1.43
PRKDC-209ENST00000540819 EP400NLQ6ZTU2 488 aa6.1□□□□□ -1.43
PRKDC-209ENST00000540819 RTN4RL1Q86UN2 441 aaPredicted RBP6.1□□□□□ -1.43
PRKDC-209ENST00000540819 SP8Q8IXZ3 490 aa6.1□□□□□ -1.43
PRKDC-209ENST00000540819 FTSJ3Q8IY81 847 aaKnown RBP6.1□□□□□ -1.43
PRKDC-209ENST00000540819 TEX11Q8IYF3 940 aa6.1□□□□□ -1.43
PRKDC-209ENST00000540819 ZDHHC14Q8IZN3 488 aa6.1□□□□□ -1.43
PRKDC-209ENST00000540819 ARL10Q8N8L6 244 aa6.1□□□□□ -1.43
PRKDC-209ENST00000540819 TDRD7Q8NHU6 1098 aaKnown RBP6.1□□□□□ -1.43
PRKDC-209ENST00000540819 ATP2A3Q93084 1043 aa6.1□□□□□ -1.43
PRKDC-209ENST00000540819 HDAC10Q969S8 669 aa6.1□□□□□ -1.43
PRKDC-209ENST00000540819 HEPHQ9BQS7 1158 aa6.1□□□□□ -1.43
PRKDC-209ENST00000540819 ADPGKQ9BRR6 497 aa6.1□□□□□ -1.43
PRKDC-209ENST00000540819 KATNAL1Q9BW62 490 aa6.1□□□□□ -1.43
PRKDC-209ENST00000540819 BRIP1Q9BX63 1249 aa6.1□□□□□ -1.43
PRKDC-209ENST00000540819 EIF2AQ9BY44 585 aaKnown RBP6.1□□□□□ -1.43
PRKDC-209ENST00000540819 ACE2Q9BYF1 805 aaPredicted RBP6.1□□□□□ -1.43
PRKDC-209ENST00000540819 XYLT2Q9H1B5 865 aa6.1□□□□□ -1.43
PRKDC-209ENST00000540819 ATP8A2Q9NTI2 1148 aa6.1□□□□□ -1.43
PRKDC-209ENST00000540819 DENND2AQ9ULE3 1009 aa6.1□□□□□ -1.43
PRKDC-209ENST00000540819 NPHP3-ACAD11A0A0J9YXS1 232 aa6.09□□□□□ -1.43
PRKDC-209ENST00000540819 A0A1W2PQ27 194 aa6.09□□□□□ -1.43
PRKDC-209ENST00000540819 A0A1W2PQ64 194 aa6.09□□□□□ -1.43
PRKDC-209ENST00000540819 A0A1W2PQC6 194 aa6.09□□□□□ -1.43
PRKDC-209ENST00000540819 A0A1W2PQD8 194 aa6.09□□□□□ -1.43
PRKDC-209ENST00000540819 PI4KAP2A4QPH2 592 aa6.09□□□□□ -1.43
PRKDC-209ENST00000540819 TRIM64A6NGJ6 449 aa6.09□□□□□ -1.43
PRKDC-209ENST00000540819 TRIM64BA6NI03 449 aa6.09□□□□□ -1.43
PRKDC-209ENST00000540819 FADS2P1A8MWK0 482 aa6.09□□□□□ -1.43
PRKDC-209ENST00000540819 H7C0S8 307 aa6.09□□□□□ -1.43
PRKDC-209ENST00000540819 MEIS1O00470 390 aa6.09□□□□□ -1.43
PRKDC-209ENST00000540819 ARHGAP6O43182 974 aa6.09□□□□□ -1.43
PRKDC-209ENST00000540819 CLASP2O75122 1294 aaKnown RBP6.09□□□□□ -1.43
PRKDC-209ENST00000540819 MAFO75444 373 aaPredicted RBP6.09□□□□□ -1.43
PRKDC-209ENST00000540819 EFEMP2O95967 443 aa6.09□□□□□ -1.43
PRKDC-209ENST00000540819 APOA4P06727 396 aa6.09□□□□□ -1.43
PRKDC-209ENST00000540819 BRAFP15056 766 aa6.09□□□□□ -1.43
PRKDC-209ENST00000540819 FGFR2P21802 821 aa6.09□□□□□ -1.43
PRKDC-209ENST00000540819 SLC7A1P30825 629 aa6.09□□□□□ -1.43
PRKDC-209ENST00000540819 MC4RP32245 332 aa6.09□□□□□ -1.43
PRKDC-209ENST00000540819 CTSKP43235 329 aa6.09□□□□□ -1.43
PRKDC-209ENST00000540819 FOXO4P98177 505 aa6.09□□□□□ -1.43
PRKDC-209ENST00000540819 CREMQ03060 361 aa6.09□□□□□ -1.43
PRKDC-209ENST00000540819 SPIRE1Q08AE8 756 aa6.09□□□□□ -1.43
PRKDC-209ENST00000540819 SMC1AQ14683 1233 aaKnown RBP6.09□□□□□ -1.43
PRKDC-209ENST00000540819 FIGNQ5HY92 759 aa6.09□□□□□ -1.43
PRKDC-209ENST00000540819 HAUS3Q68CZ6 603 aa6.09□□□□□ -1.43
PRKDC-209ENST00000540819 PLBD1Q6P4A8 553 aa6.09□□□□□ -1.43
PRKDC-209ENST00000540819 CRTC3Q6UUV7 619 aa6.09□□□□□ -1.43
PRKDC-209ENST00000540819 BEND5Q7L4P6 421 aa6.09□□□□□ -1.43
PRKDC-209ENST00000540819 SESTD1Q86VW0 696 aa6.09□□□□□ -1.43
PRKDC-209ENST00000540819 LDHDQ86WU2 507 aa6.09□□□□□ -1.43
PRKDC-209ENST00000540819 VSIG1Q86XK7 387 aa6.09□□□□□ -1.43
PRKDC-209ENST00000540819 TCP11L2Q8N4U5 519 aa6.09□□□□□ -1.43
PRKDC-209ENST00000540819 CCDC191Q8NCU4 936 aa6.09□□□□□ -1.43
PRKDC-209ENST00000540819 FAM71BQ8TC56 605 aa6.09□□□□□ -1.43
PRKDC-209ENST00000540819 TSPEARQ8WU66 669 aa6.09□□□□□ -1.43
PRKDC-209ENST00000540819 NRG4Q8WWG1 115 aa6.09□□□□□ -1.43
PRKDC-209ENST00000540819 CCDC47Q96A33 483 aaKnown RBP6.09□□□□□ -1.43
PRKDC-209ENST00000540819 C18orf8Q96DM3 657 aa6.09□□□□□ -1.43
PRKDC-209ENST00000540819 SUCLG2Q96I99 432 aa6.09□□□□□ -1.43
PRKDC-209ENST00000540819 CHAMP1Q96JM3 812 aa6.09□□□□□ -1.43
PRKDC-209ENST00000540819 CDADC1Q9BWV3 514 aa6.09□□□□□ -1.43
PRKDC-209ENST00000540819 KIAA1683Q9H0B3 1180 aa6.09□□□□□ -1.43
PRKDC-209ENST00000540819 DHX36Q9H2U1 1008 aaKnown RBP6.09□□□□□ -1.43
PRKDC-209ENST00000540819 GHITMQ9H3K2 345 aa6.09□□□□□ -1.43
PRKDC-209ENST00000540819 ARMT1Q9H993 441 aa6.09□□□□□ -1.43
PRKDC-209ENST00000540819 SERHLQ9NQF3 203 aa6.09□□□□□ -1.43
PRKDC-209ENST00000540819 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.09□□□□□ -1.43
PRKDC-209ENST00000540819 DPP7Q9UHL4 492 aa6.09□□□□□ -1.43
PRKDC-209ENST00000540819 FEZ2Q9UHY8 353 aaPredicted RBP6.09□□□□□ -1.43
PRKDC-209ENST00000540819 TIMM13Q9Y5L4 95 aaPredicted RBP6.09□□□□□ -1.43
PRKDC-209ENST00000540819 A0A1W2PQ45 241 aaPredicted RBP6.08□□□□□ -1.44
PRKDC-209ENST00000540819 A0A1W2PQY0 241 aa6.08□□□□□ -1.44
PRKDC-209ENST00000540819 TCRBV5S4A2TA0A5A2 114 aa6.08□□□□□ -1.44
PRKDC-209ENST00000540819 TTC36A6NLP5 189 aa6.08□□□□□ -1.44
PRKDC-209ENST00000540819 MAN2B1O00754 1011 aa6.08□□□□□ -1.44
PRKDC-209ENST00000540819 SCDO00767 359 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms