RNA–Protein interactions for RNA: ENST00000540013.5

MRE11-209, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 1 (best) BASIC

Gene MRE11, Length 1,212 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-209ENST00000540013 H7C1D1 291 aa6.94□□□□□ -1.3
MRE11-209ENST00000540013 EYA2O00167 538 aa6.94□□□□□ -1.3
MRE11-209ENST00000540013 TRAF5O00463 557 aa6.94□□□□□ -1.3
MRE11-209ENST00000540013 TUSC2O75896 110 aa6.94□□□□□ -1.3
MRE11-209ENST00000540013 ATP2A2P16615 1042 aaKnown RBP6.94□□□□□ -1.3
MRE11-209ENST00000540013 BLMHQ13867 455 aa6.94□□□□□ -1.3
MRE11-209ENST00000540013 ZNF174Q15697 407 aa6.94□□□□□ -1.3
MRE11-209ENST00000540013 DDB1Q16531 1140 aa6.94□□□□□ -1.3
MRE11-209ENST00000540013 CD276Q5ZPR3 534 aa6.94□□□□□ -1.3
MRE11-209ENST00000540013 FASTKD5Q7L8L6 764 aaKnown RBP6.94□□□□□ -1.3
MRE11-209ENST00000540013 SIAH1Q8IUQ4 282 aa6.94□□□□□ -1.3
MRE11-209ENST00000540013 COLGALT2Q8IYK4 626 aa6.94□□□□□ -1.3
MRE11-209ENST00000540013 LINC01356Q8N9X3 169 aa6.94□□□□□ -1.3
MRE11-209ENST00000540013 USP13Q92995 863 aaPredicted RBP6.94□□□□□ -1.3
MRE11-209ENST00000540013 TBC1D20Q96BZ9 403 aa6.94□□□□□ -1.3
MRE11-209ENST00000540013 CENPOQ9BU64 300 aa6.94□□□□□ -1.3
MRE11-209ENST00000540013 PRKRIP1Q9H875 184 aaPredicted RBP6.94□□□□□ -1.3
MRE11-209ENST00000540013 RGS17Q9UGC6 210 aaPredicted RBP6.94□□□□□ -1.3
MRE11-209ENST00000540013 TMEM98Q9Y2Y6 226 aa6.94□□□□□ -1.3
MRE11-209ENST00000540013 B3GALT1Q9Y5Z6 326 aa6.94□□□□□ -1.3
MRE11-209ENST00000540013 SPATA31A6Q5VVP1 1343 aa6.94□□□□□ -1.3
MRE11-209ENST00000540013 CDC42BPGQ6DT37 1551 aa6.94□□□□□ -1.3
MRE11-209ENST00000540013 LRPPRCP42704 1394 aaKnown RBP6.94□□□□□ -1.3
MRE11-209ENST00000540013 NRXN1Q9ULB1 1477 aa6.93□□□□□ -1.3
MRE11-209ENST00000540013 A0A087WV62 115 aa6.93□□□□□ -1.3
MRE11-209ENST00000540013 PTPDC1A2A3K4 754 aa6.93□□□□□ -1.3
MRE11-209ENST00000540013 SH3D21A4FU49 640 aa6.93□□□□□ -1.3
MRE11-209ENST00000540013 RRN3P2A6NIE6 340 aa6.93□□□□□ -1.3
MRE11-209ENST00000540013 FAM90A27PA6NNH2 459 aa6.93□□□□□ -1.3
MRE11-209ENST00000540013 H3BML4 177 aa6.93□□□□□ -1.3
MRE11-209ENST00000540013 GOLIM4O00461 696 aa6.93□□□□□ -1.3
MRE11-209ENST00000540013 SCDO00767 359 aa6.93□□□□□ -1.3
MRE11-209ENST00000540013 AREL1O15033 823 aa6.93□□□□□ -1.3
MRE11-209ENST00000540013 MTA2O94776 668 aa6.93□□□□□ -1.3
MRE11-209ENST00000540013 PLA2G1BP04054 148 aaKnown RBP6.93□□□□□ -1.3
MRE11-209ENST00000540013 CHGBP05060 677 aa6.93□□□□□ -1.3
MRE11-209ENST00000540013 CFPP27918 469 aa6.93□□□□□ -1.3
MRE11-209ENST00000540013 SDHAP31040 664 aa6.93□□□□□ -1.3
MRE11-209ENST00000540013 TSPAN7P41732 249 aa6.93□□□□□ -1.3
MRE11-209ENST00000540013 ICA1Q05084 483 aa6.93□□□□□ -1.3
MRE11-209ENST00000540013 DBPQ10586 325 aaPredicted RBP6.93□□□□□ -1.3
MRE11-209ENST00000540013 ACAP2Q15057 778 aa6.93□□□□□ -1.3
MRE11-209ENST00000540013 CLUL1Q15846 466 aa6.93□□□□□ -1.3
MRE11-209ENST00000540013 PDZD4Q76G19 769 aaPredicted RBP6.93□□□□□ -1.3
MRE11-209ENST00000540013 GALNT5Q7Z7M9 940 aa6.93□□□□□ -1.3
MRE11-209ENST00000540013 CILP2Q8IUL8 1156 aa6.93□□□□□ -1.3
MRE11-209ENST00000540013 KIAA0319LQ8IZA0 1049 aa6.93□□□□□ -1.3
MRE11-209ENST00000540013 IGDCC4Q8TDY8 1250 aa6.93□□□□□ -1.3
MRE11-209ENST00000540013 MAP3K14Q99558 947 aa6.93□□□□□ -1.3
MRE11-209ENST00000540013 GTPBP4Q9BZE4 634 aaKnown RBP6.93□□□□□ -1.3
MRE11-209ENST00000540013 NUP62CLQ9H1M0 184 aa6.93□□□□□ -1.3
MRE11-209ENST00000540013 BHMT2Q9H2M3 363 aa6.93□□□□□ -1.3
MRE11-209ENST00000540013 PCIF1Q9H4Z3 704 aa6.93□□□□□ -1.3
MRE11-209ENST00000540013 ACSS2Q9NR19 701 aa6.93□□□□□ -1.3
MRE11-209ENST00000540013 HELLSQ9NRZ9 838 aa6.93□□□□□ -1.3
MRE11-209ENST00000540013 LRP6O75581 1613 aa6.93□□□□□ -1.3
MRE11-209ENST00000540013 ABCC11Q96J66 1382 aa6.93□□□□□ -1.3
MRE11-209ENST00000540013 YTHDC2Q9H6S0 1430 aaKnown RBP6.93□□□□□ -1.3
MRE11-209ENST00000540013 ACOT7O00154 380 aa6.92□□□□□ -1.3
MRE11-209ENST00000540013 PLOD3O60568 738 aa6.92□□□□□ -1.3
MRE11-209ENST00000540013 H2AFYO75367 372 aaKnown RBP6.92□□□□□ -1.3
MRE11-209ENST00000540013 C4BPAP04003 597 aaKnown RBP6.92□□□□□ -1.3
MRE11-209ENST00000540013 CYP17A1P05093 508 aa6.92□□□□□ -1.3
MRE11-209ENST00000540013 POU2F2P09086 479 aa6.92□□□□□ -1.3
MRE11-209ENST00000540013 FAM200BP0CF97 657 aa6.92□□□□□ -1.3
MRE11-209ENST00000540013 SMARCA1P28370 1054 aa6.92□□□□□ -1.3
MRE11-209ENST00000540013 THBS2P35442 1172 aa6.92□□□□□ -1.3
MRE11-209ENST00000540013 PRIM2P49643 509 aa6.92□□□□□ -1.3
MRE11-209ENST00000540013 CLK1P49759 484 aaKnown RBP6.92□□□□□ -1.3
MRE11-209ENST00000540013 ADKP55263 362 aaKnown RBP6.92□□□□□ -1.3
MRE11-209ENST00000540013 PFKPQ01813 784 aa6.92□□□□□ -1.3
MRE11-209ENST00000540013 ROR1Q01973 937 aa6.92□□□□□ -1.3
MRE11-209ENST00000540013 CCDC38Q502W7 563 aa6.92□□□□□ -1.3
MRE11-209ENST00000540013 SPOCD1Q6ZMY3 1216 aa6.92□□□□□ -1.3
MRE11-209ENST00000540013 GRAMD1CQ8IYS0 662 aa6.92□□□□□ -1.3
MRE11-209ENST00000540013 MIER2Q8N344 545 aa6.92□□□□□ -1.3
MRE11-209ENST00000540013 DTX3Q8N9I9 347 aa6.92□□□□□ -1.3
MRE11-209ENST00000540013 SSH1Q8WYL5 1049 aa6.92□□□□□ -1.3
MRE11-209ENST00000540013 DLG3Q92796 817 aa6.92□□□□□ -1.3
MRE11-209ENST00000540013 NOX5Q96PH1 765 aa6.92□□□□□ -1.3
MRE11-209ENST00000540013 LSM14BQ9BX40 385 aaKnown RBP6.92□□□□□ -1.3
MRE11-209ENST00000540013 ATP6V0A4Q9HBG4 840 aa6.92□□□□□ -1.3
MRE11-209ENST00000540013 DMRT3Q9NQL9 472 aa6.92□□□□□ -1.3
MRE11-209ENST00000540013 STK26Q9P289 416 aa6.92□□□□□ -1.3
MRE11-209ENST00000540013 CDC23Q9UJX2 597 aa6.92□□□□□ -1.3
MRE11-209ENST00000540013 RGPD8O14715 1765 aaPredicted RBP6.92□□□□□ -1.3
MRE11-209ENST00000540013 FMN2Q9NZ56 1722 aa6.91□□□□□ -1.3
MRE11-209ENST00000540013 ANKRD18BA2A2Z9 1011 aa6.91□□□□□ -1.3
MRE11-209ENST00000540013 ZNF839A8K0R7 811 aa6.91□□□□□ -1.3
MRE11-209ENST00000540013 KCNK3O14649 394 aa6.91□□□□□ -1.3
MRE11-209ENST00000540013 FOXP2O15409 715 aa6.91□□□□□ -1.3
MRE11-209ENST00000540013 GFPT2O94808 682 aa6.91□□□□□ -1.3
MRE11-209ENST00000540013 DDX58O95786 925 aaKnown RBP6.91□□□□□ -1.3
MRE11-209ENST00000540013 ABCB4P21439 1286 aa6.91□□□□□ -1.3
MRE11-209ENST00000540013 RPL13P26373 211 aaKnown RBP6.91□□□□□ -1.3
MRE11-209ENST00000540013 PEX2P28328 305 aa6.91□□□□□ -1.3
MRE11-209ENST00000540013 ADD2P35612 726 aa6.91□□□□□ -1.3
MRE11-209ENST00000540013 GPR3P46089 330 aa6.91□□□□□ -1.3
MRE11-209ENST00000540013 FNTBP49356 437 aa6.91□□□□□ -1.3
MRE11-209ENST00000540013 CACNB3P54284 484 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms