RNA–Protein interactions for RNA: ENST00000539784.1

TSPAN9-IT1-201, TSPAN9 intronic transcript 1, humanhuman

TSL 4 BASIC

Gene TSPAN9-IT1, Length 562 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-IT1-201ENST00000539784 CLTAP09496 248 aa13.9□□□□□ -0.18
TSPAN9-IT1-201ENST00000539784 FSHRP23945 695 aa13.9□□□□□ -0.18
TSPAN9-IT1-201ENST00000539784 AVPR2P30518 371 aa13.9□□□□□ -0.18
TSPAN9-IT1-201ENST00000539784 DDIT3P35638 169 aa13.9□□□□□ -0.18
TSPAN9-IT1-201ENST00000539784 TXLNAP40222 546 aa13.9□□□□□ -0.18
TSPAN9-IT1-201ENST00000539784 ZNF131P52739 623 aa13.9□□□□□ -0.18
TSPAN9-IT1-201ENST00000539784 NHLH1Q02575 133 aa13.9□□□□□ -0.18
TSPAN9-IT1-201ENST00000539784 PPP2R3AQ06190 1150 aa13.9□□□□□ -0.18
TSPAN9-IT1-201ENST00000539784 RAB33AQ14088 237 aa13.9□□□□□ -0.18
TSPAN9-IT1-201ENST00000539784 VARS2Q5ST30 1063 aaKnown RBP13.9□□□□□ -0.18
TSPAN9-IT1-201ENST00000539784 ZBTB41Q5SVQ8 909 aa13.9□□□□□ -0.18
TSPAN9-IT1-201ENST00000539784 AXDND1Q5T1B0 1012 aaPredicted RBP13.9□□□□□ -0.18
TSPAN9-IT1-201ENST00000539784 KRI1Q8N9T8 703 aaKnown RBP13.9□□□□□ -0.18
TSPAN9-IT1-201ENST00000539784 INTS4Q96HW7 963 aaKnown RBP13.9□□□□□ -0.18
TSPAN9-IT1-201ENST00000539784 RHOBTB2Q9BYZ6 727 aa13.9□□□□□ -0.18
TSPAN9-IT1-201ENST00000539784 FBXL21Q9UKT6 434 aa13.9□□□□□ -0.18
TSPAN9-IT1-201ENST00000539784 MTMR6Q9Y217 621 aa13.9□□□□□ -0.18
TSPAN9-IT1-201ENST00000539784 SRPRBQ9Y5M8 271 aaKnown RBP13.9□□□□□ -0.18
TSPAN9-IT1-201ENST00000539784 MYO10Q9HD67 2058 aa13.9□□□□□ -0.18
TSPAN9-IT1-201ENST00000539784 TRIOO75962 3097 aa13.9□□□□□ -0.18
TSPAN9-IT1-201ENST00000539784 CITO14578 2027 aa13.9□□□□□ -0.18
TSPAN9-IT1-201ENST00000539784 LACTBL1A8MY62 500 aa13.89□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 TULP1O00294 542 aaPredicted RBP13.89□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 STX6O43752 255 aa13.89□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 XYLBO75191 536 aa13.89□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 HNRNPA1P09651 372 aaKnown RBP eCLIP13.89□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 RPL9P32969 192 aaKnown RBP13.89□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 ZC2HC1CQ53FD0 456 aaPredicted RBP13.89□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 FOXD4L5Q5VV16 416 aaPredicted RBP13.89□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 RRAGBQ5VZM2 374 aa13.89□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 SFR1Q86XK3 245 aa13.89□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 FOXD4L4Q8WXT5 416 aaPredicted RBP13.89□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 USP28Q96RU2 1077 aa13.89□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 MSTO1Q9BUK6 570 aa13.89□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 PANK2Q9BZ23 570 aa13.89□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 RPF1Q9H9Y2 349 aaKnown RBP13.89□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 HCFC1R1Q9NWW0 138 aa13.89□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 IGSF9Q9P2J2 1179 aa13.89□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 EPS15L1Q9UBC2 864 aa13.89□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 DUSP12Q9UNI6 340 aa13.89□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 BACE2Q9Y5Z0 518 aa13.89□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 KMT2EQ8IZD2 1858 aa13.89□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 TTC26A0AVF1 554 aa13.88□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 TISP43B9A030 160 aa13.88□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 H7C4K7 107 aa13.88□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 OGTO15294 1046 aa13.88□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 CFHP08603 1231 aa13.88□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 LAMP2P13473 410 aa13.88□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 GUCY2FP51841 1108 aa13.88□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 ROR1Q01973 937 aa13.88□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 ENOX2Q16206 610 aaKnown RBP13.88□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 CTXN3Q4LDR2 81 aa13.88□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 SLC39A4Q6P5W5 647 aa13.88□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 ALYREFQ86V81 257 aaKnown RBP13.88□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 FLCNQ8NFG4 579 aa13.88□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 SUSD3Q96L08 255 aa13.88□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.88□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 TBC1D7Q9P0N9 293 aa13.88□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 STK17AQ9UEE5 414 aa13.88□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 WDR27A2RRH5 827 aa13.87□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 ANKRD63C9JTQ0 380 aa13.87□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 PRRG1O14668 218 aa13.87□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 SYN3O14994 580 aa13.87□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 PAPLNO95428 1278 aa13.87□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 PIGRP01833 764 aa13.87□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 HOXA9P31269 272 aa13.87□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 HOXD11P31277 338 aaPredicted RBP13.87□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 ELF1P32519 619 aa13.87□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 PTPN5P54829 565 aa13.87□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 GTF2BQ00403 316 aa13.87□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 SV2BQ7L1I2 683 aa13.87□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 MAP4K3Q8IVH8 894 aa13.87□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 SIX5Q8N196 739 aa13.87□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 ING5Q8WYH8 240 aa13.87□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 DDX12PQ92771 950 aa13.87□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 FIZ1Q96SL8 496 aa13.87□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 IKZF4Q9H2S9 585 aa13.87□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 ZSCAN16Q9H4T2 348 aaPredicted RBP13.87□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 PLEKHA5Q9HAU0 1116 aa13.87□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 FBXL5Q9UKA1 691 aa13.87□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 UBQLN1Q9UMX0 589 aaKnown RBP13.87□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 TIMM13Q9Y5L4 95 aaPredicted RBP13.87□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 NUMBLQ9Y6R0 609 aa13.87□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 ZNF318Q5VUA4 2279 aa13.87□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 PDCD11Q14690 1871 aaKnown RBP13.87□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 A0A0B4J269 797 aa13.86□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 MYMKA6NI61 221 aa13.86□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 STK25O00506 426 aa13.86□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 XPOTO43592 962 aaKnown RBP13.86□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 FAM189A1O60320 539 aa13.86□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 LRG1P02750 347 aa13.86□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 HSP90AA1P07900 732 aaKnown RBP13.86□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 IDEP14735 1019 aa13.86□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 CPB1P15086 417 aa13.86□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 SCP2P22307 547 aa13.86□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 RFX1P22670 979 aa13.86□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 STAT6P42226 847 aa13.86□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 ACOT2P49753 483 aa13.86□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 SLC39A14Q15043 492 aa13.86□□□□□ -0.19
TSPAN9-IT1-201ENST00000539784 STK38Q15208 465 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms