RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 NRLP54845 237 aa13.69□□□□□ -0.22
COPS7A-211ENST00000540408 OSTNP61366 133 aa13.69□□□□□ -0.22
COPS7A-211ENST00000540408 ARHGAP8P85298 464 aa13.69□□□□□ -0.22
COPS7A-211ENST00000540408 GUCY1B3Q02153 619 aa13.69□□□□□ -0.22
COPS7A-211ENST00000540408 ZNF568Q3ZCX4 644 aa13.69□□□□□ -0.22
COPS7A-211ENST00000540408 TPGS2Q68CL5 300 aa13.69□□□□□ -0.22
COPS7A-211ENST00000540408 TANGO2Q6ICL3 276 aa13.69□□□□□ -0.22
COPS7A-211ENST00000540408 PDZD4Q76G19 769 aaPredicted RBP13.69□□□□□ -0.22
COPS7A-211ENST00000540408 ZBTB44Q8NCP5 570 aa13.69□□□□□ -0.22
COPS7A-211ENST00000540408 IRF7Q92985 503 aa13.69□□□□□ -0.22
COPS7A-211ENST00000540408 C8orf76Q96K31 380 aa13.69□□□□□ -0.22
COPS7A-211ENST00000540408 ZNF512Q96ME7 567 aaPredicted RBP13.69□□□□□ -0.22
COPS7A-211ENST00000540408 ACAP3Q96P50 834 aa13.69□□□□□ -0.22
COPS7A-211ENST00000540408 KIFC3Q9BVG8 833 aa13.69□□□□□ -0.22
COPS7A-211ENST00000540408 TRMT61BQ9BVS5 477 aaKnown RBP13.69□□□□□ -0.22
COPS7A-211ENST00000540408 MRPL4Q9BYD3 311 aaKnown RBP13.69□□□□□ -0.22
COPS7A-211ENST00000540408 RAB34Q9BZG1 259 aa13.69□□□□□ -0.22
COPS7A-211ENST00000540408 PLA2G2FQ9BZM2 168 aa13.69□□□□□ -0.22
COPS7A-211ENST00000540408 FOXP1Q9H334 677 aaPredicted RBP13.69□□□□□ -0.22
COPS7A-211ENST00000540408 GOLGA2P5Q9HBQ8 144 aa13.69□□□□□ -0.22
COPS7A-211ENST00000540408 LRWD1Q9UFC0 647 aa13.69□□□□□ -0.22
COPS7A-211ENST00000540408 KIAA1024Q9UPX6 916 aa13.69□□□□□ -0.22
COPS7A-211ENST00000540408 RBM19Q9Y4C8 960 aaKnown RBP13.69□□□□□ -0.22
COPS7A-211ENST00000540408 DOCK6Q96HP0 2047 aa13.68□□□□□ -0.22
COPS7A-211ENST00000540408 WDR27A2RRH5 827 aa13.68□□□□□ -0.22
COPS7A-211ENST00000540408 PODXLO00592 558 aa13.68□□□□□ -0.22
COPS7A-211ENST00000540408 EDN1P05305 212 aa13.68□□□□□ -0.22
COPS7A-211ENST00000540408 CEBPBP17676 345 aa13.68□□□□□ -0.22
COPS7A-211ENST00000540408 IGFBP6P24592 240 aaPredicted RBP13.68□□□□□ -0.22
COPS7A-211ENST00000540408 DMP1Q13316 513 aaPredicted RBP13.68□□□□□ -0.22
COPS7A-211ENST00000540408 SLC5A9Q2M3M2 681 aa13.68□□□□□ -0.22
COPS7A-211ENST00000540408 TTC38Q5R3I4 469 aa13.68□□□□□ -0.22
COPS7A-211ENST00000540408 TCEAL8Q8IYN2 117 aa13.68□□□□□ -0.22
COPS7A-211ENST00000540408 ACO2Q99798 780 aaKnown RBP13.68□□□□□ -0.22
COPS7A-211ENST00000540408 TMEM134Q9H6X4 195 aa13.68□□□□□ -0.22
COPS7A-211ENST00000540408 POLD4Q9HCU8 107 aa13.68□□□□□ -0.22
COPS7A-211ENST00000540408 KCNG1Q9UIX4 513 aa13.68□□□□□ -0.22
COPS7A-211ENST00000540408 GMEB2Q9UKD1 530 aa13.68□□□□□ -0.22
COPS7A-211ENST00000540408 RAB23Q9ULC3 237 aa13.68□□□□□ -0.22
COPS7A-211ENST00000540408 MAFFQ9ULX9 164 aa13.68□□□□□ -0.22
COPS7A-211ENST00000540408 NOL7Q9UMY1 257 aaKnown RBP13.68□□□□□ -0.22
COPS7A-211ENST00000540408 SMG5Q9UPR3 1016 aaKnown RBP13.68□□□□□ -0.22
COPS7A-211ENST00000540408 CACNA1IQ9P0X4 2223 aa13.68□□□□□ -0.22
COPS7A-211ENST00000540408 DCHS1Q96JQ0 3298 aa13.68□□□□□ -0.22
COPS7A-211ENST00000540408 MARCKSP29966 332 aaPredicted RBP13.67□□□□□ -0.22
COPS7A-211ENST00000540408 NPTX2P47972 431 aa13.67□□□□□ -0.22
COPS7A-211ENST00000540408 FXR2P51116 673 aaKnown RBP eCLIP13.67□□□□□ -0.22
COPS7A-211ENST00000540408 PEX3P56589 373 aa13.67□□□□□ -0.22
COPS7A-211ENST00000540408 LMNB2Q03252 620 aa13.67□□□□□ -0.22
COPS7A-211ENST00000540408 PDIA5Q14554 519 aa13.67□□□□□ -0.22
COPS7A-211ENST00000540408 CTXN3Q4LDR2 81 aa13.67□□□□□ -0.22
COPS7A-211ENST00000540408 XKR4Q5GH76 650 aa13.67□□□□□ -0.22
COPS7A-211ENST00000540408 CD300LGQ6UXG3 332 aa13.67□□□□□ -0.22
COPS7A-211ENST00000540408 ALKAL1Q6UXT8 129 aa13.67□□□□□ -0.22
COPS7A-211ENST00000540408 LEMD2Q8NC56 503 aa13.67□□□□□ -0.22
COPS7A-211ENST00000540408 C3orf58Q8NDZ4 430 aa13.67□□□□□ -0.22
COPS7A-211ENST00000540408 APPL2Q8NEU8 664 aa13.67□□□□□ -0.22
COPS7A-211ENST00000540408 DRC1Q96MC2 740 aa13.67□□□□□ -0.22
COPS7A-211ENST00000540408 IER2Q9BTL4 223 aa13.67□□□□□ -0.22
COPS7A-211ENST00000540408 CDT1Q9H211 546 aa13.67□□□□□ -0.22
COPS7A-211ENST00000540408 EPC1Q9H2F5 836 aa13.67□□□□□ -0.22
COPS7A-211ENST00000540408 KMT5AQ9NQR1 393 aa13.67□□□□□ -0.22
COPS7A-211ENST00000540408 DDX19AQ9NUU7 478 aaKnown RBP13.67□□□□□ -0.22
COPS7A-211ENST00000540408 USP18Q9UMW8 372 aa13.67□□□□□ -0.22
COPS7A-211ENST00000540408 NDRG2Q9UN36 371 aaKnown RBP13.67□□□□□ -0.22
COPS7A-211ENST00000540408 DNM3Q9UQ16 869 aa13.67□□□□□ -0.22
COPS7A-211ENST00000540408 INSL5Q9Y5Q6 135 aa13.67□□□□□ -0.22
COPS7A-211ENST00000540408 FANCMQ8IYD8 2048 aa13.67□□□□□ -0.22
COPS7A-211ENST00000540408 LILRB5O75023 590 aa13.66□□□□□ -0.22
COPS7A-211ENST00000540408 MCF2P10911 925 aa13.66□□□□□ -0.22
COPS7A-211ENST00000540408 KCNE1P15382 129 aa13.66□□□□□ -0.22
COPS7A-211ENST00000540408 PSMC3P17980 439 aa13.66□□□□□ -0.22
COPS7A-211ENST00000540408 MCM4P33991 863 aa13.66□□□□□ -0.22
COPS7A-211ENST00000540408 TRAPPC10P48553 1259 aa13.66□□□□□ -0.22
COPS7A-211ENST00000540408 SOX4Q06945 474 aaPredicted RBP13.66□□□□□ -0.22
COPS7A-211ENST00000540408 MTAPQ13126 283 aa13.66□□□□□ -0.22
COPS7A-211ENST00000540408 GRM2Q14416 872 aa13.66□□□□□ -0.22
COPS7A-211ENST00000540408 FAM78AQ5JUQ0 283 aa13.66□□□□□ -0.22
COPS7A-211ENST00000540408 PRSS36Q5K4E3 855 aa13.66□□□□□ -0.22
COPS7A-211ENST00000540408 ZNF280DQ6N043 979 aa13.66□□□□□ -0.22
COPS7A-211ENST00000540408 TSSK4Q6SA08 328 aa13.66□□□□□ -0.22
COPS7A-211ENST00000540408 CEP120Q8N960 986 aa13.66□□□□□ -0.22
COPS7A-211ENST00000540408 SNX29Q8TEQ0 813 aa13.66□□□□□ -0.22
COPS7A-211ENST00000540408 FAM3CQ92520 227 aa13.66□□□□□ -0.22
COPS7A-211ENST00000540408 NELL1Q92832 810 aa13.66□□□□□ -0.22
COPS7A-211ENST00000540408 SMARCD2Q92925 531 aa13.66□□□□□ -0.22
COPS7A-211ENST00000540408 ASB16Q96NS5 453 aa13.66□□□□□ -0.22
COPS7A-211ENST00000540408 LLPHQ9BRT6 129 aaKnown RBP13.66□□□□□ -0.22
COPS7A-211ENST00000540408 GPR88Q9GZN0 384 aa13.66□□□□□ -0.22
COPS7A-211ENST00000540408 C17orf75Q9HAS0 396 aa13.66□□□□□ -0.22
COPS7A-211ENST00000540408 TRPV5Q9NQA5 729 aa13.66□□□□□ -0.22
COPS7A-211ENST00000540408 FBXL5Q9UKA1 691 aa13.66□□□□□ -0.22
COPS7A-211ENST00000540408 CDV3Q9UKY7 258 aaKnown RBP13.66□□□□□ -0.22
COPS7A-211ENST00000540408 ZNF292O60281 2723 aa13.66□□□□□ -0.22
COPS7A-211ENST00000540408 VWA8A3KMH1 1905 aa13.66□□□□□ -0.22
COPS7A-211ENST00000540408 ZNF263O14978 683 aa13.65□□□□□ -0.22
COPS7A-211ENST00000540408 MYL4P12829 197 aa13.65□□□□□ -0.22
COPS7A-211ENST00000540408 CPB1P15086 417 aa13.65□□□□□ -0.22
COPS7A-211ENST00000540408 GDI1P31150 447 aa13.65□□□□□ -0.22
COPS7A-211ENST00000540408 STRN3Q13033 797 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms